EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000028553 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 1018 bases
Position: chrKV389459.1:5585461-5586478
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000021437	Brix	PF04427.18	3e-29	1	1
ENSCCAP00000021433	Brix	PF04427.18	3.1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000038931	-	780	-	ENSCCAP00000021437	259 (aa)	-	A0A2K5QZX2
ENSCCAT00000038927	-	798	-	ENSCCAP00000021433	265 (aa)	-	A0A2K5QZX1

Gene Model

Click here to download ENSCCAG00000028553's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000028553's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000028553	-	97	61.356	ENSCCAG00000028906	-	96	65.789
ENSCCAG00000028553	-	98	74.917	ENSCCAG00000030365	-	99	75.908
ENSCCAG00000028553	-	98	75.248	ENSCCAG00000030864	-	99	68.317

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000028553	-	97	74.419	ENSG00000197498	RPF2	100	74.299	Homo_sapiens
ENSCCAG00000028553	-	99	55.016	ENSAPOG00000005714	rpf2	100	49.838	Acanthochromis_polyacanthus
ENSCCAG00000028553	-	98	71.617	ENSAMEG00000015753	RPF2	99	67.000	Ailuropoda_melanoleuca
ENSCCAG00000028553	-	99	54.221	ENSAOCG00000005173	rpf2	99	49.026	Amphiprion_ocellaris
ENSCCAG00000028553	-	99	54.221	ENSAPEG00000004003	rpf2	99	49.026	Amphiprion_percula
ENSCCAG00000028553	-	99	53.074	ENSATEG00000012818	rpf2	100	48.220	Anabas_testudineus
ENSCCAG00000028553	-	85	65.683	ENSAPLG00000008812	RPF2	99	65.683	Anas_platyrhynchos
ENSCCAG00000028553	-	96	62.542	ENSACAG00000011270	RPF2	97	63.211	Anolis_carolinensis
ENSCCAG00000028553	-	98	58.278	ENSANAG00000025459	-	96	58.278	Aotus_nancymaae
ENSCCAG00000028553	-	98	67.987	ENSANAG00000034834	-	99	66.337	Aotus_nancymaae
ENSCCAG00000028553	-	99	79.478	ENSANAG00000021067	-	100	79.478	Aotus_nancymaae
ENSCCAG00000028553	-	98	71.617	ENSANAG00000026549	-	99	64.686	Aotus_nancymaae
ENSCCAG00000028553	-	97	67.368	ENSANAG00000033736	-	99	67.719	Aotus_nancymaae
ENSCCAG00000028553	-	95	53.716	ENSAMXG00000035201	rpf2	96	54.730	Astyanax_mexicanus
ENSCCAG00000028553	-	98	72.607	ENSBTAG00000016584	RPF2	99	65.677	Bos_taurus
ENSCCAG00000028553	-	89	32.971	WBGene00021830	Y54E10A.10	93	32.971	Caenorhabditis_elegans
ENSCCAG00000028553	-	98	74.917	ENSCJAG00000038330	RPF2	99	67.987	Callithrix_jacchus
ENSCCAG00000028553	-	98	72.607	ENSCAFG00000003918	RPF2	99	73.597	Canis_familiaris
ENSCCAG00000028553	-	98	68.647	ENSCHIG00000022499	RPF2	99	61.716	Capra_hircus
ENSCCAG00000028553	-	98	70.627	ENSTSYG00000013924	RPF2	99	71.287	Carlito_syrichta
ENSCCAG00000028553	-	95	67.910	ENSCAPG00000014257	RPF2	94	68.165	Cavia_aperea
