EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000028293 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 413 bases
Position: chrKV390081.1:94829-95241
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000020892	zf-U1	PF06220.12	8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000038383	-	393	-	ENSCCAP00000020892	130 (aa)	-	A0A2K5QYD1

Gene Model

Click here to download ENSCCAG00000028293's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000028293's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000028293	-	98	63.462	ENSCCAG00000022751	-	95	63.462
ENSCCAG00000028293	-	100	67.296	ENSCCAG00000036059	-	89	67.296
ENSCCAG00000028293	-	61	54.430	ENSCCAG00000022209	-	95	51.282

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000028293	-	63	86.585	ENSG00000124562	SNRPC	100	69.811	Homo_sapiens
ENSCCAG00000028293	-	63	86.585	ENSAMEG00000000963	SNRPC	87	68.790	Ailuropoda_melanoleuca
ENSCCAG00000028293	-	58	86.842	ENSACAG00000015721	SNRPC	87	68.153	Anolis_carolinensis
ENSCCAG00000028293	-	100	66.667	ENSANAG00000019157	-	100	66.667	Aotus_nancymaae
ENSCCAG00000028293	-	63	86.585	ENSANAG00000019696	-	100	69.811	Aotus_nancymaae
ENSCCAG00000028293	-	99	67.089	ENSANAG00000020588	-	92	67.089	Aotus_nancymaae
ENSCCAG00000028293	-	100	62.667	ENSANAG00000021444	-	100	62.667	Aotus_nancymaae
ENSCCAG00000028293	-	100	64.000	ENSANAG00000021026	-	100	64.000	Aotus_nancymaae
ENSCCAG00000028293	-	100	69.182	ENSANAG00000007843	-	100	69.182	Aotus_nancymaae
ENSCCAG00000028293	-	100	73.333	ENSANAG00000019726	-	92	73.333	Aotus_nancymaae
ENSCCAG00000028293	-	100	59.748	ENSAMXG00000032641	snrpc	100	59.184	Astyanax_mexicanus
ENSCCAG00000028293	-	100	60.112	ENSBTAG00000024549	SNRPC	100	69.811	Bos_taurus
ENSCCAG00000028293	-	63	86.585	ENSCJAG00000015321	-	100	69.811	Callithrix_jacchus
ENSCCAG00000028293	-	100	69.182	ENSCJAG00000043055	-	100	69.182	Callithrix_jacchus
ENSCCAG00000028293	-	59	87.013	ENSCJAG00000041822	-	100	67.925	Callithrix_jacchus
ENSCCAG00000028293	-	59	88.312	ENSCAFG00000028988	-	100	68.125	Canis_familiaris
ENSCCAG00000028293	-	59	89.610	ENSCAFG00000001231	-	90	69.841	Canis_familiaris
ENSCCAG00000028293	-	100	55.975	ENSCAFG00000025525	-	100	57.233	Canis_familiaris
ENSCCAG00000028293	-	100	67.296	ENSCAFG00000031775	-	100	67.296	Canis_familiaris
ENSCCAG00000028293	-	98	59.236	ENSCAFG00020009944	-	90	59.236	Canis_lupus_dingo
ENSCCAG00000028293	-	59	89.610	ENSCAFG00020005945	-	100	69.811	Canis_lupus_dingo
ENSCCAG00000028293	-	100	67.296	ENSCAFG00020017383	-	100	67.296	Canis_lupus_dingo
ENSCCAG00000028293	-	100	60.112	ENSCAFG00020026577	-	100	62.360	Canis_lupus_dingo
ENSCCAG00000028293	-	63	85.366	ENSCAFG00020005758	-	99	66.879	Canis_lupus_dingo
ENSCCAG00000028293	-	100	59.091	ENSCHIG00000005039	-	100	59.211	Capra_hircus
