EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000028463 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: probable tRNA pseudouridine synthase 2 pseudogene
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 1035 bases
Position: chrKV390054.1:359341-360375
Accession: 108295279
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000021277	TruB_N	PF01509.18	3e-27	1	1
ENSCCAP00000021271	TruB_N	PF01509.18	3.2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000038770	-	972	-	ENSCCAP00000021277	323 (aa)	-	A0A2K5QZG9
ENSCCAT00000038764	-	990	-	ENSCCAP00000021271	329 (aa)	-	A0A2K5QZF5

Gene Model

Click here to download ENSCCAG00000028463's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000028463's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000028463	-	97	93.231	ENSCCAG00000026531	-	98	93.231
ENSCCAG00000028463	-	86	30.345	ENSCCAG00000028842	TRUB1	71	30.345

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000028463	-	97	88.308	ENSG00000167112	TRUB2	98	88.308	Homo_sapiens
ENSCCAG00000028463	-	63	57.073	ENSAPOG00000015733	trub2	74	57.073	Acanthochromis_polyacanthus
ENSCCAG00000028463	-	85	41.637	ENSAPOG00000018284	-	78	58.779	Acanthochromis_polyacanthus
ENSCCAG00000028463	-	98	80.308	ENSAMEG00000015395	TRUB2	97	81.875	Ailuropoda_melanoleuca
ENSCCAG00000028463	-	85	51.246	ENSACIG00000016500	trub2	85	51.246	Amphilophus_citrinellus
ENSCCAG00000028463	-	85	54.448	ENSAOCG00000002330	trub2	82	54.448	Amphiprion_ocellaris
ENSCCAG00000028463	-	85	54.804	ENSAPEG00000013177	trub2	82	54.804	Amphiprion_percula
ENSCCAG00000028463	-	85	53.025	ENSATEG00000011371	trub2	88	53.025	Anabas_testudineus
ENSCCAG00000028463	-	89	58.131	ENSAPLG00000009254	TRUB2	97	57.679	Anas_platyrhynchos
ENSCCAG00000028463	-	88	63.918	ENSACAG00000007331	TRUB2	88	63.918	Anolis_carolinensis
ENSCCAG00000028463	-	92	93.115	ENSANAG00000036234	TRUB2	98	93.115	Aotus_nancymaae
ENSCCAG00000028463	-	84	51.439	ENSACLG00000010793	trub2	84	51.439	Astatotilapia_calliptera
ENSCCAG00000028463	-	98	50.459	ENSAMXG00000031679	trub2	80	54.839	Astyanax_mexicanus
ENSCCAG00000028463	-	53	81.503	ENSBTAG00000055269	-	78	81.503	Bos_taurus
ENSCCAG00000028463	-	97	92.615	ENSCJAG00000020009	TRUB2	98	92.615	Callithrix_jacchus
ENSCCAG00000028463	-	98	81.790	ENSCAFG00000020068	TRUB2	97	83.438	Canis_familiaris
ENSCCAG00000028463	-	51	84.884	ENSCAFG00020017325	-	97	84.884	Canis_lupus_dingo
ENSCCAG00000028463	-	98	79.630	ENSCHIG00000021160	TRUB2	96	81.388	Capra_hircus
ENSCCAG00000028463	-	96	84.810	ENSTSYG00000034163	TRUB2	98	83.077	Carlito_syrichta
ENSCCAG00000028463	-	89	78.322	ENSCAPG00000000223	TRUB2	97	78.819	Cavia_aperea