ENSCCAG00000028553	-	98	71.053	ENSCPOG00000006797	RPF2	100	64.437	Cavia_porcellus
ENSCCAG00000028553	-	97	76.806	ENSCATG00000034352	-	98	76.806	Cercocebus_atys
ENSCCAG00000028553	-	83	59.480	ENSCATG00000029725	-	99	59.707	Cercocebus_atys
ENSCCAG00000028553	-	86	50.958	ENSCLAG00000013252	-	98	43.678	Chinchilla_lanigera
ENSCCAG00000028553	-	97	72.093	ENSCLAG00000010393	-	99	65.836	Chinchilla_lanigera
ENSCCAG00000028553	-	95	60.204	ENSCLAG00000010874	-	97	61.224	Chinchilla_lanigera
ENSCCAG00000028553	-	98	68.197	ENSCHOG00000005865	RPF2	99	60.984	Choloepus_hoffmanni
ENSCCAG00000028553	-	95	65.424	ENSCPBG00000006504	RPF2	96	65.424	Chrysemys_picta_bellii
ENSCCAG00000028553	-	92	45.035	ENSCING00000008090	-	97	44.518	Ciona_intestinalis
ENSCCAG00000028553	-	92	44.483	ENSCSAVG00000010672	-	97	45.172	Ciona_savignyi
ENSCCAG00000028553	-	98	73.597	ENSCANG00000030665	RPF2	99	70.297	Colobus_angolensis_palliatus
ENSCCAG00000028553	-	98	60.751	ENSCGRG00001005262	-	98	60.473	Cricetulus_griseus_chok1gshd
ENSCCAG00000028553	-	98	69.967	ENSCGRG00001007331	-	99	68.977	Cricetulus_griseus_chok1gshd
ENSCCAG00000028553	-	95	71.233	ENSCGRG00000006083	Rpf2	95	70.447	Cricetulus_griseus_crigri
ENSCCAG00000028553	-	95	54.296	ENSCSEG00000015725	rpf2	98	54.362	Cynoglossus_semilaevis
ENSCCAG00000028553	-	98	54.276	ENSCVAG00000001072	rpf2	99	54.276	Cyprinodon_variegatus
ENSCCAG00000028553	-	98	55.921	ENSDARG00000043960	rpf2	99	56.579	Danio_rerio
ENSCCAG00000028553	-	60	64.677	ENSDNOG00000039270	RPF2	98	66.169	Dasypus_novemcinctus
ENSCCAG00000028553	-	68	68.539	ENSDORG00000026915	Rpf2	97	68.539	Dipodomys_ordii
ENSCCAG00000028553	-	93	35.664	FBgn0038585	Non3	90	36.111	Drosophila_melanogaster
ENSCCAG00000028553	-	92	43.310	ENSEBUG00000003640	rpf2	86	43.310	Eptatretus_burgeri
ENSCCAG00000028553	-	95	70.169	ENSEASG00005006927	-	99	62.706	Equus_asinus_asinus
ENSCCAG00000028553	-	95	73.559	ENSECAG00000017121	RPF2	99	66.007	Equus_caballus
ENSCCAG00000028553	-	77	81.538	ENSEEUG00000006169	RPF2	79	82.812	Erinaceus_europaeus
ENSCCAG00000028553	-	91	55.401	ENSELUG00000018518	rpf2	94	55.749	Esox_lucius
ENSCCAG00000028553	-	98	72.277	ENSFCAG00000001527	RPF2	99	73.267	Felis_catus
ENSCCAG00000028553	-	94	67.235	ENSFALG00000010816	RPF2	96	67.235	Ficedula_albicollis
ENSCCAG00000028553	-	85	56.089	ENSFDAG00000016721	-	100	56.827	Fukomys_damarensis
ENSCCAG00000028553	-	98	72.277	ENSFDAG00000005811	-	99	66.007	Fukomys_damarensis
ENSCCAG00000028553	-	99	54.221	ENSFHEG00000011243	rpf2	99	55.195	Fundulus_heteroclitus
