EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000028584 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 1477 bases
Position: chrKV389949.1:1069030-1070506
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000021564	RRM_1	PF00076.22	1.3e-28	1	2
ENSCCAP00000021564	RRM_1	PF00076.22	1.3e-28	2	2
ENSCCAP00000021556	RRM_1	PF00076.22	1.5e-28	1	2
ENSCCAP00000021556	RRM_1	PF00076.22	1.5e-28	2	2
ENSCCAP00000021580	RRM_1	PF00076.22	6.5e-28	1	2
ENSCCAP00000021580	RRM_1	PF00076.22	6.5e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000039074	-	777	-	ENSCCAP00000021580	258 (aa)	-	A0A2K5R0E8
ENSCCAT00000039058	-	1206	-	ENSCCAP00000021564	401 (aa)	-	A0A2K5R0A1
ENSCCAT00000039050	-	1239	-	ENSCCAP00000021556	412 (aa)	-	A0A2K5R089

Gene Model

Click here to download ENSCCAG00000028584's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000028584's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000028584	-	73	34.722	ENSCCAG00000037306	PABPC4	58	34.722
ENSCCAG00000028584	-	73	36.111	ENSCCAG00000037733	-	64	36.111
ENSCCAG00000028584	-	56	40.816	ENSCCAG00000029074	HNRNPA2B1	61	40.816
ENSCCAG00000028584	-	99	50.763	ENSCCAG00000035313	-	86	46.978
ENSCCAG00000028584	-	55	36.667	ENSCCAG00000019706	-	51	36.667
ENSCCAG00000028584	-	66	32.432	ENSCCAG00000024508	ELAVL2	81	31.579
ENSCCAG00000028584	-	66	34.177	ENSCCAG00000036430	TIA1	58	31.915
ENSCCAG00000028584	-	99	64.259	ENSCCAG00000031689	-	73	65.267
ENSCCAG00000028584	-	60	38.889	ENSCCAG00000031524	-	80	38.889
ENSCCAG00000028584	-	66	30.488	ENSCCAG00000025328	ELAVL1	54	30.488
ENSCCAG00000028584	-	58	33.333	ENSCCAG00000033927	MSI2	52	32.099
ENSCCAG00000028584	-	100	82.528	ENSCCAG00000025114	-	100	79.909
ENSCCAG00000028584	-	66	31.081	ENSCCAG00000024797	ELAVL4	87	31.081
ENSCCAG00000028584	-	65	38.750	ENSCCAG00000023338	PABPC1L	59	38.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000028584	-	100	81.041	ENSG00000100461	RBM23	100	84.211	Homo_sapiens
ENSCCAG00000028584	-	100	78.623	ENSAMEG00000007322	RBM23	100	74.222	Ailuropoda_melanoleuca
ENSCCAG00000028584	-	100	72.161	ENSACAG00000001569	RBM23	96	61.707	Anolis_carolinensis
ENSCCAG00000028584	-	100	68.171	ENSANAG00000033790	-	100	68.409	Aotus_nancymaae
ENSCCAG00000028584	-	60	75.449	ENSANAG00000031466	-	93	75.449	Aotus_nancymaae
ENSCCAG00000028584	-	100	79.496	ENSBTAG00000038333	RBM23	100	70.940	Bos_taurus
ENSCCAG00000028584	-	100	80.741	ENSCJAG00000008482	RBM23	100	78.132	Callithrix_jacchus
ENSCCAG00000028584	-	100	74.815	ENSCAFG00000011217	RBM23	100	69.860	Canis_familiaris
ENSCCAG00000028584	-	100	79.927	ENSCAFG00020007711	RBM23	100	75.281	Canis_lupus_dingo
ENSCCAG00000028584	-	100	78.417	ENSCHIG00000025709	RBM23	100	71.058	Capra_hircus
ENSCCAG00000028584	-	100	81.648	ENSTSYG00000014755	RBM23	100	82.463	Carlito_syrichta
ENSCCAG00000028584	-	100	82.528	ENSCATG00000017832	RBM23	100	79.636	Cercocebus_atys
ENSCCAG00000028584	-	100	80.812	ENSCSAG00000016213	RBM23	100	76.244	Chlorocebus_sabaeus
ENSCCAG00000028584	-	54	85.000	ENSCHOG00000004460	-	51	85.443	Choloepus_hoffmanni
ENSCCAG00000028584	-	98	70.229	ENSCPBG00000026096	RBM23	96	61.916	Chrysemys_picta_bellii
ENSCCAG00000028584	-	100	81.111	ENSCANG00000001893	RBM23	97	75.556	Colobus_angolensis_palliatus
ENSCCAG00000028584	-	100	79.775	ENSDNOG00000032457	RBM23	100	74.828	Dasypus_novemcinctus
ENSCCAG00000028584	-	100	81.784	ENSDORG00000004926	-	100	82.156	Dipodomys_ordii
ENSCCAG00000028584	-	72	54.325	ENSETEG00000017915	-	99	55.017	Echinops_telfairi
ENSCCAG00000028584	-	100	79.853	ENSEASG00005011696	RBM23	90	77.150	Equus_asinus_asinus
ENSCCAG00000028584	-	100	80.586	ENSECAG00000009910	RBM23	100	69.265	Equus_caballus
ENSCCAG00000028584	-	100	75.912	ENSEEUG00000015560	RBM23	100	68.919	Erinaceus_europaeus
ENSCCAG00000028584	-	100	80.292	ENSFCAG00000006632	RBM23	100	75.506	Felis_catus