ENSCCAG00000028463	-	96	77.044	ENSCPOG00000013535	TRUB2	96	77.743	Cavia_porcellus
ENSCCAG00000028463	-	98	86.420	ENSCATG00000038234	TRUB2	98	87.926	Cercocebus_atys
ENSCCAG00000028463	-	97	76.562	ENSCLAG00000001702	TRUB2	98	77.429	Chinchilla_lanigera
ENSCCAG00000028463	-	98	81.846	ENSCSAG00000014117	TRUB2	98	82.716	Chlorocebus_sabaeus
ENSCCAG00000028463	-	98	82.043	ENSCHOG00000001555	TRUB2	96	84.013	Choloepus_hoffmanni
ENSCCAG00000028463	-	89	63.605	ENSCPBG00000025186	TRUB2	86	63.946	Chrysemys_picta_bellii
ENSCCAG00000028463	-	87	33.677	ENSCSAVG00000003930	-	90	33.677	Ciona_savignyi
ENSCCAG00000028463	-	98	77.160	ENSCANG00000016135	TRUB2	97	78.328	Colobus_angolensis_palliatus
ENSCCAG00000028463	-	98	76.852	ENSCGRG00001024441	Trub2	98	76.615	Cricetulus_griseus_chok1gshd
ENSCCAG00000028463	-	98	76.852	ENSCGRG00000005633	Trub2	98	76.615	Cricetulus_griseus_crigri
ENSCCAG00000028463	-	84	52.347	ENSCSEG00000001331	trub2	83	52.347	Cynoglossus_semilaevis
ENSCCAG00000028463	-	85	52.669	ENSCVAG00000009901	trub2	84	52.669	Cyprinodon_variegatus
ENSCCAG00000028463	-	84	54.317	ENSDARG00000028379	trub2	79	54.317	Danio_rerio
ENSCCAG00000028463	-	92	59.596	ENSDNOG00000043967	-	88	59.516	Dasypus_novemcinctus
ENSCCAG00000028463	-	97	80.312	ENSDNOG00000045679	-	96	80.878	Dasypus_novemcinctus
ENSCCAG00000028463	-	98	76.147	ENSDORG00000016222	Trub2	96	79.605	Dipodomys_ordii
ENSCCAG00000028463	-	81	33.088	FBgn0033060	CG7849	85	33.088	Drosophila_melanogaster
ENSCCAG00000028463	-	88	82.192	ENSETEG00000009114	TRUB2	90	82.192	Echinops_telfairi
ENSCCAG00000028463	-	71	42.105	ENSEBUG00000015723	trub2	82	42.105	Eptatretus_burgeri
ENSCCAG00000028463	-	98	83.025	ENSEASG00005016819	TRUB2	97	84.688	Equus_asinus_asinus
ENSCCAG00000028463	-	98	83.333	ENSECAG00000023520	TRUB2	97	85.000	Equus_caballus
ENSCCAG00000028463	-	95	82.222	ENSEEUG00000008908	TRUB2	96	82.222	Erinaceus_europaeus
ENSCCAG00000028463	-	84	54.296	ENSELUG00000002376	trub2	91	54.296	Esox_lucius
ENSCCAG00000028463	-	98	83.025	ENSFCAG00000005839	TRUB2	97	83.901	Felis_catus
ENSCCAG00000028463	-	87	58.537	ENSFALG00000001364	TRUB2	93	58.885	Ficedula_albicollis
ENSCCAG00000028463	-	98	76.161	ENSFDAG00000021374	TRUB2	96	78.056	Fukomys_damarensis
ENSCCAG00000028463	-	85	48.043	ENSFHEG00000014655	trub2	83	48.043	Fundulus_heteroclitus
ENSCCAG00000028463	-	83	46.840	ENSGMOG00000000981	trub2	92	46.840	Gadus_morhua
ENSCCAG00000028463	-	87	59.375	ENSGALG00000004920	TRUB2	71	59.375	Gallus_gallus
ENSCCAG00000028463	-	85	52.669	ENSGAFG00000010107	trub2	88	50.338	Gambusia_affinis
ENSCCAG00000028463	-	85	53.901	ENSGACG00000001476	trub2	85	53.901	Gasterosteus_aculeatus
