EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000028906 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 4724 bases
Position: chrKV389929.1:537885-542608
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000022228	Brix	PF04427.18	1e-31	1	1
ENSCCAP00000022220	Brix	PF04427.18	1.3e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000039717	-	831	-	ENSCCAP00000022220	276 (aa)	-	A0A2K5R295
ENSCCAT00000039725	-	681	-	ENSCCAP00000022228	226 (aa)	-	A0A2K5R254

Gene Model

Click here to download ENSCCAG00000028906's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000028906's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000028906	-	96	83.406	ENSCCAG00000030864	-	95	79.655
ENSCCAG00000028906	-	96	81.659	ENSCCAG00000030365	-	95	77.740
ENSCCAG00000028906	-	96	65.789	ENSCCAG00000028553	-	97	61.356

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000028906	-	96	83.843	ENSG00000197498	RPF2	100	84.112	Homo_sapiens
ENSCCAG00000028906	-	97	64.069	ENSAPOG00000005714	rpf2	85	65.019	Acanthochromis_polyacanthus
ENSCCAG00000028906	-	96	82.533	ENSAMEG00000015753	RPF2	95	77.586	Ailuropoda_melanoleuca
ENSCCAG00000028906	-	97	63.636	ENSAOCG00000005173	rpf2	85	64.639	Amphiprion_ocellaris
ENSCCAG00000028906	-	97	63.636	ENSAPEG00000004003	rpf2	85	64.639	Amphiprion_percula
ENSCCAG00000028906	-	98	64.378	ENSATEG00000012818	rpf2	86	63.878	Anabas_testudineus
ENSCCAG00000028906	-	96	72.489	ENSAPLG00000008812	RPF2	95	73.846	Anas_platyrhynchos
ENSCCAG00000028906	-	96	69.869	ENSACAG00000011270	RPF2	90	67.616	Anolis_carolinensis
ENSCCAG00000028906	-	98	78.378	ENSANAG00000025459	-	99	78.244	Aotus_nancymaae
ENSCCAG00000028906	-	96	81.735	ENSANAG00000026549	-	95	78.214	Aotus_nancymaae
ENSCCAG00000028906	-	96	76.419	ENSANAG00000034834	-	95	73.630	Aotus_nancymaae
ENSCCAG00000028906	-	98	63.948	ENSANAG00000021067	-	94	58.966	Aotus_nancymaae
ENSCCAG00000028906	-	97	68.534	ENSANAG00000033736	-	95	70.213	Aotus_nancymaae
ENSCCAG00000028906	-	96	63.596	ENSAMXG00000035201	rpf2	85	63.118	Astyanax_mexicanus
ENSCCAG00000028906	-	96	82.533	ENSBTAG00000016584	RPF2	95	77.586	Bos_taurus
ENSCCAG00000028906	-	95	37.262	WBGene00021830	Y54E10A.10	86	37.262	Caenorhabditis_elegans
ENSCCAG00000028906	-	96	82.969	ENSCJAG00000038330	RPF2	98	82.773	Callithrix_jacchus
ENSCCAG00000028906	-	96	81.223	ENSCAFG00000003918	RPF2	95	77.586	Canis_familiaris
ENSCCAG00000028906	-	96	81.279	ENSCHIG00000022499	RPF2	95	76.429	Capra_hircus
ENSCCAG00000028906	-	97	79.310	ENSTSYG00000013924	RPF2	95	74.138	Carlito_syrichta
ENSCCAG00000028906	-	91	69.082	ENSCAPG00000014257	RPF2	94	63.309	Cavia_aperea
ENSCCAG00000028906	-	96	81.223	ENSCPOG00000006797	RPF2	95	77.241	Cavia_porcellus
