EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000028596 (Gene tree)
Gene ID: 108301257
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 81859 bases
Position: chrKV389459.1:4414690-4496548
Accession: 108301257
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000021558	EST1	PF10374.9	8.3e-25	1	1
ENSCCAP00000021583	EST1	PF10374.9	8.7e-25	1	1
ENSCCAP00000021596	EST1	PF10374.9	2.7e-22	1	1
ENSCCAP00000021558	EST1_DNA_bind	PF10373.9	4.8e-56	1	1
ENSCCAP00000021583	EST1_DNA_bind	PF10373.9	4.9e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000039056	SMG7-202	219	-	ENSCCAP00000021562	73 (aa)	-	A0A2K5R090
ENSCCAT00000039092	SMG7-204	555	-	ENSCCAP00000021596	184 (aa)	-	A0A2K5R0D0
ENSCCAT00000039052	SMG7-201	5907	XM_017524363	ENSCCAP00000021558	1136 (aa)	XP_017379852	A0A2K5R098
ENSCCAT00000039077	SMG7-203	8675	XM_017524360	ENSCCAP00000021583	1144 (aa)	XP_017379849	A0A2K5R0C2

Gene Model

Click here to download ENSCCAG00000028596's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000028596's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000028596	SMG7	100	98.690	ENSG00000116698	SMG7	100	98.690	Homo_sapiens
ENSCCAG00000028596	SMG7	86	93.038	ENSAPOG00000009611	smg7	95	74.584	Acanthochromis_polyacanthus
ENSCCAG00000028596	SMG7	100	96.943	ENSAMEG00000002357	SMG7	100	96.943	Ailuropoda_melanoleuca
ENSCCAG00000028596	SMG7	70	94.574	ENSACIG00000015152	smg7	100	64.643	Amphilophus_citrinellus
ENSCCAG00000028596	SMG7	85	92.994	ENSAOCG00000013538	smg7	99	66.809	Amphiprion_ocellaris
ENSCCAG00000028596	SMG7	84	94.194	ENSAPEG00000007851	smg7	99	66.809	Amphiprion_percula
ENSCCAG00000028596	SMG7	86	93.082	ENSATEG00000006931	smg7	99	66.128	Anabas_testudineus
ENSCCAG00000028596	SMG7	100	89.229	ENSAPLG00000015811	SMG7	100	89.054	Anas_platyrhynchos
ENSCCAG00000028596	SMG7	100	87.879	ENSACAG00000014989	SMG7	96	88.398	Anolis_carolinensis
ENSCCAG00000028596	SMG7	100	99.126	ENSANAG00000028114	SMG7	100	99.120	Aotus_nancymaae
ENSCCAG00000028596	SMG7	85	94.231	ENSACLG00000022079	smg7	99	66.209	Astatotilapia_calliptera
ENSCCAG00000028596	SMG7	84	94.194	ENSAMXG00000020809	smg7	99	68.202	Astyanax_mexicanus
ENSCCAG00000028596	SMG7	100	95.866	ENSBTAG00000008003	SMG7	100	95.866	Bos_taurus
ENSCCAG00000028596	SMG7	100	99.126	ENSCJAG00000005135	SMG7	100	99.120	Callithrix_jacchus
ENSCCAG00000028596	SMG7	100	93.362	ENSCAFG00000013276	SMG7	94	93.362	Canis_familiaris
ENSCCAG00000028596	SMG7	99	98.352	ENSCAFG00020015475	SMG7	98	98.352	Canis_lupus_dingo
ENSCCAG00000028596	SMG7	100	92.314	ENSCHIG00000018192	SMG7	96	92.314	Capra_hircus
ENSCCAG00000028596	SMG7	100	97.274	ENSTSYG00000002667	SMG7	100	97.274	Carlito_syrichta