ENSCCAG00000028463	-	89	64.966	ENSGAGG00000022872	TRUB2	87	64.966	Gopherus_agassizii
ENSCCAG00000028463	-	97	88.923	ENSGGOG00000014780	TRUB2	98	88.923	Gorilla_gorilla
ENSCCAG00000028463	-	85	51.601	ENSHBUG00000022384	trub2	85	51.601	Haplochromis_burtoni
ENSCCAG00000028463	-	98	76.852	ENSHGLG00000016715	TRUB2	97	78.750	Heterocephalus_glaber_female
ENSCCAG00000028463	-	98	76.852	ENSHGLG00100016548	TRUB2	97	78.750	Heterocephalus_glaber_male
ENSCCAG00000028463	-	84	54.676	ENSHCOG00000017748	trub2	85	54.676	Hippocampus_comes
ENSCCAG00000028463	-	98	79.630	ENSSTOG00000022617	-	97	80.503	Ictidomys_tridecemlineatus
ENSCCAG00000028463	-	98	79.012	ENSSTOG00000008024	-	96	79.874	Ictidomys_tridecemlineatus
ENSCCAG00000028463	-	98	70.588	ENSJJAG00000019181	Trub2	95	71.746	Jaculus_jaculus
ENSCCAG00000028463	-	83	52.708	ENSKMAG00000007861	trub2	83	52.708	Kryptolebias_marmoratus
ENSCCAG00000028463	-	85	52.313	ENSLBEG00000000907	trub2	83	52.313	Labrus_bergylta
ENSCCAG00000028463	-	97	56.442	ENSLACG00000001515	TRUB2	85	62.238	Latimeria_chalumnae
ENSCCAG00000028463	-	87	57.388	ENSLOCG00000000885	trub2	95	57.388	Lepisosteus_oculatus
ENSCCAG00000028463	-	89	86.149	ENSLAFG00000002174	TRUB2	98	86.149	Loxodonta_africana
ENSCCAG00000028463	-	98	85.802	ENSMFAG00000000881	TRUB2	98	86.687	Macaca_fascicularis
ENSCCAG00000028463	-	98	85.802	ENSMMUG00000014146	TRUB2	98	86.687	Macaca_mulatta
ENSCCAG00000028463	-	98	85.494	ENSMNEG00000011189	TRUB2	98	86.378	Macaca_nemestrina
ENSCCAG00000028463	-	98	86.420	ENSMLEG00000037270	TRUB2	98	87.616	Mandrillus_leucophaeus
ENSCCAG00000028463	-	85	53.737	ENSMAMG00000023643	trub2	93	53.737	Mastacembelus_armatus
ENSCCAG00000028463	-	84	51.439	ENSMZEG00005016018	trub2	84	51.439	Maylandia_zebra
ENSCCAG00000028463	-	62	67.000	ENSMGAG00000003894	TRUB2	100	67.000	Meleagris_gallopavo
ENSCCAG00000028463	-	98	77.469	ENSMAUG00000010403	Trub2	97	78.125	Mesocricetus_auratus
ENSCCAG00000028463	-	98	83.642	ENSMICG00000047032	TRUB2	97	85.404	Microcebus_murinus
ENSCCAG00000028463	-	89	81.695	ENSMOCG00000014291	Trub2	97	81.695	Microtus_ochrogaster
ENSCCAG00000028463	-	85	54.610	ENSMMOG00000021674	trub2	86	54.610	Mola_mola
ENSCCAG00000028463	-	88	73.793	ENSMODG00000005940	TRUB2	98	73.793	Monodelphis_domestica
ENSCCAG00000028463	-	91	54.194	ENSMALG00000021231	trub2	92	54.194	Monopterus_albus
ENSCCAG00000028463	-	98	78.086	MGP_CAROLIEiJ_G0023368	Trub2	97	79.688	Mus_caroli
ENSCCAG00000028463	-	98	77.160	ENSMUSG00000039826	Trub2	97	78.750	Mus_musculus
ENSCCAG00000028463	-	98	77.778	MGP_PahariEiJ_G0024826	Trub2	98	78.462	Mus_pahari
ENSCCAG00000028463	-	98	77.469	MGP_SPRETEiJ_G0024286	Trub2	97	79.062	Mus_spretus