ENSCCAG00000028553	-	90	49.466	ENSGMOG00000002521	rpf2	94	49.643	Gadus_morhua
ENSCCAG00000028553	-	94	67.235	ENSGALG00000037087	RPF2	96	68.259	Gallus_gallus
ENSCCAG00000028553	-	98	54.276	ENSGAFG00000009537	rpf2	99	55.263	Gambusia_affinis
ENSCCAG00000028553	-	99	55.016	ENSGACG00000006507	rpf2	100	55.016	Gasterosteus_aculeatus
ENSCCAG00000028553	-	95	63.390	ENSGAGG00000016221	RPF2	96	63.729	Gopherus_agassizii
ENSCCAG00000028553	-	97	82.129	ENSGGOG00000001469	RPF2	98	82.129	Gorilla_gorilla
ENSCCAG00000028553	-	91	69.231	ENSGGOG00000024187	-	100	69.930	Gorilla_gorilla
ENSCCAG00000028553	-	99	53.398	ENSHBUG00000021805	rpf2	100	48.220	Haplochromis_burtoni
ENSCCAG00000028553	-	97	71.096	ENSHGLG00000001322	RPF2	100	63.380	Heterocephalus_glaber_female
ENSCCAG00000028553	-	99	63.000	ENSHGLG00000012500	-	80	64.407	Heterocephalus_glaber_female
ENSCCAG00000028553	-	93	66.084	ENSHGLG00000012697	-	99	67.596	Heterocephalus_glaber_female
ENSCCAG00000028553	-	93	66.084	ENSHGLG00100000462	-	99	67.596	Heterocephalus_glaber_male
ENSCCAG00000028553	-	87	64.143	ENSHGLG00100009310	-	99	64.542	Heterocephalus_glaber_male
ENSCCAG00000028553	-	97	71.096	ENSHGLG00100012131	RPF2	100	63.380	Heterocephalus_glaber_male
ENSCCAG00000028553	-	99	63.000	ENSHGLG00100012473	-	99	63.000	Heterocephalus_glaber_male
ENSCCAG00000028553	-	90	57.651	ENSHGLG00100002981	-	100	57.343	Heterocephalus_glaber_male
ENSCCAG00000028553	-	99	53.571	ENSHCOG00000000225	rpf2	99	54.545	Hippocampus_comes
ENSCCAG00000028553	-	91	60.853	ENSIPUG00000016288	rpf2	90	60.853	Ictalurus_punctatus
ENSCCAG00000028553	-	98	55.405	ENSSTOG00000013114	RPF2	99	55.405	Ictidomys_tridecemlineatus
ENSCCAG00000028553	-	94	64.931	ENSJJAG00000009092	Rpf2	99	64.769	Jaculus_jaculus
ENSCCAG00000028553	-	97	54.305	ENSKMAG00000014609	rpf2	98	55.298	Kryptolebias_marmoratus
ENSCCAG00000028553	-	99	53.247	ENSLBEG00000011907	rpf2	99	41.883	Labrus_bergylta
ENSCCAG00000028553	-	95	56.376	ENSLACG00000003942	RPF2	96	57.383	Latimeria_chalumnae
ENSCCAG00000028553	-	91	56.552	ENSLOCG00000016992	rpf2	93	58.596	Lepisosteus_oculatus
ENSCCAG00000028553	-	98	72.697	ENSLAFG00000018219	RPF2	99	65.789	Loxodonta_africana
ENSCCAG00000028553	-	97	74.419	ENSMFAG00000000417	RPF2	99	68.902	Macaca_fascicularis
ENSCCAG00000028553	-	83	58.955	ENSMFAG00000036119	-	99	59.328	Macaca_fascicularis
ENSCCAG00000028553	-	98	73.579	ENSMMUG00000021532	RPF2	100	74.299	Macaca_mulatta
ENSCCAG00000028553	-	97	60.526	ENSMMUG00000042376	-	99	61.765	Macaca_mulatta
ENSCCAG00000028553	-	97	82.510	ENSMNEG00000031683	RPF2	98	82.510	Macaca_nemestrina
ENSCCAG00000028553	-	97	60.328	ENSMLEG00000042472	-	99	61.311	Mandrillus_leucophaeus