ENSCCAG00000028596	SMG7	100	93.362	ENSCPOG00000008906	SMG7	97	93.362	Cavia_porcellus
ENSCCAG00000028596	SMG7	100	98.913	ENSCATG00000011063	SMG7	100	98.913	Cercocebus_atys
ENSCCAG00000028596	SMG7	100	96.482	ENSCLAG00000010751	SMG7	100	96.482	Chinchilla_lanigera
ENSCCAG00000028596	SMG7	100	94.672	ENSCSAG00000012654	SMG7	94	94.672	Chlorocebus_sabaeus
ENSCCAG00000028596	SMG7	95	85.544	ENSCHOG00000010522	SMG7	93	85.910	Choloepus_hoffmanni
ENSCCAG00000028596	SMG7	100	92.167	ENSCPBG00000015724	SMG7	100	91.762	Chrysemys_picta_bellii
ENSCCAG00000028596	SMG7	85	51.829	ENSCING00000006953	-	94	53.746	Ciona_intestinalis
ENSCCAG00000028596	SMG7	100	98.952	ENSCANG00000015680	SMG7	100	98.952	Colobus_angolensis_palliatus
ENSCCAG00000028596	SMG7	100	94.899	ENSCGRG00001013705	Smg7	100	94.899	Cricetulus_griseus_chok1gshd
ENSCCAG00000028596	SMG7	99	94.854	ENSCGRG00000018401	Smg7	100	94.854	Cricetulus_griseus_crigri
ENSCCAG00000028596	SMG7	85	89.172	ENSCSEG00000007392	-	89	89.172	Cynoglossus_semilaevis
ENSCCAG00000028596	SMG7	80	88.000	ENSCVAG00000011842	smg7	96	69.500	Cyprinodon_variegatus
ENSCCAG00000028596	SMG7	84	94.839	ENSDARG00000060767	smg7	99	67.761	Danio_rerio
ENSCCAG00000028596	SMG7	100	92.227	ENSDORG00000007331	Smg7	100	88.374	Dipodomys_ordii
ENSCCAG00000028596	SMG7	97	92.058	ENSETEG00000002654	SMG7	100	88.174	Echinops_telfairi
ENSCCAG00000028596	SMG7	100	93.624	ENSEASG00005006524	SMG7	100	89.722	Equus_asinus_asinus
ENSCCAG00000028596	SMG7	100	93.712	ENSECAG00000004313	SMG7	99	93.611	Equus_caballus
ENSCCAG00000028596	SMG7	97	92.606	ENSEEUG00000002024	SMG7	91	92.606	Erinaceus_europaeus
ENSCCAG00000028596	SMG7	85	94.268	ENSELUG00000010293	smg7	99	65.959	Esox_lucius
ENSCCAG00000028596	SMG7	100	93.450	ENSFCAG00000010900	SMG7	99	93.129	Felis_catus
ENSCCAG00000028596	SMG7	100	86.273	ENSFALG00000003047	SMG7	98	86.186	Ficedula_albicollis
ENSCCAG00000028596	SMG7	100	93.100	ENSFDAG00000012121	SMG7	97	93.100	Fukomys_damarensis
ENSCCAG00000028596	SMG7	85	89.809	ENSFHEG00000011073	smg7	99	64.109	Fundulus_heteroclitus
ENSCCAG00000028596	SMG7	85	90.446	ENSGMOG00000004916	smg7	85	73.727	Gadus_morhua
ENSCCAG00000028596	SMG7	100	89.589	ENSGALG00000004667	SMG7	100	89.414	Gallus_gallus
ENSCCAG00000028596	SMG7	95	85.475	ENSGAFG00000019000	smg7	99	64.544	Gambusia_affinis
ENSCCAG00000028596	SMG7	85	91.720	ENSGACG00000001634	smg7	99	63.357	Gasterosteus_aculeatus
ENSCCAG00000028596	SMG7	99	86.264	ENSGAGG00000024208	-	94	86.264	Gopherus_agassizii
ENSCCAG00000028596	SMG7	100	98.603	ENSGGOG00000002342	SMG7	100	98.603	Gorilla_gorilla
ENSCCAG00000028596	SMG7	86	93.038	ENSHBUG00000003726	smg7	92	73.096	Haplochromis_burtoni
ENSCCAG00000028596	SMG7	100	97.098	ENSHGLG00000009353	SMG7	100	97.098	Heterocephalus_glaber_female