ENSCCAG00000028906	-	85	79.803	ENSCATG00000034352	-	94	65.693	Cercocebus_atys
ENSCCAG00000028906	-	95	67.100	ENSCATG00000029725	-	94	67.704	Cercocebus_atys
ENSCCAG00000028906	-	97	64.557	ENSCLAG00000010874	-	97	65.306	Chinchilla_lanigera
ENSCCAG00000028906	-	96	81.223	ENSCLAG00000010393	-	95	76.897	Chinchilla_lanigera
ENSCCAG00000028906	-	87	56.931	ENSCLAG00000013252	-	99	56.818	Chinchilla_lanigera
ENSCCAG00000028906	-	98	75.966	ENSCHOG00000005865	RPF2	95	71.379	Choloepus_hoffmanni
ENSCCAG00000028906	-	96	74.672	ENSCPBG00000006504	RPF2	86	74.525	Chrysemys_picta_bellii
ENSCCAG00000028906	-	99	51.915	ENSCING00000008090	-	88	52.768	Ciona_intestinalis
ENSCCAG00000028906	-	95	52.212	ENSCSAVG00000010672	-	89	52.852	Ciona_savignyi
ENSCCAG00000028906	-	96	83.406	ENSCANG00000030665	RPF2	95	78.621	Colobus_angolensis_palliatus
ENSCCAG00000028906	-	98	80.258	ENSCGRG00001007331	-	95	74.828	Cricetulus_griseus_chok1gshd
ENSCCAG00000028906	-	98	63.519	ENSCGRG00001005262	-	94	60.204	Cricetulus_griseus_chok1gshd
ENSCCAG00000028906	-	98	80.258	ENSCGRG00000006083	Rpf2	94	74.828	Cricetulus_griseus_crigri
ENSCCAG00000028906	-	96	63.596	ENSCSEG00000015725	rpf2	89	63.433	Cynoglossus_semilaevis
ENSCCAG00000028906	-	98	63.090	ENSCVAG00000001072	rpf2	86	63.118	Cyprinodon_variegatus
ENSCCAG00000028906	-	97	64.069	ENSDARG00000043960	rpf2	90	62.143	Danio_rerio
ENSCCAG00000028906	-	61	84.058	ENSDNOG00000039270	RPF2	98	76.119	Dasypus_novemcinctus
ENSCCAG00000028906	-	60	86.076	ENSDORG00000026915	Rpf2	92	83.871	Dipodomys_ordii
ENSCCAG00000028906	-	86	45.641	FBgn0038585	Non3	71	46.696	Drosophila_melanogaster
ENSCCAG00000028906	-	99	47.458	ENSEBUG00000003640	rpf2	79	48.846	Eptatretus_burgeri
ENSCCAG00000028906	-	96	79.646	ENSEASG00005006927	-	95	75.261	Equus_asinus_asinus
ENSCCAG00000028906	-	96	82.969	ENSECAG00000017121	RPF2	95	78.276	Equus_caballus
ENSCCAG00000028906	-	98	60.944	ENSEEUG00000006169	RPF2	97	60.345	Erinaceus_europaeus
ENSCCAG00000028906	-	95	64.602	ENSELUG00000018518	rpf2	90	62.230	Esox_lucius
ENSCCAG00000028906	-	96	81.223	ENSFCAG00000001527	RPF2	95	77.586	Felis_catus
ENSCCAG00000028906	-	96	74.672	ENSFALG00000010816	RPF2	91	71.631	Ficedula_albicollis
ENSCCAG00000028906	-	96	67.742	ENSFDAG00000016721	-	95	68.699	Fukomys_damarensis
ENSCCAG00000028906	-	96	80.786	ENSFDAG00000005811	-	95	76.552	Fukomys_damarensis
ENSCCAG00000028906	-	97	63.636	ENSFHEG00000011243	rpf2	85	64.259	Fundulus_heteroclitus
ENSCCAG00000028906	-	98	52.564	ENSGMOG00000002521	rpf2	88	52.364	Gadus_morhua
ENSCCAG00000028906	-	96	73.362	ENSGALG00000037087	RPF2	91	70.922	Gallus_gallus
ENSCCAG00000028906	-	96	63.478	ENSGAFG00000009537	rpf2	95	59.655	Gambusia_affinis