ENSCCAG00000028584	-	50	65.152	ENSGAGG00000003171	-	85	68.182	Gopherus_agassizii
ENSCCAG00000028584	-	100	81.273	ENSGGOG00000015707	RBM23	100	76.659	Gorilla_gorilla
ENSCCAG00000028584	-	100	73.978	ENSHGLG00100006114	RBM23	99	69.545	Heterocephalus_glaber_male
ENSCCAG00000028584	-	100	81.716	ENSSTOG00000010354	RBM23	100	81.716	Ictidomys_tridecemlineatus
ENSCCAG00000028584	-	99	75.735	ENSLAFG00000018567	RBM23	100	69.575	Loxodonta_africana
ENSCCAG00000028584	-	100	81.550	ENSMFAG00000037595	RBM23	100	76.923	Macaca_fascicularis
ENSCCAG00000028584	-	100	81.550	ENSMMUG00000018381	RBM23	100	76.697	Macaca_mulatta
ENSCCAG00000028584	-	100	82.463	ENSMNEG00000042442	RBM23	100	77.449	Macaca_nemestrina
ENSCCAG00000028584	-	100	76.190	ENSMLEG00000039954	RBM23	100	70.721	Mandrillus_leucophaeus
ENSCCAG00000028584	-	100	82.197	ENSMICG00000006364	RBM23	100	82.197	Microcebus_murinus
ENSCCAG00000028584	-	100	79.182	ENSMODG00000024448	RBM23	100	72.931	Monodelphis_domestica
ENSCCAG00000028584	-	100	80.000	ENSMPUG00000007151	RBM23	100	74.775	Mustela_putorius_furo
ENSCCAG00000028584	-	100	78.571	ENSMLUG00000012923	RBM23	100	70.968	Myotis_lucifugus
ENSCCAG00000028584	-	100	80.882	ENSNLEG00000014792	RBM23	100	76.244	Nomascus_leucogenys
ENSCCAG00000028584	-	100	76.103	ENSOPRG00000001092	RBM23	100	71.946	Ochotona_princeps
ENSCCAG00000028584	-	72	44.262	ENSOANG00000008908	-	100	45.246	Ornithorhynchus_anatinus
ENSCCAG00000028584	-	100	80.220	ENSOCUG00000002006	RBM23	100	73.874	Oryctolagus_cuniculus
ENSCCAG00000028584	-	99	74.912	ENSOGAG00000014794	RBM23	100	68.172	Otolemur_garnettii
ENSCCAG00000028584	-	100	78.777	ENSOARG00000019398	RBM23	100	70.842	Ovis_aries
ENSCCAG00000028584	-	100	79.412	ENSPPAG00000037922	RBM23	100	76.018	Pan_paniscus
ENSCCAG00000028584	-	100	80.292	ENSPPRG00000023344	RBM23	100	75.506	Panthera_pardus
ENSCCAG00000028584	-	100	80.292	ENSPTIG00000007831	RBM23	100	75.964	Panthera_tigris_altaica
ENSCCAG00000028584	-	100	79.044	ENSPTRG00000006151	RBM23	100	75.566	Pan_troglodytes
ENSCCAG00000028584	-	100	81.250	ENSPANG00000001324	RBM23	100	81.250	Papio_anubis
ENSCCAG00000028584	-	100	79.182	ENSPCIG00000027773	RBM23	100	72.284	Phascolarctos_cinereus
ENSCCAG00000028584	-	100	81.784	ENSPPYG00000005649	RBM23	100	74.032	Pongo_abelii
ENSCCAG00000028584	-	92	70.683	ENSPCAG00000006669	RBM23	100	60.227	Procavia_capensis
ENSCCAG00000028584	-	100	82.022	ENSPCOG00000018564	RBM23	100	82.090	Propithecus_coquereli
ENSCCAG00000028584	-	100	79.699	ENSPVAG00000013785	RBM23	100	73.696	Pteropus_vampyrus
ENSCCAG00000028584	-	100	81.181	ENSRBIG00000039276	RBM23	100	76.471	Rhinopithecus_bieti
ENSCCAG00000028584	-	100	81.181	ENSRROG00000044026	RBM23	100	76.471	Rhinopithecus_roxellana
ENSCCAG00000028584	-	100	85.915	ENSSBOG00000023037	-	100	64.055	Saimiri_boliviensis_boliviensis
ENSCCAG00000028584	-	97	70.738	ENSSBOG00000034977	-	99	68.317	Saimiri_boliviensis_boliviensis
ENSCCAG00000028584	-	100	79.182	ENSSHAG00000012932	RBM23	100	72.026	Sarcophilus_harrisii
ENSCCAG00000028584	-	100	75.000	ENSSARG00000005165	RBM23	100	72.870	Sorex_araneus
ENSCCAG00000028584	-	100	71.587	ENSSPUG00000000489	RBM23	96	62.329	Sphenodon_punctatus
ENSCCAG00000028584	-	100	80.443	ENSSSCG00000026700	RBM23	100	75.561	Sus_scrofa
ENSCCAG00000028584	-	100	71.326	ENSTBEG00000011543	RBM23	100	69.757	Tupaia_belangeri
ENSCCAG00000028584	-	100	80.297	ENSTTRG00000001500	RBM23	100	73.589	Tursiops_truncatus
ENSCCAG00000028584	-	100	79.197	ENSUAMG00000008524	RBM23	100	74.888	Ursus_americanus
ENSCCAG00000028584	-	100	79.197	ENSUMAG00000014075	RBM23	100	74.888	Ursus_maritimus
ENSCCAG00000028584	-	54	85.000	ENSVPAG00000000599	-	57	86.857	Vicugna_pacos
ENSCCAG00000028584	-	100	80.292	ENSVVUG00000019815	RBM23	100	75.730	Vulpes_vulpes
ENSCCAG00000028584	-	100	66.296	ENSXETG00000022623	rbm23	100	57.079	Xenopus_tropicalis