ENSCCAG00000028553	-	99	51.948	ENSMAMG00000004267	rpf2	99	52.922	Mastacembelus_armatus
ENSCCAG00000028553	-	99	53.398	ENSMZEG00005015632	rpf2	100	48.220	Maylandia_zebra
ENSCCAG00000028553	-	95	65.203	ENSMGAG00000013429	RPF2	95	68.041	Meleagris_gallopavo
ENSCCAG00000028553	-	92	60.305	ENSMAUG00000005049	Rpf2	97	60.305	Mesocricetus_auratus
ENSCCAG00000028553	-	98	72.607	ENSMICG00000032086	-	99	67.683	Microcebus_murinus
ENSCCAG00000028553	-	95	63.051	ENSMICG00000038169	-	99	60.544	Microcebus_murinus
ENSCCAG00000028553	-	97	61.279	ENSMICG00000028979	-	99	54.545	Microcebus_murinus
ENSCCAG00000028553	-	96	72.109	ENSMOCG00000005634	Rpf2	100	64.437	Microtus_ochrogaster
ENSCCAG00000028553	-	97	48.475	ENSMMOG00000014844	rpf2	97	43.197	Mola_mola
ENSCCAG00000028553	-	95	68.621	ENSMODG00000017919	RPF2	95	69.896	Monodelphis_domestica
ENSCCAG00000028553	-	99	54.045	ENSMALG00000019046	rpf2	100	48.220	Monopterus_albus
ENSCCAG00000028553	-	98	70.957	MGP_CAROLIEiJ_G0015254	Rpf2	99	69.967	Mus_caroli
ENSCCAG00000028553	-	98	69.967	ENSMUSG00000038510	Rpf2	99	69.118	Mus_musculus
ENSCCAG00000028553	-	98	70.297	MGP_PahariEiJ_G0030671	Rpf2	99	69.485	Mus_pahari
ENSCCAG00000028553	-	98	69.967	MGP_SPRETEiJ_G0016063	Rpf2	86	80.952	Mus_spretus
ENSCCAG00000028553	-	98	72.607	ENSMPUG00000010183	RPF2	86	66.337	Mustela_putorius_furo
ENSCCAG00000028553	-	80	71.825	ENSMLUG00000005676	RPF2	99	63.492	Myotis_lucifugus
ENSCCAG00000028553	-	97	71.761	ENSNGAG00000009701	Rpf2	99	64.769	Nannospalax_galili
ENSCCAG00000028553	-	99	53.398	ENSNBRG00000011087	rpf2	100	48.220	Neolamprologus_brichardi
ENSCCAG00000028553	-	97	74.751	ENSNLEG00000027819	RPF2	98	68.106	Nomascus_leucogenys
ENSCCAG00000028553	-	88	74.786	ENSNLEG00000011848	-	97	74.786	Nomascus_leucogenys
ENSCCAG00000028553	-	95	64.286	ENSNLEG00000033597	-	93	65.306	Nomascus_leucogenys
ENSCCAG00000028553	-	95	48.973	ENSMEUG00000006421	RPF2	98	50.172	Notamacropus_eugenii
ENSCCAG00000028553	-	88	61.654	ENSODEG00000003531	-	99	63.774	Octodon_degus
ENSCCAG00000028553	-	97	60.465	ENSODEG00000006584	-	98	61.462	Octodon_degus
ENSCCAG00000028553	-	97	62.718	ENSODEG00000002442	-	99	62.245	Octodon_degus
ENSCCAG00000028553	-	87	57.565	ENSODEG00000006939	-	88	58.197	Octodon_degus
ENSCCAG00000028553	-	95	72.759	ENSODEG00000013529	-	99	66.192	Octodon_degus
ENSCCAG00000028553	-	97	68.439	ENSODEG00000019144	-	98	62.458	Octodon_degus
ENSCCAG00000028553	-	99	52.751	ENSONIG00000011383	rpf2	100	47.573	Oreochromis_niloticus
ENSCCAG00000028553	-	97	72.425	ENSOCUG00000016028	RPF2	98	65.449	Oryctolagus_cuniculus