ENSCCAG00000028463	-	98	79.630	ENSMPUG00000013206	TRUB2	88	80.805	Mustela_putorius_furo
ENSCCAG00000028463	-	98	81.538	ENSMLUG00000005256	TRUB2	95	83.121	Myotis_lucifugus
ENSCCAG00000028463	-	98	78.395	ENSNGAG00000018679	Trub2	97	79.688	Nannospalax_galili
ENSCCAG00000028463	-	85	50.890	ENSNBRG00000016294	trub2	85	50.890	Neolamprologus_brichardi
ENSCCAG00000028463	-	97	87.385	ENSNLEG00000017556	TRUB2	98	87.385	Nomascus_leucogenys
ENSCCAG00000028463	-	91	72.039	ENSMEUG00000000484	TRUB2	98	72.039	Notamacropus_eugenii
ENSCCAG00000028463	-	98	74.383	ENSOPRG00000001981	TRUB2	96	75.949	Ochotona_princeps
ENSCCAG00000028463	-	96	78.165	ENSODEG00000017292	TRUB2	98	78.125	Octodon_degus
ENSCCAG00000028463	-	85	51.246	ENSONIG00000004230	trub2	85	51.246	Oreochromis_niloticus
ENSCCAG00000028463	-	59	76.963	ENSOANG00000029023	-	85	76.963	Ornithorhynchus_anatinus
ENSCCAG00000028463	-	98	78.704	ENSOCUG00000026296	TRUB2	88	79.688	Oryctolagus_cuniculus
ENSCCAG00000028463	-	84	51.986	ENSORLG00000020011	trub2	84	51.986	Oryzias_latipes
ENSCCAG00000028463	-	84	52.347	ENSORLG00020011028	trub2	81	52.347	Oryzias_latipes_hni
ENSCCAG00000028463	-	84	52.347	ENSORLG00015007494	trub2	85	52.347	Oryzias_latipes_hsok
ENSCCAG00000028463	-	84	54.676	ENSOMEG00000006702	trub2	84	54.676	Oryzias_melastigma
ENSCCAG00000028463	-	78	78.884	ENSOARG00000003785	-	97	81.148	Ovis_aries
ENSCCAG00000028463	-	98	79.938	ENSOARG00000010579	-	96	81.703	Ovis_aries
ENSCCAG00000028463	-	97	88.923	ENSPPAG00000043146	TRUB2	98	88.923	Pan_paniscus
ENSCCAG00000028463	-	98	83.025	ENSPPRG00000006307	TRUB2	97	83.901	Panthera_pardus
ENSCCAG00000028463	-	98	82.716	ENSPTIG00000012366	TRUB2	97	83.591	Panthera_tigris_altaica
ENSCCAG00000028463	-	98	87.963	ENSPTRG00000021423	TRUB2	98	88.615	Pan_troglodytes
ENSCCAG00000028463	-	98	87.963	ENSPTRG00000052151	-	98	88.615	Pan_troglodytes
ENSCCAG00000028463	-	98	86.420	ENSPANG00000025856	TRUB2	98	87.616	Papio_anubis
ENSCCAG00000028463	-	83	52.536	ENSPKIG00000019769	trub2	90	52.536	Paramormyrops_kingsleyae
ENSCCAG00000028463	-	88	59.932	ENSPSIG00000015701	TRUB2	98	59.932	Pelodiscus_sinensis
ENSCCAG00000028463	-	89	50.000	ENSPMGG00000010206	trub2	97	50.000	Periophthalmus_magnuspinnatus
ENSCCAG00000028463	-	98	76.615	ENSPEMG00000017893	Trub2	98	77.301	Peromyscus_maniculatus_bairdii
ENSCCAG00000028463	-	87	75.000	ENSPCIG00000026731	TRUB2	93	75.000	Phascolarctos_cinereus
ENSCCAG00000028463	-	84	51.971	ENSPFOG00000018018	trub2	74	51.971	Poecilia_formosa
ENSCCAG00000028463	-	84	51.613	ENSPLAG00000010484	trub2	80	51.613	Poecilia_latipinna