ENSCCAG00000028293	-	59	88.312	ENSCHIG00000012087	-	100	69.182	Capra_hircus
ENSCCAG00000028293	-	100	55.346	ENSTSYG00000025721	-	100	55.346	Carlito_syrichta
ENSCCAG00000028293	-	78	66.154	ENSTSYG00000029745	-	78	64.103	Carlito_syrichta
ENSCCAG00000028293	-	59	89.610	ENSTSYG00000011216	-	100	69.811	Carlito_syrichta
ENSCCAG00000028293	-	50	89.231	ENSCAPG00000005161	SNRPC	100	66.901	Cavia_aperea
ENSCCAG00000028293	-	59	89.610	ENSCPOG00000008563	SNRPC	100	69.811	Cavia_porcellus
ENSCCAG00000028293	-	63	86.585	ENSCATG00000035787	SNRPC	100	69.811	Cercocebus_atys
ENSCCAG00000028293	-	59	89.610	ENSCLAG00000016920	SNRPC	100	69.811	Chinchilla_lanigera
ENSCCAG00000028293	-	96	62.400	ENSCLAG00000010242	-	96	57.325	Chinchilla_lanigera
ENSCCAG00000028293	-	100	60.112	ENSCSAG00000009821	SNRPC	100	62.360	Chlorocebus_sabaeus
ENSCCAG00000028293	-	59	89.610	ENSCPBG00000027142	SNRPC	100	67.296	Chrysemys_picta_bellii
ENSCCAG00000028293	-	59	89.610	ENSCANG00000028035	SNRPC	100	69.811	Colobus_angolensis_palliatus
ENSCCAG00000028293	-	59	64.935	ENSCGRG00001021483	-	100	58.491	Cricetulus_griseus_chok1gshd
ENSCCAG00000028293	-	63	86.585	ENSCGRG00000005005	Snrpc	99	68.790	Cricetulus_griseus_crigri
ENSCCAG00000028293	-	100	58.491	ENSDARG00000009871	snrpc	100	60.377	Danio_rerio
ENSCCAG00000028293	-	64	90.361	ENSDNOG00000042403	-	90	69.841	Dasypus_novemcinctus
ENSCCAG00000028293	-	59	88.312	ENSDNOG00000034699	-	99	69.182	Dasypus_novemcinctus
ENSCCAG00000028293	-	65	87.059	ENSDORG00000005955	Snrpc	66	66.225	Dipodomys_ordii
ENSCCAG00000028293	-	59	87.013	ENSDORG00000029823	-	100	71.533	Dipodomys_ordii
ENSCCAG00000028293	-	59	85.714	ENSETEG00000008268	-	100	66.667	Echinops_telfairi
ENSCCAG00000028293	-	64	85.542	ENSETEG00000008756	-	75	84.416	Echinops_telfairi
ENSCCAG00000028293	-	98	62.821	ENSETEG00000011265	-	100	66.026	Echinops_telfairi
ENSCCAG00000028293	-	91	47.059	ENSEBUG00000011445	snrpc	95	45.333	Eptatretus_burgeri
ENSCCAG00000028293	-	100	60.112	ENSEASG00005021007	SNRPC	100	69.811	Equus_asinus_asinus
ENSCCAG00000028293	-	100	60.112	ENSECAG00000026848	SNRPC	100	69.811	Equus_caballus
ENSCCAG00000028293	-	100	57.639	ENSELUG00000020489	snrpc	100	60.000	Esox_lucius
ENSCCAG00000028293	-	100	59.119	ENSELUG00000000815	SNRPC	100	60.625	Esox_lucius
ENSCCAG00000028293	-	100	65.409	ENSFCAG00000031775	-	88	65.409	Felis_catus
ENSCCAG00000028293	-	63	86.585	ENSFCAG00000044077	-	100	69.811	Felis_catus
ENSCCAG00000028293	-	58	89.474	ENSFALG00000003756	SNRPC	100	68.553	Ficedula_albicollis
ENSCCAG00000028293	-	59	89.610	ENSFDAG00000018111	SNRPC	100	69.811	Fukomys_damarensis
ENSCCAG00000028293	-	58	88.312	ENSGALG00000002773	SNRPC	100	68.125	Gallus_gallus
ENSCCAG00000028293	-	59	89.610	ENSGAGG00000003063	SNRPC	100	67.296	Gopherus_agassizii
