EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000028502 (Gene tree)
Gene ID: 108292438
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 5256 bases
Position: chrKV389917.1:1108669-1113924
Accession: 108292438
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000021340	MMR_HSR1	PF01926.23	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000038838	-	366	-	ENSCCAP00000021344	121 (aa)	-	A0A2K5QZM7
ENSCCAT00000038834	-	1182	XM_017513343	ENSCCAP00000021340	203 (aa)	XP_017368832	A0A2K5QZQ2

Gene Model

Click here to download ENSCCAG00000028502's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000028502's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000028502	-	84	40.230	ENSCCAG00000028745	RAB2B	98	40.230
ENSCCAG00000028502	-	95	37.500	ENSCCAG00000025940	RAB5C	89	37.500
ENSCCAG00000028502	-	83	47.929	ENSCCAG00000025945	RAB2A	80	47.929
ENSCCAG00000028502	-	78	31.013	ENSCCAG00000025944	-	67	31.013
ENSCCAG00000028502	-	95	37.500	ENSCCAG00000019480	RAB5B	89	37.500
ENSCCAG00000028502	-	79	37.423	ENSCCAG00000035799	-	78	37.423
ENSCCAG00000028502	-	80	39.881	ENSCCAG00000017812	RAB9B	83	39.881
ENSCCAG00000028502	-	83	41.379	ENSCCAG00000019859	RAB33B	76	41.379
ENSCCAG00000028502	-	86	46.629	ENSCCAG00000030469	RAB39B	84	46.629
ENSCCAG00000028502	-	80	49.383	ENSCCAG00000026824	RAB30	80	49.383
ENSCCAG00000028502	-	78	42.405	ENSCCAG00000035269	RAB6B	76	42.405
ENSCCAG00000028502	-	80	38.824	ENSCCAG00000017991	RAB9A	83	38.824
ENSCCAG00000028502	-	81	32.121	ENSCCAG00000030751	RHEB	87	32.121
ENSCCAG00000028502	-	91	54.348	ENSCCAG00000021540	RAB1B	92	54.348
ENSCCAG00000028502	-	84	53.529	ENSCCAG00000033681	RAB15	94	57.143
ENSCCAG00000028502	-	91	36.702	ENSCCAG00000030930	RAB22A	97	36.702
ENSCCAG00000028502	-	95	37.864	ENSCCAG00000034632	RAB34	80	37.864
ENSCCAG00000028502	-	95	39.062	ENSCCAG00000022405	RAB5A	89	39.062
ENSCCAG00000028502	-	83	34.682	ENSCCAG00000026139	RERG	84	34.682
ENSCCAG00000028502	-	81	47.273	ENSCCAG00000021286	RAB11A	76	47.273
ENSCCAG00000028502	-	91	42.424	ENSCCAG00000031042	RAB11B	89	47.826
ENSCCAG00000028502	-	84	51.744	ENSCCAG00000022862	RAB12	70	51.744
ENSCCAG00000028502	-	91	36.757	ENSCCAG00000031963	KRAS	98	37.436
ENSCCAG00000028502	-	81	37.576	ENSCCAG00000020364	RAB23	69	37.576
ENSCCAG00000028502	-	79	39.506	ENSCCAG00000031453	HRAS	85	39.506
ENSCCAG00000028502	-	81	44.242	ENSCCAG00000020267	RAB14	77	44.242
ENSCCAG00000028502	-	87	42.781	ENSCCAG00000035680	RAB33A	79	42.781
ENSCCAG00000028502	-	67	30.147	ENSCCAG00000027943	-	72	30.147
ENSCCAG00000028502	-	79	38.272	ENSCCAG00000030765	-	85	38.272
ENSCCAG00000028502	-	84	55.294	ENSCCAG00000031720	RAB35	84	55.294
ENSCCAG00000028502	-	83	30.114	ENSCCAG00000021410	DNAJC27	89	30.380
ENSCCAG00000028502	-	86	44.318	ENSCCAG00000006762	RAB18	85	44.318
ENSCCAG00000028502	-	62	31.429	ENSCCAG00000022484	ARFRP1	67	31.429
ENSCCAG00000028502	-	80	38.323	ENSCCAG00000036322	RAB7A	88	38.323
ENSCCAG00000028502	-	97	51.269	ENSCCAG00000021869	RAB1A	96	51.269

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000028502	-	100	99.507	ENSG00000143545	RAB13	100	99.507	Homo_sapiens
ENSCCAG00000028502	-	99	75.124	ENSACIG00000008584	rab13	97	75.124	Amphilophus_citrinellus
ENSCCAG00000028502	-	100	98.522	ENSANAG00000030247	-	100	98.522	Aotus_nancymaae