ENSCCAG00000028906	-	98	65.236	ENSGACG00000006507	rpf2	85	65.019	Gasterosteus_aculeatus
ENSCCAG00000028906	-	96	72.197	ENSGAGG00000016221	RPF2	85	72.374	Gopherus_agassizii
ENSCCAG00000028906	-	95	64.706	ENSGGOG00000001469	RPF2	94	64.706	Gorilla_gorilla
ENSCCAG00000028906	-	96	79.825	ENSGGOG00000024187	-	92	79.070	Gorilla_gorilla
ENSCCAG00000028906	-	96	64.035	ENSHBUG00000021805	rpf2	85	64.259	Haplochromis_burtoni
ENSCCAG00000028906	-	96	74.236	ENSHGLG00000012697	-	91	74.144	Heterocephalus_glaber_female
ENSCCAG00000028906	-	96	79.476	ENSHGLG00000001322	RPF2	95	75.862	Heterocephalus_glaber_female
ENSCCAG00000028906	-	96	71.616	ENSHGLG00000012500	-	78	67.905	Heterocephalus_glaber_female
ENSCCAG00000028906	-	96	79.476	ENSHGLG00100012131	RPF2	95	75.862	Heterocephalus_glaber_male
ENSCCAG00000028906	-	96	71.179	ENSHGLG00100012473	-	95	67.568	Heterocephalus_glaber_male
ENSCCAG00000028906	-	96	67.431	ENSHGLG00100002981	-	91	68.526	Heterocephalus_glaber_male
ENSCCAG00000028906	-	88	71.905	ENSHGLG00100009310	-	99	68.504	Heterocephalus_glaber_male
ENSCCAG00000028906	-	96	74.236	ENSHGLG00100000462	-	91	74.144	Heterocephalus_glaber_male
ENSCCAG00000028906	-	96	64.474	ENSHCOG00000000225	rpf2	86	64.259	Hippocampus_comes
ENSCCAG00000028906	-	97	54.741	ENSIPUG00000016288	rpf2	85	54.962	Ictalurus_punctatus
ENSCCAG00000028906	-	96	57.143	ENSSTOG00000013114	RPF2	94	58.562	Ictidomys_tridecemlineatus
ENSCCAG00000028906	-	96	75.688	ENSJJAG00000009092	Rpf2	92	75.794	Jaculus_jaculus
ENSCCAG00000028906	-	96	64.474	ENSKMAG00000014609	rpf2	86	65.399	Kryptolebias_marmoratus
ENSCCAG00000028906	-	98	65.236	ENSLBEG00000011907	rpf2	84	61.111	Labrus_bergylta
ENSCCAG00000028906	-	96	66.087	ENSLACG00000003942	RPF2	90	64.894	Latimeria_chalumnae
ENSCCAG00000028906	-	97	65.532	ENSLOCG00000016992	rpf2	86	65.789	Lepisosteus_oculatus
ENSCCAG00000028906	-	96	81.223	ENSLAFG00000018219	RPF2	95	76.632	Loxodonta_africana
ENSCCAG00000028906	-	95	67.544	ENSMFAG00000036119	-	94	68.110	Macaca_fascicularis
ENSCCAG00000028906	-	96	83.406	ENSMFAG00000000417	RPF2	98	80.864	Macaca_fascicularis
ENSCCAG00000028906	-	96	83.406	ENSMMUG00000021532	RPF2	100	83.645	Macaca_mulatta
ENSCCAG00000028906	-	95	67.105	ENSMMUG00000042376	-	95	65.493	Macaca_mulatta
ENSCCAG00000028906	-	95	64.706	ENSMNEG00000031683	RPF2	94	64.706	Macaca_nemestrina
ENSCCAG00000028906	-	95	68.722	ENSMLEG00000042472	-	95	66.078	Mandrillus_leucophaeus
ENSCCAG00000028906	-	96	62.281	ENSMAMG00000004267	rpf2	85	62.738	Mastacembelus_armatus
ENSCCAG00000028906	-	96	64.035	ENSMZEG00005015632	rpf2	85	64.259	Maylandia_zebra
ENSCCAG00000028906	-	96	73.362	ENSMGAG00000013429	RPF2	91	70.922	Meleagris_gallopavo
ENSCCAG00000028906	-	98	58.108	ENSMAUG00000005049	Rpf2	97	58.120	Mesocricetus_auratus