ENSCCAG00000028596	SMG7	100	97.186	ENSHGLG00100009637	-	100	97.186	Heterocephalus_glaber_male
ENSCCAG00000028596	SMG7	100	82.620	ENSHGLG00100004878	-	100	82.140	Heterocephalus_glaber_male
ENSCCAG00000028596	SMG7	92	80.702	ENSHCOG00000012804	-	91	81.871	Hippocampus_comes
ENSCCAG00000028596	SMG7	84	94.194	ENSIPUG00000016997	smg7	99	68.499	Ictalurus_punctatus
ENSCCAG00000028596	SMG7	100	93.974	ENSSTOG00000000401	SMG7	100	93.931	Ictidomys_tridecemlineatus
ENSCCAG00000028596	SMG7	96	85.311	ENSJJAG00000000309	-	100	85.311	Jaculus_jaculus
ENSCCAG00000028596	SMG7	100	91.608	ENSJJAG00000012351	Smg7	100	87.690	Jaculus_jaculus
ENSCCAG00000028596	SMG7	72	93.182	ENSKMAG00000004900	smg7	100	62.467	Kryptolebias_marmoratus
ENSCCAG00000028596	SMG7	52	62.833	ENSLBEG00000005220	-	75	62.833	Labrus_bergylta
ENSCCAG00000028596	SMG7	86	91.195	ENSLBEG00000002983	smg7	99	66.235	Labrus_bergylta
ENSCCAG00000028596	SMG7	89	91.463	ENSLACG00000000972	SMG7	99	75.608	Latimeria_chalumnae
ENSCCAG00000028596	SMG7	86	94.340	ENSLOCG00000002010	smg7	99	67.164	Lepisosteus_oculatus
ENSCCAG00000028596	SMG7	100	93.100	ENSLAFG00000008186	SMG7	96	93.100	Loxodonta_africana
ENSCCAG00000028596	SMG7	100	98.913	ENSMFAG00000031653	SMG7	100	98.913	Macaca_fascicularis
ENSCCAG00000028596	SMG7	100	98.865	ENSMMUG00000018458	SMG7	99	97.963	Macaca_mulatta
ENSCCAG00000028596	SMG7	100	98.913	ENSMNEG00000034798	SMG7	100	98.913	Macaca_nemestrina
ENSCCAG00000028596	SMG7	100	98.865	ENSMLEG00000037170	SMG7	100	98.865	Mandrillus_leucophaeus
ENSCCAG00000028596	SMG7	85	92.357	ENSMAMG00000018733	smg7	85	65.631	Mastacembelus_armatus
ENSCCAG00000028596	SMG7	85	94.231	ENSMZEG00005015247	smg7	99	65.783	Maylandia_zebra
ENSCCAG00000028596	SMG7	97	89.388	ENSMGAG00000001561	SMG7	98	89.209	Meleagris_gallopavo
ENSCCAG00000028596	SMG7	100	95.163	ENSMAUG00000019484	Smg7	100	95.163	Mesocricetus_auratus
ENSCCAG00000028596	SMG7	100	98.241	ENSMICG00000007145	SMG7	100	98.241	Microcebus_murinus
ENSCCAG00000028596	SMG7	100	95.163	ENSMOCG00000020748	Smg7	100	95.163	Microtus_ochrogaster
ENSCCAG00000028596	SMG7	88	89.441	ENSMMOG00000001524	smg7	99	64.818	Mola_mola
ENSCCAG00000028596	SMG7	92	93.169	ENSMODG00000007139	SMG7	99	93.169	Monodelphis_domestica
ENSCCAG00000028596	SMG7	85	92.994	ENSMALG00000000061	smg7	93	66.093	Monopterus_albus
ENSCCAG00000028596	SMG7	100	94.811	MGP_CAROLIEiJ_G0014704	Smg7	100	94.547	Mus_caroli
ENSCCAG00000028596	SMG7	100	94.723	ENSMUSG00000042772	Smg7	100	94.723	Mus_musculus
ENSCCAG00000028596	SMG7	100	94.811	MGP_PahariEiJ_G0027940	Smg7	100	94.811	Mus_pahari
ENSCCAG00000028596	SMG7	100	94.811	MGP_SPRETEiJ_G0015511	Smg7	100	94.811	Mus_spretus