ENSCCAG00000028463	-	92	49.671	ENSPMEG00000012913	trub2	90	49.671	Poecilia_mexicana
ENSCCAG00000028463	-	85	50.890	ENSPREG00000002549	trub2	83	50.890	Poecilia_reticulata
ENSCCAG00000028463	-	97	85.938	ENSPPYG00000019650	TRUB2	98	87.188	Pongo_abelii
ENSCCAG00000028463	-	94	85.484	ENSPCAG00000015068	TRUB2	97	84.277	Procavia_capensis
ENSCCAG00000028463	-	98	83.951	ENSPCOG00000017100	TRUB2	97	85.714	Propithecus_coquereli
ENSCCAG00000028463	-	90	84.564	ENSPVAG00000001224	TRUB2	100	84.564	Pteropus_vampyrus
ENSCCAG00000028463	-	85	51.246	ENSPNYG00000013666	trub2	85	51.246	Pundamilia_nyererei
ENSCCAG00000028463	-	83	53.791	ENSPNAG00000017292	trub2	79	53.791	Pygocentrus_nattereri
ENSCCAG00000028463	-	94	77.955	ENSRNOG00000043189	Trub2	97	77.955	Rattus_norvegicus
ENSCCAG00000028463	-	98	78.395	ENSRBIG00000006965	TRUB2	97	79.876	Rhinopithecus_bieti
ENSCCAG00000028463	-	98	87.037	ENSRROG00000042928	TRUB2	98	88.545	Rhinopithecus_roxellana
ENSCCAG00000028463	-	98	91.615	ENSSBOG00000022439	TRUB2	98	93.519	Saimiri_boliviensis_boliviensis
ENSCCAG00000028463	-	84	54.317	ENSSFOG00015013391	trub2	89	54.317	Scleropages_formosus
ENSCCAG00000028463	-	96	49.691	ENSSMAG00000020820	trub2	98	49.691	Scophthalmus_maximus
ENSCCAG00000028463	-	85	52.313	ENSSDUG00000016928	trub2	84	52.313	Seriola_dumerili
ENSCCAG00000028463	-	85	52.313	ENSSLDG00000024701	trub2	84	52.313	Seriola_lalandi_dorsalis
ENSCCAG00000028463	-	89	59.386	ENSSPUG00000015515	TRUB2	87	59.386	Sphenodon_punctatus
ENSCCAG00000028463	-	99	51.064	ENSSPAG00000017865	trub2	85	55.872	Stegastes_partitus
ENSCCAG00000028463	-	98	82.716	ENSSSCG00000005645	TRUB2	97	86.806	Sus_scrofa
ENSCCAG00000028463	-	81	63.359	ENSTGUG00000003704	TRUB2	100	63.359	Taeniopygia_guttata
ENSCCAG00000028463	-	85	50.178	ENSTRUG00000015499	trub2	86	50.178	Takifugu_rubripes
ENSCCAG00000028463	-	83	53.237	ENSTNIG00000014721	trub2	95	53.237	Tetraodon_nigroviridis
ENSCCAG00000028463	-	68	81.166	ENSTBEG00000000586	TRUB2	99	81.166	Tupaia_belangeri
ENSCCAG00000028463	-	98	76.852	ENSTTRG00000016486	TRUB2	98	78.019	Tursiops_truncatus
ENSCCAG00000028463	-	99	79.341	ENSUAMG00000020276	TRUB2	93	82.812	Ursus_americanus
ENSCCAG00000028463	-	99	79.341	ENSUMAG00000022051	TRUB2	93	82.812	Ursus_maritimus
ENSCCAG00000028463	-	94	62.701	ENSVPAG00000005793	TRUB2	98	62.701	Vicugna_pacos
ENSCCAG00000028463	-	94	82.258	ENSVVUG00000013451	TRUB2	89	82.258	Vulpes_vulpes
ENSCCAG00000028463	-	92	59.016	ENSXETG00000003973	trub2	93	59.016	Xenopus_tropicalis
ENSCCAG00000028463	-	85	52.313	ENSXCOG00000008759	trub2	84	52.313	Xiphophorus_couchianus
ENSCCAG00000028463	-	85	51.957	ENSXMAG00000015478	trub2	84	51.957	Xiphophorus_maculatus