ENSCCAG00000028293	-	59	89.610	ENSGGOG00000012499	SNRPC	100	69.811	Gorilla_gorilla
ENSCCAG00000028293	-	51	81.818	ENSHGLG00000017741	-	100	55.346	Heterocephalus_glaber_female
ENSCCAG00000028293	-	88	66.667	ENSHGLG00000005871	-	100	66.197	Heterocephalus_glaber_female
ENSCCAG00000028293	-	61	89.873	ENSHGLG00000013981	SNRPC	100	69.811	Heterocephalus_glaber_female
ENSCCAG00000028293	-	51	81.818	ENSHGLG00100010786	-	100	55.346	Heterocephalus_glaber_male
ENSCCAG00000028293	-	61	89.873	ENSHGLG00100009478	SNRPC	100	69.811	Heterocephalus_glaber_male
ENSCCAG00000028293	-	100	66.667	ENSHGLG00100017764	-	100	66.038	Heterocephalus_glaber_male
ENSCCAG00000028293	-	100	59.748	ENSIPUG00000024851	snrpc	100	61.006	Ictalurus_punctatus
ENSCCAG00000028293	-	59	89.610	ENSSTOG00000013786	SNRPC	100	69.811	Ictidomys_tridecemlineatus
ENSCCAG00000028293	-	59	89.610	ENSLAFG00000013534	SNRPC	100	69.811	Loxodonta_africana
ENSCCAG00000028293	-	59	89.610	ENSMFAG00000030525	-	100	70.440	Macaca_fascicularis
ENSCCAG00000028293	-	59	89.610	ENSMFAG00000031764	-	100	69.811	Macaca_fascicularis
ENSCCAG00000028293	-	100	72.667	ENSMMUG00000039415	-	100	72.667	Macaca_mulatta
ENSCCAG00000028293	-	63	87.805	ENSMMUG00000000869	-	100	72.078	Macaca_mulatta
ENSCCAG00000028293	-	100	64.151	ENSMMUG00000045425	-	100	64.151	Macaca_mulatta
ENSCCAG00000028293	-	63	86.585	ENSMNEG00000032731	SNRPC	100	69.811	Macaca_nemestrina
ENSCCAG00000028293	-	63	86.585	ENSMLEG00000033916	-	100	69.811	Mandrillus_leucophaeus
ENSCCAG00000028293	-	96	54.795	ENSMLEG00000039724	-	81	58.333	Mandrillus_leucophaeus
ENSCCAG00000028293	-	97	65.806	ENSMLEG00000040224	-	89	65.806	Mandrillus_leucophaeus
ENSCCAG00000028293	-	58	84.211	ENSMGAG00000006054	SNRPC	100	67.925	Meleagris_gallopavo
ENSCCAG00000028293	-	100	70.440	ENSMICG00000032183	-	100	70.440	Microcebus_murinus
ENSCCAG00000028293	-	100	70.833	ENSMICG00000009130	-	100	77.083	Microcebus_murinus
ENSCCAG00000028293	-	98	68.919	ENSMICG00000036552	-	87	68.919	Microcebus_murinus
ENSCCAG00000028293	-	59	89.610	ENSMICG00000007339	-	100	67.089	Microcebus_murinus
ENSCCAG00000028293	-	59	84.416	ENSMODG00000025263	-	100	71.739	Monodelphis_domestica
ENSCCAG00000028293	-	59	90.909	ENSMODG00000013904	-	100	69.811	Monodelphis_domestica
ENSCCAG00000028293	-	100	59.864	ENSMALG00000001197	snrpc	100	61.905	Monopterus_albus
ENSCCAG00000028293	-	61	89.873	ENSMUSG00000024217	Snrpc	100	69.811	Mus_musculus
ENSCCAG00000028293	-	59	89.610	MGP_SPRETEiJ_G0022221	-	100	68.939	Mus_spretus
ENSCCAG00000028293	-	63	86.585	ENSMPUG00000003210	SNRPC	99	68.790	Mustela_putorius_furo
ENSCCAG00000028293	-	63	86.585	ENSMLUG00000002488	SNRPC	99	68.790	Myotis_lucifugus
ENSCCAG00000028293	-	60	89.744	ENSNLEG00000034810	SNRPC	100	69.811	Nomascus_leucogenys