ENSCCAG00000028596	SMG7	100	93.450	ENSMPUG00000011732	SMG7	95	93.450	Mustela_putorius_furo
ENSCCAG00000028596	SMG7	100	92.751	ENSMLUG00000015417	SMG7	96	92.751	Myotis_lucifugus
ENSCCAG00000028596	SMG7	100	96.218	ENSNGAG00000009836	Smg7	100	96.218	Nannospalax_galili
ENSCCAG00000028596	SMG7	98	61.184	ENSNBRG00000024343	smg7	94	70.952	Neolamprologus_brichardi
ENSCCAG00000028596	SMG7	100	98.865	ENSNLEG00000018018	SMG7	100	98.865	Nomascus_leucogenys
ENSCCAG00000028596	SMG7	71	93.089	ENSMEUG00000004681	SMG7	73	93.089	Notamacropus_eugenii
ENSCCAG00000028596	SMG7	85	96.178	ENSOPRG00000013942	SMG7	96	78.002	Ochotona_princeps
ENSCCAG00000028596	SMG7	100	97.010	ENSODEG00000010390	SMG7	100	97.010	Octodon_degus
ENSCCAG00000028596	SMG7	84	94.194	ENSONIG00000000277	smg7	99	65.751	Oreochromis_niloticus
ENSCCAG00000028596	SMG7	100	87.478	ENSOANG00000000994	SMG7	98	87.391	Ornithorhynchus_anatinus
ENSCCAG00000028596	SMG7	100	86.114	ENSOCUG00000005887	SMG7	90	86.288	Oryctolagus_cuniculus
ENSCCAG00000028596	SMG7	97	83.240	ENSORLG00000007314	smg7	81	83.240	Oryzias_latipes
ENSCCAG00000028596	SMG7	85	91.083	ENSORLG00020015779	smg7	82	82.418	Oryzias_latipes_hni
ENSCCAG00000028596	SMG7	89	87.805	ENSORLG00015012289	smg7	99	63.676	Oryzias_latipes_hsok
ENSCCAG00000028596	SMG7	85	91.083	ENSOMEG00000002328	smg7	99	62.331	Oryzias_melastigma
ENSCCAG00000028596	SMG7	97	92.148	ENSOGAG00000003107	SMG7	90	92.058	Otolemur_garnettii
ENSCCAG00000028596	SMG7	100	92.052	ENSOARG00000001352	SMG7	100	91.957	Ovis_aries
ENSCCAG00000028596	SMG7	100	98.865	ENSPPAG00000031619	SMG7	100	98.865	Pan_paniscus
ENSCCAG00000028596	SMG7	100	97.713	ENSPPRG00000011222	SMG7	100	97.713	Panthera_pardus
ENSCCAG00000028596	SMG7	100	97.642	ENSPTIG00000007242	SMG7	100	97.642	Panthera_tigris_altaica
ENSCCAG00000028596	SMG7	100	98.865	ENSPTRG00000001764	SMG7	100	98.865	Pan_troglodytes
ENSCCAG00000028596	SMG7	100	98.857	ENSPANG00000004520	SMG7	100	98.857	Papio_anubis
ENSCCAG00000028596	SMG7	88	90.123	ENSPKIG00000007242	smg7	99	65.905	Paramormyrops_kingsleyae
ENSCCAG00000028596	SMG7	98	91.071	ENSPSIG00000012201	SMG7	100	90.804	Pelodiscus_sinensis
ENSCCAG00000028596	SMG7	86	86.076	ENSPMGG00000002179	-	90	83.951	Periophthalmus_magnuspinnatus
ENSCCAG00000028596	SMG7	59	58.163	ENSPMGG00000021833	smg7	89	57.500	Periophthalmus_magnuspinnatus
ENSCCAG00000028596	SMG7	100	91.092	ENSPEMG00000011315	Smg7	99	91.755	Peromyscus_maniculatus_bairdii
ENSCCAG00000028596	SMG7	100	93.717	ENSPCIG00000003786	SMG7	100	93.497	Phascolarctos_cinereus
ENSCCAG00000028596	SMG7	85	90.446	ENSPFOG00000019219	smg7	99	61.913	Poecilia_formosa
ENSCCAG00000028596	SMG7	85	90.446	ENSPLAG00000001446	smg7	99	64.660	Poecilia_latipinna
