EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000028735 (Gene tree)
Gene ID: 108284750
Gene Symbol: -
Alias: -
Full Name: G-rich RNA sequence binding factor 1
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 17766 bases
Position: chrKV389709.1:2077600-2095365
Accession: 108284750
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000021814	RRM_1	PF00076.22	1.4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000039309	-	1786	XM_017501637	ENSCCAP00000021814	479 (aa)	XP_017357126	A0A2K5R0Z8

Gene Model

Click here to download ENSCCAG00000028735's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000028735's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000028735	-	70	63.158	ENSCCAG00000026563	HNRNPH1	80	46.970
ENSCCAG00000028735	-	51	66.234	ENSCCAG00000028531	HNRNPH3	75	39.773
ENSCCAG00000028735	-	70	37.209	ENSCCAG00000028687	-	86	37.209
ENSCCAG00000028735	-	69	84.942	ENSCCAG00000024189	-	95	74.839
ENSCCAG00000028735	-	70	41.322	ENSCCAG00000031457	-	87	41.322

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000028735	-	100	94.167	ENSG00000132463	GRSF1	100	96.541	Homo_sapiens
ENSCCAG00000028735	-	76	95.028	ENSAMEG00000005896	GRSF1	100	95.028	Ailuropoda_melanoleuca
ENSCCAG00000028735	-	99	62.083	ENSACAG00000012921	GRSF1	91	61.066	Anolis_carolinensis
ENSCCAG00000028735	-	100	98.121	ENSANAG00000022114	GRSF1	100	98.121	Aotus_nancymaae
ENSCCAG00000028735	-	100	92.100	ENSBTAG00000008577	GRSF1	99	94.183	Bos_taurus
ENSCCAG00000028735	-	100	97.704	ENSCJAG00000014477	GRSF1	100	97.704	Callithrix_jacchus
ENSCCAG00000028735	-	69	95.730	ENSCAFG00000002922	GRSF1	100	95.730	Canis_familiaris
ENSCCAG00000028735	-	100	92.547	ENSCAFG00020027060	GRSF1	100	97.619	Canis_lupus_dingo
ENSCCAG00000028735	-	100	92.292	ENSCHIG00000021580	GRSF1	100	92.292	Capra_hircus
ENSCCAG00000028735	-	76	96.685	ENSTSYG00000008487	-	100	97.170	Carlito_syrichta
ENSCCAG00000028735	-	99	65.136	ENSTSYG00000028860	-	99	79.167	Carlito_syrichta
ENSCCAG00000028735	-	69	89.935	ENSCAPG00000000156	GRSF1	100	89.935	Cavia_aperea
ENSCCAG00000028735	-	100	82.881	ENSCPOG00000011662	GRSF1	100	89.474	Cavia_porcellus
ENSCCAG00000028735	-	100	96.451	ENSCATG00000035808	GRSF1	100	96.451	Cercocebus_atys
ENSCCAG00000028735	-	75	88.366	ENSCLAG00000003057	GRSF1	100	88.366	Chinchilla_lanigera
ENSCCAG00000028735	-	100	96.033	ENSCSAG00000004856	GRSF1	100	96.033	Chlorocebus_sabaeus
ENSCCAG00000028735	-	100	65.417	ENSCPBG00000019502	GRSF1	86	67.562	Chrysemys_picta_bellii
ENSCCAG00000028735	-	69	97.484	ENSCANG00000037992	GRSF1	100	97.484	Colobus_angolensis_palliatus
ENSCCAG00000028735	-	100	89.206	ENSCGRG00001019953	Grsf1	99	92.798	Cricetulus_griseus_chok1gshd
ENSCCAG00000028735	-	75	92.798	ENSCGRG00000005357	Grsf1	100	92.798	Cricetulus_griseus_crigri
ENSCCAG00000028735	-	75	93.906	ENSDORG00000015145	Grsf1	100	96.350	Dipodomys_ordii
ENSCCAG00000028735	-	72	93.333	ENSETEG00000013786	GRSF1	100	93.333	Echinops_telfairi