ENSCCAG00000028502	-	99	78.713	ENSAMXG00000030712	rab13	99	78.713	Astyanax_mexicanus
ENSCCAG00000028502	-	100	97.537	ENSBTAG00000017604	RAB13	100	97.537	Bos_taurus
ENSCCAG00000028502	-	80	47.239	WBGene00019317	K02E10.1	75	47.239	Caenorhabditis_elegans
ENSCCAG00000028502	-	100	98.522	ENSCJAG00000009933	-	100	98.522	Callithrix_jacchus
ENSCCAG00000028502	-	100	97.044	ENSCHIG00000022271	-	100	97.044	Capra_hircus
ENSCCAG00000028502	-	99	90.594	ENSCPOG00000011491	-	99	90.594	Cavia_porcellus
ENSCCAG00000028502	-	100	99.507	ENSCATG00000041779	-	100	99.507	Cercocebus_atys
ENSCCAG00000028502	-	100	90.640	ENSCLAG00000006603	-	100	90.640	Chinchilla_lanigera
ENSCCAG00000028502	-	100	99.507	ENSCANG00000036573	-	100	99.507	Colobus_angolensis_palliatus
ENSCCAG00000028502	-	100	95.074	ENSCGRG00001021505	Rab13	100	95.074	Cricetulus_griseus_chok1gshd
ENSCCAG00000028502	-	100	95.074	ENSCGRG00000012126	Rab13	100	95.074	Cricetulus_griseus_crigri
ENSCCAG00000028502	-	99	75.980	ENSCSEG00000002358	rab13	99	75.980	Cynoglossus_semilaevis
ENSCCAG00000028502	-	99	78.218	ENSDARG00000034771	rab13	99	78.218	Danio_rerio
ENSCCAG00000028502	-	100	95.074	ENSDORG00000001591	Rab13	100	95.074	Dipodomys_ordii
ENSCCAG00000028502	-	100	98.030	ENSEASG00005000683	-	100	98.030	Equus_asinus_asinus
ENSCCAG00000028502	-	100	98.030	ENSECAG00000016551	RAB13	100	98.030	Equus_caballus
ENSCCAG00000028502	-	99	89.604	ENSEEUG00000001233	-	99	89.604	Erinaceus_europaeus
ENSCCAG00000028502	-	99	76.733	ENSELUG00000012801	rab13	99	76.733	Esox_lucius
ENSCCAG00000028502	-	100	91.626	ENSFCAG00000045269	-	100	91.626	Felis_catus
ENSCCAG00000028502	-	65	96.970	ENSFDAG00000014469	-	100	96.970	Fukomys_damarensis
ENSCCAG00000028502	-	99	75.743	ENSFHEG00000021221	rab13	95	85.549	Fundulus_heteroclitus
ENSCCAG00000028502	-	99	75.248	ENSGACG00000011925	rab13	99	75.248	Gasterosteus_aculeatus
ENSCCAG00000028502	-	85	90.751	ENSGAGG00000000742	-	99	81.281	Gopherus_agassizii
ENSCCAG00000028502	-	100	99.507	ENSGGOG00000023693	RAB13	100	99.507	Gorilla_gorilla
ENSCCAG00000028502	-	100	89.655	ENSHGLG00000008749	RAB13	100	89.655	Heterocephalus_glaber_female
ENSCCAG00000028502	-	100	89.655	ENSHGLG00100013608	RAB13	100	89.655	Heterocephalus_glaber_male
ENSCCAG00000028502	-	99	73.762	ENSHCOG00000007440	rab13	95	86.127	Hippocampus_comes
ENSCCAG00000028502	-	99	77.000	ENSIPUG00000003199	rab13	99	77.000	Ictalurus_punctatus
ENSCCAG00000028502	-	100	96.552	ENSSTOG00000011222	-	100	96.552	Ictidomys_tridecemlineatus
ENSCCAG00000028502	-	100	91.626	ENSJJAG00000010575	Rab13	100	91.626	Jaculus_jaculus
ENSCCAG00000028502	-	99	75.500	ENSKMAG00000001908	rab13	99	75.500	Kryptolebias_marmoratus
ENSCCAG00000028502	-	99	77.000	ENSLBEG00000026779	rab13	99	77.000	Labrus_bergylta
ENSCCAG00000028502	-	85	77.907	ENSLACG00000008103	-	97	77.907	Latimeria_chalumnae
ENSCCAG00000028502	-	100	99.507	ENSMFAG00000041018	RAB13	100	99.507	Macaca_fascicularis
ENSCCAG00000028502	-	100	99.507	ENSMNEG00000028951	-	100	99.507	Macaca_nemestrina
ENSCCAG00000028502	-	100	99.507	ENSMLEG00000042247	-	100	99.507	Mandrillus_leucophaeus
ENSCCAG00000028502	-	99	75.248	ENSMAMG00000014602	rab13	99	75.248	Mastacembelus_armatus
ENSCCAG00000028502	-	100	95.074	ENSMAUG00000015713	Rab13	100	95.074	Mesocricetus_auratus
ENSCCAG00000028502	-	100	96.552	ENSMICG00000010340	-	100	96.552	Microcebus_murinus