ENSCCAG00000028553	-	97	54.237	ENSORLG00000015183	rpf2	98	47.351	Oryzias_latipes
ENSCCAG00000028553	-	99	53.156	ENSORLG00020008756	rpf2	95	46.259	Oryzias_latipes_hni
ENSCCAG00000028553	-	97	54.237	ENSORLG00015003841	RPF2	98	47.351	Oryzias_latipes_hsok
ENSCCAG00000028553	-	99	54.305	ENSOMEG00000011508	rpf2	98	49.007	Oryzias_melastigma
ENSCCAG00000028553	-	98	72.277	ENSOGAG00000007438	RPF2	99	73.267	Otolemur_garnettii
ENSCCAG00000028553	-	98	72.607	ENSOARG00000015548	-	99	65.677	Ovis_aries
ENSCCAG00000028553	-	98	72.607	ENSOARG00000009886	-	99	65.677	Ovis_aries
ENSCCAG00000028553	-	98	66.007	ENSPPAG00000032089	-	100	66.997	Pan_paniscus
ENSCCAG00000028553	-	97	74.419	ENSPPAG00000035622	RPF2	98	67.442	Pan_paniscus
ENSCCAG00000028553	-	92	63.732	ENSPPRG00000008363	-	94	63.732	Panthera_pardus
ENSCCAG00000028553	-	98	72.277	ENSPPRG00000000320	-	99	66.007	Panthera_pardus
ENSCCAG00000028553	-	98	72.277	ENSPTIG00000002060	RPF2	99	66.007	Panthera_tigris_altaica
ENSCCAG00000028553	-	97	74.419	ENSPTRG00000018503	RPF2	98	67.442	Pan_troglodytes
ENSCCAG00000028553	-	97	74.419	ENSPANG00000018834	RPF2	98	67.442	Papio_anubis
ENSCCAG00000028553	-	91	58.571	ENSPKIG00000019506	rpf2	93	57.840	Paramormyrops_kingsleyae
ENSCCAG00000028553	-	95	65.424	ENSPSIG00000014887	RPF2	96	65.424	Pelodiscus_sinensis
ENSCCAG00000028553	-	90	63.028	ENSPEMG00000011413	Rpf2	100	63.028	Peromyscus_maniculatus_bairdii
ENSCCAG00000028553	-	94	68.601	ENSPCIG00000028172	RPF2	96	69.231	Phascolarctos_cinereus
ENSCCAG00000028553	-	98	55.263	ENSPFOG00000003396	rpf2	99	56.250	Poecilia_formosa
ENSCCAG00000028553	-	98	54.605	ENSPLAG00000001226	rpf2	99	55.592	Poecilia_latipinna
ENSCCAG00000028553	-	98	55.263	ENSPMEG00000007781	rpf2	99	56.250	Poecilia_mexicana
ENSCCAG00000028553	-	98	54.934	ENSPREG00000020525	rpf2	99	55.921	Poecilia_reticulata
ENSCCAG00000028553	-	97	74.419	ENSPPYG00000016925	RPF2	98	67.442	Pongo_abelii
ENSCCAG00000028553	-	72	68.557	ENSPCAG00000002562	RPF2	79	68.557	Procavia_capensis
ENSCCAG00000028553	-	97	63.028	ENSPCOG00000012785	RPF2	99	63.763	Propithecus_coquereli
ENSCCAG00000028553	-	77	72.131	ENSPVAG00000003446	RPF2	82	63.889	Pteropus_vampyrus
ENSCCAG00000028553	-	95	54.392	ENSPNAG00000000082	rpf2	96	55.405	Pygocentrus_nattereri
ENSCCAG00000028553	-	98	70.627	ENSRNOG00000000587	Rpf2	99	63.696	Rattus_norvegicus
ENSCCAG00000028553	-	94	72.789	ENSRBIG00000038389	RPF2	99	68.293	Rhinopithecus_bieti
ENSCCAG00000028553	-	86	69.748	ENSRROG00000039510	-	98	68.045	Rhinopithecus_roxellana
ENSCCAG00000028553	-	89	72.428	ENSRROG00000036685	-	93	72.428	Rhinopithecus_roxellana