ENSCCAG00000028293	-	50	90.769	ENSMEUG00000009300	SNRPC	100	67.606	Notamacropus_eugenii
ENSCCAG00000028293	-	59	89.610	ENSODEG00000020370	-	100	69.811	Octodon_degus
ENSCCAG00000028293	-	59	89.610	ENSODEG00000018985	-	100	69.811	Octodon_degus
ENSCCAG00000028293	-	59	88.312	ENSODEG00000019633	-	100	69.182	Octodon_degus
ENSCCAG00000028293	-	59	88.312	ENSODEG00000020201	-	100	69.182	Octodon_degus
ENSCCAG00000028293	-	59	89.610	ENSODEG00000017080	-	100	69.811	Octodon_degus
ENSCCAG00000028293	-	79	65.909	ENSODEG00000006008	-	100	66.906	Octodon_degus
ENSCCAG00000028293	-	71	85.870	ENSOCUG00000023292	-	100	68.553	Oryctolagus_cuniculus
ENSCCAG00000028293	-	59	88.312	ENSOCUG00000026430	-	99	69.182	Oryctolagus_cuniculus
ENSCCAG00000028293	-	59	89.610	ENSOCUG00000026668	-	100	69.811	Oryctolagus_cuniculus
ENSCCAG00000028293	-	82	52.336	ENSORLG00000007308	snrpc	97	60.000	Oryzias_latipes
ENSCCAG00000028293	-	58	75.000	ENSOGAG00000028405	-	99	60.784	Otolemur_garnettii
ENSCCAG00000028293	-	59	88.312	ENSOGAG00000026269	-	100	68.553	Otolemur_garnettii
ENSCCAG00000028293	-	60	89.744	ENSOGAG00000008755	-	88	68.790	Otolemur_garnettii
ENSCCAG00000028293	-	59	89.610	ENSOARG00000010823	SNRPC	100	69.811	Ovis_aries
ENSCCAG00000028293	-	59	89.610	ENSPPAG00000043871	SNRPC	100	69.811	Pan_paniscus
ENSCCAG00000028293	-	100	60.150	ENSPPRG00000010967	-	89	59.854	Panthera_pardus
ENSCCAG00000028293	-	95	44.138	ENSPPRG00000016017	-	86	44.138	Panthera_pardus
ENSCCAG00000028293	-	63	86.585	ENSPPRG00000008647	-	100	69.811	Panthera_pardus
ENSCCAG00000028293	-	63	86.585	ENSPTIG00000021867	-	100	69.811	Panthera_tigris_altaica
ENSCCAG00000028293	-	95	65.079	ENSPTIG00000013329	-	82	66.667	Panthera_tigris_altaica
ENSCCAG00000028293	-	100	48.201	ENSPTIG00000011880	-	88	52.308	Panthera_tigris_altaica
ENSCCAG00000028293	-	59	89.610	ENSPTRG00000018070	SNRPC	100	69.811	Pan_troglodytes
ENSCCAG00000028293	-	100	63.522	ENSPANG00000018228	-	94	63.522	Papio_anubis
ENSCCAG00000028293	-	63	86.585	ENSPANG00000022802	-	100	69.811	Papio_anubis
ENSCCAG00000028293	-	100	58.750	ENSPKIG00000001671	SNRPC	100	58.491	Paramormyrops_kingsleyae
ENSCCAG00000028293	-	71	78.261	ENSPKIG00000003136	snrpc	100	62.581	Paramormyrops_kingsleyae
ENSCCAG00000028293	-	58	89.333	ENSPSIG00000004876	SNRPC	77	66.879	Pelodiscus_sinensis
ENSCCAG00000028293	-	98	57.746	ENSPMGG00000022162	snrpc	100	61.268	Periophthalmus_magnuspinnatus
ENSCCAG00000028293	-	100	68.212	ENSPEMG00000002763	-	100	70.199	Peromyscus_maniculatus_bairdii
ENSCCAG00000028293	-	59	76.623	ENSPMAG00000000602	snrpc	98	55.333	Petromyzon_marinus
ENSCCAG00000028293	-	98	52.448	ENSPREG00000013017	snrpc	79	54.110	Poecilia_reticulata
ENSCCAG00000028293	-	64	90.361	ENSPPYG00000029902	-	78	89.610	Pongo_abelii