ENSCCAG00000028735	-	100	94.583	ENSEASG00005016685	GRSF1	94	94.167	Equus_asinus_asinus
ENSCCAG00000028735	-	100	94.363	ENSECAG00000024208	GRSF1	94	94.363	Equus_caballus
ENSCCAG00000028735	-	76	41.096	ENSELUG00000011613	-	91	41.096	Esox_lucius
ENSCCAG00000028735	-	100	93.946	ENSFCAG00000007270	GRSF1	100	93.946	Felis_catus
ENSCCAG00000028735	-	70	54.493	ENSFALG00000008394	GRSF1	98	54.493	Ficedula_albicollis
ENSCCAG00000028735	-	53	89.781	ENSFDAG00000008167	-	100	89.781	Fukomys_damarensis
ENSCCAG00000028735	-	78	48.541	ENSGALG00000031160	GRSF1	77	48.806	Gallus_gallus
ENSCCAG00000028735	-	100	65.975	ENSGAGG00000006013	GRSF1	99	67.842	Gopherus_agassizii
ENSCCAG00000028735	-	69	96.226	ENSGGOG00000014852	-	100	96.226	Gorilla_gorilla
ENSCCAG00000028735	-	100	83.090	ENSHGLG00000000661	GRSF1	100	88.089	Heterocephalus_glaber_female
ENSCCAG00000028735	-	75	88.089	ENSHGLG00100005974	GRSF1	100	92.701	Heterocephalus_glaber_male
ENSCCAG00000028735	-	90	91.864	ENSSTOG00000011569	GRSF1	100	97.674	Ictidomys_tridecemlineatus
ENSCCAG00000028735	-	74	88.986	ENSJJAG00000005325	Grsf1	100	93.431	Jaculus_jaculus
ENSCCAG00000028735	-	80	49.610	ENSLACG00000009507	GRSF1	97	53.541	Latimeria_chalumnae
ENSCCAG00000028735	-	75	47.253	ENSLOCG00000011589	GRSF1	80	47.253	Lepisosteus_oculatus
ENSCCAG00000028735	-	100	90.909	ENSLAFG00000017032	-	100	91.116	Loxodonta_africana
ENSCCAG00000028735	-	100	96.242	ENSMFAG00000037346	GRSF1	100	96.242	Macaca_fascicularis
ENSCCAG00000028735	-	100	96.242	ENSMMUG00000000380	GRSF1	99	97.403	Macaca_mulatta
ENSCCAG00000028735	-	100	90.188	ENSMNEG00000023162	GRSF1	100	90.188	Macaca_nemestrina
ENSCCAG00000028735	-	75	96.676	ENSMLEG00000007180	GRSF1	99	97.419	Mandrillus_leucophaeus
ENSCCAG00000028735	-	70	51.632	ENSMGAG00000009940	GRSF1	98	51.632	Meleagris_gallopavo
ENSCCAG00000028735	-	100	91.858	ENSMICG00000005385	GRSF1	99	94.490	Microcebus_murinus
ENSCCAG00000028735	-	58	97.080	ENSMOCG00000012769	-	100	97.080	Microtus_ochrogaster
ENSCCAG00000028735	-	100	80.206	ENSMODG00000019088	GRSF1	90	79.794	Monodelphis_domestica
ENSCCAG00000028735	-	100	91.232	MGP_CAROLIEiJ_G0027377	Grsf1	100	95.620	Mus_caroli
ENSCCAG00000028735	-	100	91.232	ENSMUSG00000044221	Grsf1	100	95.620	Mus_musculus
ENSCCAG00000028735	-	100	89.770	MGP_PahariEiJ_G0017155	Grsf1	100	94.161	Mus_pahari
ENSCCAG00000028735	-	100	90.814	MGP_SPRETEiJ_G0028374	Grsf1	99	92.798	Mus_spretus
ENSCCAG00000028735	-	76	94.262	ENSMPUG00000009499	GRSF1	97	94.262	Mustela_putorius_furo
ENSCCAG00000028735	-	76	91.233	ENSMLUG00000028158	GRSF1	100	91.233	Myotis_lucifugus
ENSCCAG00000028735	-	58	96.350	ENSNGAG00000022132	-	100	96.350	Nannospalax_galili
ENSCCAG00000028735	-	94	95.793	ENSNLEG00000007721	-	99	95.484	Nomascus_leucogenys
ENSCCAG00000028735	-	75	73.184	ENSMEUG00000015942	GRSF1	99	73.184	Notamacropus_eugenii
ENSCCAG00000028735	-	74	91.667	ENSOPRG00000010148	-	78	91.667	Ochotona_princeps