ENSCCAG00000028553	-	96	74.247	ENSRROG00000036457	RPF2	98	67.224	Rhinopithecus_roxellana
ENSCCAG00000028553	-	79	71.491	ENSRROG00000028992	-	84	71.491	Rhinopithecus_roxellana
ENSCCAG00000028553	-	88	35.439	YKR081C	-	83	35.439	Saccharomyces_cerevisiae
ENSCCAG00000028553	-	95	58.276	ENSSBOG00000025434	-	97	58.478	Saimiri_boliviensis_boliviensis
ENSCCAG00000028553	-	97	60.777	ENSSBOG00000034420	-	98	60.777	Saimiri_boliviensis_boliviensis
ENSCCAG00000028553	-	74	71.000	ENSSBOG00000029182	-	85	71.000	Saimiri_boliviensis_boliviensis
ENSCCAG00000028553	-	70	83.333	ENSSBOG00000030264	-	76	83.333	Saimiri_boliviensis_boliviensis
ENSCCAG00000028553	-	88	67.803	ENSSBOG00000022486	-	94	69.202	Saimiri_boliviensis_boliviensis
ENSCCAG00000028553	-	98	65.789	ENSSHAG00000002212	RPF2	97	68.562	Sarcophilus_harrisii
ENSCCAG00000028553	-	97	52.787	ENSSFOG00015020916	rpf2	84	52.713	Scleropages_formosus
ENSCCAG00000028553	-	98	52.475	ENSSMAG00000017499	rpf2	98	53.465	Scophthalmus_maximus
ENSCCAG00000028553	-	96	53.061	ENSSDUG00000010383	rpf2	93	53.925	Seriola_dumerili
ENSCCAG00000028553	-	99	53.896	ENSSLDG00000022111	rpf2	99	54.545	Seriola_lalandi_dorsalis
ENSCCAG00000028553	-	97	48.837	ENSSARG00000012063	RPF2	98	49.834	Sorex_araneus
ENSCCAG00000028553	-	95	61.644	ENSSPUG00000005108	RPF2	94	62.543	Sphenodon_punctatus
ENSCCAG00000028553	-	99	53.722	ENSSPAG00000008035	rpf2	100	48.544	Stegastes_partitus
ENSCCAG00000028553	-	98	72.607	ENSSSCG00000004394	RPF2	99	65.677	Sus_scrofa
ENSCCAG00000028553	-	94	66.212	ENSTGUG00000012034	RPF2	96	66.212	Taeniopygia_guttata
ENSCCAG00000028553	-	95	53.199	ENSTRUG00000018264	rpf2	96	53.872	Takifugu_rubripes
ENSCCAG00000028553	-	92	57.778	ENSTNIG00000002749	rpf2	92	58.148	Tetraodon_nigroviridis
ENSCCAG00000028553	-	80	64.683	ENSTBEG00000017151	RPF2	82	56.349	Tupaia_belangeri
ENSCCAG00000028553	-	98	71.617	ENSTTRG00000012357	RPF2	99	65.347	Tursiops_truncatus
ENSCCAG00000028553	-	98	72.937	ENSUAMG00000013497	RPF2	99	66.667	Ursus_americanus
ENSCCAG00000028553	-	98	72.607	ENSUMAG00000025488	RPF2	99	66.667	Ursus_maritimus
ENSCCAG00000028553	-	96	71.906	ENSVPAG00000009562	RPF2	98	64.883	Vicugna_pacos
ENSCCAG00000028553	-	91	63.345	ENSVVUG00000021231	-	99	64.413	Vulpes_vulpes
ENSCCAG00000028553	-	98	66.337	ENSVVUG00000006593	-	99	67.327	Vulpes_vulpes
ENSCCAG00000028553	-	93	61.433	ENSXETG00000021335	rpf2	95	62.116	Xenopus_tropicalis
ENSCCAG00000028553	-	98	52.303	ENSXCOG00000001590	rpf2	99	53.289	Xiphophorus_couchianus
ENSCCAG00000028553	-	98	48.355	ENSXMAG00000021706	rpf2	99	49.342	Xiphophorus_maculatus