ENSCCAG00000028293	-	63	86.585	ENSPCAG00000016885	SNRPC	90	68.790	Procavia_capensis
ENSCCAG00000028293	-	63	86.585	ENSPCOG00000004904	SNRPC	100	69.811	Propithecus_coquereli
ENSCCAG00000028293	-	63	85.366	ENSPVAG00000015597	SNRPC	87	68.153	Pteropus_vampyrus
ENSCCAG00000028293	-	64	65.060	ENSPNYG00000004900	snrpc	100	61.240	Pundamilia_nyererei
ENSCCAG00000028293	-	100	59.494	ENSPNAG00000012799	snrpc	100	59.748	Pygocentrus_nattereri
ENSCCAG00000028293	-	59	89.610	ENSRBIG00000014819	-	100	69.811	Rhinopithecus_bieti
ENSCCAG00000028293	-	59	89.610	ENSRBIG00000022998	-	100	69.811	Rhinopithecus_bieti
ENSCCAG00000028293	-	100	64.780	ENSRBIG00000036353	-	83	64.780	Rhinopithecus_bieti
ENSCCAG00000028293	-	63	86.585	ENSRBIG00000037567	-	100	69.811	Rhinopithecus_bieti
ENSCCAG00000028293	-	60	89.744	ENSRROG00000041300	SNRPC	100	69.811	Rhinopithecus_roxellana
ENSCCAG00000028293	-	98	65.333	ENSSBOG00000023189	-	90	65.333	Saimiri_boliviensis_boliviensis
ENSCCAG00000028293	-	98	70.922	ENSSBOG00000032882	-	93	70.922	Saimiri_boliviensis_boliviensis
ENSCCAG00000028293	-	60	89.744	ENSSBOG00000031528	-	100	69.811	Saimiri_boliviensis_boliviensis
ENSCCAG00000028293	-	94	59.155	ENSSBOG00000032361	-	100	59.155	Saimiri_boliviensis_boliviensis
ENSCCAG00000028293	-	62	90.000	ENSSHAG00000000945	-	87	69.427	Sarcophilus_harrisii
ENSCCAG00000028293	-	59	84.416	ENSSHAG00000002972	-	100	71.739	Sarcophilus_harrisii
ENSCCAG00000028293	-	71	79.570	ENSSFOG00015019150	snrpc	100	59.119	Scleropages_formosus
ENSCCAG00000028293	-	71	76.087	ENSSFOG00015022422	snrpc	100	59.873	Scleropages_formosus
ENSCCAG00000028293	-	64	87.952	ENSSARG00000008970	SNRPC	89	64.780	Sorex_araneus
ENSCCAG00000028293	-	58	89.474	ENSSPUG00000002502	SNRPC	100	69.182	Sphenodon_punctatus
ENSCCAG00000028293	-	100	60.112	ENSSSCG00000001531	SNRPC	100	69.811	Sus_scrofa
ENSCCAG00000028293	-	63	87.805	ENSTGUG00000001773	SNRPC	99	67.722	Taeniopygia_guttata
ENSCCAG00000028293	-	100	58.503	ENSTRUG00000021651	snrpc	100	63.265	Takifugu_rubripes
ENSCCAG00000028293	-	100	55.280	ENSTNIG00000018307	snrpc	100	54.545	Tetraodon_nigroviridis
ENSCCAG00000028293	-	98	66.667	ENSTBEG00000015356	-	100	68.794	Tupaia_belangeri
ENSCCAG00000028293	-	98	62.821	ENSTBEG00000013022	-	100	64.103	Tupaia_belangeri
ENSCCAG00000028293	-	63	86.585	ENSTTRG00000007827	SNRPC	86	68.790	Tursiops_truncatus
ENSCCAG00000028293	-	59	89.610	ENSUAMG00000014125	SNRPC	77	69.841	Ursus_americanus
ENSCCAG00000028293	-	51	89.394	ENSVPAG00000003106	SNRPC	79	62.676	Vicugna_pacos
ENSCCAG00000028293	-	96	62.987	ENSVVUG00000010467	-	87	67.949	Vulpes_vulpes
ENSCCAG00000028293	-	59	88.312	ENSVVUG00000021947	-	100	69.182	Vulpes_vulpes
ENSCCAG00000028293	-	59	88.312	ENSXETG00000024721	snrpc	100	64.780	Xenopus_tropicalis