ENSCCAG00000028502	-	100	95.074	ENSMOCG00000021448	Rab13	100	95.074	Microtus_ochrogaster
ENSCCAG00000028502	-	99	92.574	ENSMODG00000017295	-	84	92.574	Monodelphis_domestica
ENSCCAG00000028502	-	100	92.611	MGP_CAROLIEiJ_G0025227	Rab13	100	92.611	Mus_caroli
ENSCCAG00000028502	-	100	91.626	ENSMUSG00000027935	Rab13	100	91.626	Mus_musculus
ENSCCAG00000028502	-	99	92.079	MGP_PahariEiJ_G0026671	Rab13	99	92.079	Mus_pahari
ENSCCAG00000028502	-	100	95.074	ENSNGAG00000010309	Rab13	100	95.074	Nannospalax_galili
ENSCCAG00000028502	-	99	75.248	ENSNBRG00000004124	rab13	99	75.248	Neolamprologus_brichardi
ENSCCAG00000028502	-	100	99.507	ENSNLEG00000028944	-	100	99.507	Nomascus_leucogenys
ENSCCAG00000028502	-	100	92.157	ENSMEUG00000009667	-	100	92.157	Notamacropus_eugenii
ENSCCAG00000028502	-	63	97.638	ENSODEG00000012634	-	100	97.638	Octodon_degus
ENSCCAG00000028502	-	100	89.163	ENSODEG00000010443	-	100	89.163	Octodon_degus
ENSCCAG00000028502	-	99	75.743	ENSONIG00000006340	rab13	99	75.743	Oreochromis_niloticus
ENSCCAG00000028502	-	88	96.067	ENSOCUG00000006286	-	100	96.067	Oryctolagus_cuniculus
ENSCCAG00000028502	-	99	76.238	ENSOMEG00000008210	rab13	99	76.238	Oryzias_melastigma
ENSCCAG00000028502	-	99	93.564	ENSOGAG00000016969	-	99	93.564	Otolemur_garnettii
ENSCCAG00000028502	-	100	99.507	ENSPPAG00000028435	-	100	99.507	Pan_paniscus
ENSCCAG00000028502	-	100	91.626	ENSPPRG00000008865	-	100	91.626	Panthera_pardus
ENSCCAG00000028502	-	100	99.507	ENSPTRG00000001370	RAB13	100	99.507	Pan_troglodytes
ENSCCAG00000028502	-	100	99.507	ENSPANG00000004479	-	100	99.507	Papio_anubis
ENSCCAG00000028502	-	99	75.743	ENSPMGG00000007680	rab13	99	75.743	Periophthalmus_magnuspinnatus
ENSCCAG00000028502	-	53	97.222	ENSPEMG00000017353	-	81	97.222	Peromyscus_maniculatus_bairdii
ENSCCAG00000028502	-	100	92.647	ENSPCIG00000029350	-	100	92.647	Phascolarctos_cinereus
ENSCCAG00000028502	-	95	74.112	ENSPLAG00000005832	RAB13	93	83.815	Poecilia_latipinna
ENSCCAG00000028502	-	90	80.328	ENSPREG00000017567	rab13	99	74.257	Poecilia_reticulata
ENSCCAG00000028502	-	100	99.507	ENSPPYG00000000790	-	100	99.507	Pongo_abelii
ENSCCAG00000028502	-	100	97.537	ENSPCOG00000012189	-	100	97.537	Propithecus_coquereli
ENSCCAG00000028502	-	100	94.581	ENSPVAG00000011095	-	100	94.581	Pteropus_vampyrus
ENSCCAG00000028502	-	85	86.127	ENSPNAG00000004189	rab13	92	86.127	Pygocentrus_nattereri
ENSCCAG00000028502	-	100	92.611	ENSRNOG00000016733	Rab13	100	92.611	Rattus_norvegicus
ENSCCAG00000028502	-	100	99.015	ENSRBIG00000008552	-	100	99.015	Rhinopithecus_bieti
ENSCCAG00000028502	-	100	99.015	ENSRROG00000036885	-	100	99.015	Rhinopithecus_roxellana
ENSCCAG00000028502	-	100	99.507	ENSSBOG00000020342	-	100	99.507	Saimiri_boliviensis_boliviensis
ENSCCAG00000028502	-	100	91.667	ENSSHAG00000011866	-	100	91.667	Sarcophilus_harrisii
ENSCCAG00000028502	-	100	98.030	ENSSSCG00000006564	-	100	98.030	Sus_scrofa
ENSCCAG00000028502	-	99	76.733	ENSTRUG00000024177	rab13	99	76.733	Takifugu_rubripes
ENSCCAG00000028502	-	100	96.552	ENSTBEG00000012734	-	100	96.552	Tupaia_belangeri
ENSCCAG00000028502	-	100	99.015	ENSTTRG00000011183	-	100	99.015	Tursiops_truncatus
ENSCCAG00000028502	-	71	81.944	ENSXETG00000020729	rab13	99	78.882	Xenopus_tropicalis
ENSCCAG00000028502	-	85	82.659	ENSXCOG00000019533	rab13	93	82.659	Xiphophorus_couchianus