ENSCCAG00000028596	SMG7	85	90.446	ENSPMEG00000005218	smg7	99	63.943	Poecilia_mexicana
ENSCCAG00000028596	SMG7	85	89.809	ENSPREG00000019039	smg7	91	61.736	Poecilia_reticulata
ENSCCAG00000028596	SMG7	100	98.945	ENSPPYG00000000427	SMG7	100	98.945	Pongo_abelii
ENSCCAG00000028596	SMG7	97	81.695	ENSPCAG00000008360	SMG7	92	81.695	Procavia_capensis
ENSCCAG00000028596	SMG7	98	98.889	ENSPCOG00000011996	SMG7	100	94.195	Propithecus_coquereli
ENSCCAG00000028596	SMG7	85	98.077	ENSPVAG00000000851	SMG7	86	87.369	Pteropus_vampyrus
ENSCCAG00000028596	SMG7	85	94.231	ENSPNYG00000007643	smg7	99	66.064	Pundamilia_nyererei
ENSCCAG00000028596	SMG7	89	91.463	ENSPNAG00000011374	smg7	99	68.398	Pygocentrus_nattereri
ENSCCAG00000028596	SMG7	100	94.764	ENSRNOG00000027962	Smg7	100	94.764	Rattus_norvegicus
ENSCCAG00000028596	SMG7	100	98.952	ENSRBIG00000036316	SMG7	100	98.952	Rhinopithecus_bieti
ENSCCAG00000028596	SMG7	100	98.952	ENSRROG00000035719	SMG7	100	98.952	Rhinopithecus_roxellana
ENSCCAG00000028596	SMG7	100	99.388	ENSSBOG00000023454	SMG7	100	99.388	Saimiri_boliviensis_boliviensis
ENSCCAG00000028596	SMG7	100	93.152	ENSSHAG00000013147	SMG7	100	92.888	Sarcophilus_harrisii
ENSCCAG00000028596	SMG7	84	92.903	ENSSFOG00015017252	smg7	96	76.842	Scleropages_formosus
ENSCCAG00000028596	SMG7	85	92.994	ENSSMAG00000006067	smg7	99	66.207	Scophthalmus_maximus
ENSCCAG00000028596	SMG7	86	93.038	ENSSDUG00000017543	smg7	99	65.763	Seriola_dumerili
ENSCCAG00000028596	SMG7	86	93.038	ENSSLDG00000003750	-	95	94.304	Seriola_lalandi_dorsalis
ENSCCAG00000028596	SMG7	99	90.636	ENSSPUG00000002064	SMG7	99	90.459	Sphenodon_punctatus
ENSCCAG00000028596	SMG7	77	94.326	ENSSPAG00000008733	smg7	100	65.862	Stegastes_partitus
ENSCCAG00000028596	SMG7	100	93.404	ENSSSCG00000015558	SMG7	100	93.404	Sus_scrofa
ENSCCAG00000028596	SMG7	99	89.594	ENSTGUG00000003928	SMG7	100	89.506	Taeniopygia_guttata
ENSCCAG00000028596	SMG7	95	82.857	ENSTRUG00000003612	-	95	82.857	Takifugu_rubripes
ENSCCAG00000028596	SMG7	84	89.103	ENSTNIG00000002802	smg7	99	59.299	Tetraodon_nigroviridis
ENSCCAG00000028596	SMG7	78	96.186	ENSTBEG00000003220	SMG7	72	96.186	Tupaia_belangeri
ENSCCAG00000028596	SMG7	97	92.960	ENSTTRG00000014778	SMG7	91	92.960	Tursiops_truncatus
ENSCCAG00000028596	SMG7	96	93.425	ENSUAMG00000017473	SMG7	100	93.425	Ursus_americanus
ENSCCAG00000028596	SMG7	100	93.537	ENSUMAG00000016389	SMG7	100	93.537	Ursus_maritimus
ENSCCAG00000028596	SMG7	100	93.492	ENSVVUG00000008976	SMG7	100	93.492	Vulpes_vulpes
ENSCCAG00000028596	SMG7	84	92.258	ENSXETG00000012528	smg7	100	71.032	Xenopus_tropicalis
ENSCCAG00000028596	SMG7	85	91.083	ENSXMAG00000007123	smg7	99	64.625	Xiphophorus_maculatus