ENSCCAG00000028735	-	75	77.285	ENSODEG00000004897	-	100	77.285	Octodon_degus
ENSCCAG00000028735	-	71	78.655	ENSODEG00000010775	-	100	78.655	Octodon_degus
ENSCCAG00000028735	-	100	83.507	ENSODEG00000001826	-	100	83.716	Octodon_degus
ENSCCAG00000028735	-	70	63.008	ENSOANG00000013696	-	100	63.008	Ornithorhynchus_anatinus
ENSCCAG00000028735	-	98	80.753	ENSOCUG00000010029	GRSF1	100	79.574	Oryctolagus_cuniculus
ENSCCAG00000028735	-	76	90.411	ENSOGAG00000000141	-	100	90.411	Otolemur_garnettii
ENSCCAG00000028735	-	99	72.304	ENSOGAG00000026370	-	99	71.882	Otolemur_garnettii
ENSCCAG00000028735	-	76	93.151	ENSOARG00000011898	GRSF1	100	93.151	Ovis_aries
ENSCCAG00000028735	-	69	96.541	ENSPPAG00000042456	-	100	96.541	Pan_paniscus
ENSCCAG00000028735	-	100	93.946	ENSPPRG00000022913	GRSF1	100	93.946	Panthera_pardus
ENSCCAG00000028735	-	76	94.199	ENSPTIG00000008060	GRSF1	99	94.460	Panthera_tigris_altaica
ENSCCAG00000028735	-	98	93.658	ENSPTRG00000016136	GRSF1	99	96.129	Pan_troglodytes
ENSCCAG00000028735	-	100	95.825	ENSPANG00000018597	GRSF1	99	96.452	Papio_anubis
ENSCCAG00000028735	-	73	74.129	ENSPSIG00000014267	-	96	74.129	Pelodiscus_sinensis
ENSCCAG00000028735	-	75	93.906	ENSPEMG00000012814	Grsf1	99	93.906	Peromyscus_maniculatus_bairdii
ENSCCAG00000028735	-	100	80.665	ENSPCIG00000000627	GRSF1	100	80.873	Phascolarctos_cinereus
ENSCCAG00000028735	-	100	79.210	ENSPPYG00000014812	GRSF1	100	79.210	Pongo_abelii
ENSCCAG00000028735	-	99	86.047	ENSPCAG00000013949	GRSF1	100	85.201	Procavia_capensis
ENSCCAG00000028735	-	100	85.595	ENSPVAG00000004338	GRSF1	100	85.177	Pteropus_vampyrus
ENSCCAG00000028735	-	100	90.188	ENSRNOG00000003392	Grsf1	100	90.188	Rattus_norvegicus
ENSCCAG00000028735	-	100	96.033	ENSRBIG00000036494	GRSF1	99	97.419	Rhinopithecus_bieti
ENSCCAG00000028735	-	100	95.825	ENSRROG00000035735	GRSF1	99	97.097	Rhinopithecus_roxellana
ENSCCAG00000028735	-	69	96.753	ENSSBOG00000032141	GRSF1	100	71.787	Saimiri_boliviensis_boliviensis
ENSCCAG00000028735	-	78	84.225	ENSSHAG00000018365	GRSF1	97	84.225	Sarcophilus_harrisii
ENSCCAG00000028735	-	69	95.130	ENSSARG00000011681	GRSF1	100	95.130	Sorex_araneus
ENSCCAG00000028735	-	98	57.051	ENSSPUG00000007576	GRSF1	99	58.495	Sphenodon_punctatus
ENSCCAG00000028735	-	100	92.276	ENSSSCG00000008940	GRSF1	100	92.276	Sus_scrofa
ENSCCAG00000028735	-	71	54.467	ENSTGUG00000001644	GRSF1	99	54.467	Taeniopygia_guttata
ENSCCAG00000028735	-	69	95.779	ENSTBEG00000010173	GRSF1	100	95.779	Tupaia_belangeri
ENSCCAG00000028735	-	81	89.175	ENSTTRG00000008405	GRSF1	97	89.239	Tursiops_truncatus
ENSCCAG00000028735	-	74	96.911	ENSUAMG00000008901	GRSF1	93	96.911	Ursus_americanus
ENSCCAG00000028735	-	85	87.745	ENSUMAG00000003757	GRSF1	87	95.580	Ursus_maritimus
ENSCCAG00000028735	-	75	80.886	ENSVPAG00000011889	GRSF1	100	80.886	Vicugna_pacos
ENSCCAG00000028735	-	72	95.349	ENSVVUG00000004150	GRSF1	100	95.349	Vulpes_vulpes
ENSCCAG00000028735	-	75	50.954	ENSXETG00000013850	grsf1	100	50.284	Xenopus_tropicalis