ENSCCAG00000028906	-	96	80.786	ENSMICG00000032086	-	98	77.778	Microcebus_murinus
ENSCCAG00000028906	-	98	62.128	ENSMICG00000028979	-	95	60.690	Microcebus_murinus
ENSCCAG00000028906	-	96	73.362	ENSMICG00000038169	-	95	71.831	Microcebus_murinus
ENSCCAG00000028906	-	98	81.974	ENSMOCG00000005634	Rpf2	94	75.862	Microtus_ochrogaster
ENSCCAG00000028906	-	97	56.466	ENSMMOG00000014844	rpf2	86	57.414	Mola_mola
ENSCCAG00000028906	-	96	78.166	ENSMODG00000017919	RPF2	95	72.759	Monodelphis_domestica
ENSCCAG00000028906	-	98	62.661	ENSMALG00000019046	rpf2	85	63.118	Monopterus_albus
ENSCCAG00000028906	-	98	81.116	MGP_CAROLIEiJ_G0015254	Rpf2	95	75.517	Mus_caroli
ENSCCAG00000028906	-	98	80.258	ENSMUSG00000038510	Rpf2	99	74.444	Mus_musculus
ENSCCAG00000028906	-	98	80.687	MGP_PahariEiJ_G0030671	Rpf2	99	74.815	Mus_pahari
ENSCCAG00000028906	-	98	80.687	MGP_SPRETEiJ_G0016063	Rpf2	98	74.815	Mus_spretus
ENSCCAG00000028906	-	96	82.533	ENSMPUG00000010183	RPF2	83	78.082	Mustela_putorius_furo
ENSCCAG00000028906	-	83	87.766	ENSMLUG00000005676	RPF2	98	82.470	Myotis_lucifugus
ENSCCAG00000028906	-	98	81.974	ENSNGAG00000009701	Rpf2	95	76.552	Nannospalax_galili
ENSCCAG00000028906	-	96	63.158	ENSNBRG00000011087	rpf2	85	63.498	Neolamprologus_brichardi
ENSCCAG00000028906	-	96	82.969	ENSNLEG00000027819	RPF2	95	78.966	Nomascus_leucogenys
ENSCCAG00000028906	-	98	81.116	ENSNLEG00000011848	-	97	80.769	Nomascus_leucogenys
ENSCCAG00000028906	-	96	80.702	ENSNLEG00000033597	-	93	74.737	Nomascus_leucogenys
ENSCCAG00000028906	-	96	56.140	ENSMEUG00000006421	RPF2	98	55.172	Notamacropus_eugenii
ENSCCAG00000028906	-	96	69.725	ENSODEG00000003531	-	98	68.582	Octodon_degus
ENSCCAG00000028906	-	96	73.853	ENSODEG00000006584	-	94	70.609	Octodon_degus
ENSCCAG00000028906	-	96	81.659	ENSODEG00000013529	-	95	76.897	Octodon_degus
ENSCCAG00000028906	-	96	68.860	ENSODEG00000002442	-	94	69.455	Octodon_degus
ENSCCAG00000028906	-	96	72.018	ENSODEG00000006939	-	98	71.756	Octodon_degus
ENSCCAG00000028906	-	96	77.729	ENSODEG00000019144	-	95	73.793	Octodon_degus
ENSCCAG00000028906	-	96	63.596	ENSONIG00000011383	rpf2	95	59.247	Oreochromis_niloticus
ENSCCAG00000028906	-	96	81.659	ENSOCUG00000016028	RPF2	95	77.241	Oryctolagus_cuniculus
ENSCCAG00000028906	-	97	62.771	ENSORLG00000015183	rpf2	85	63.878	Oryzias_latipes
ENSCCAG00000028906	-	97	62.338	ENSORLG00020008756	rpf2	85	62.646	Oryzias_latipes_hni
ENSCCAG00000028906	-	97	62.771	ENSORLG00015003841	RPF2	85	63.878	Oryzias_latipes_hsok
ENSCCAG00000028906	-	96	64.474	ENSOMEG00000011508	rpf2	85	65.019	Oryzias_melastigma
ENSCCAG00000028906	-	96	81.659	ENSOGAG00000007438	RPF2	95	77.586	Otolemur_garnettii
ENSCCAG00000028906	-	96	82.533	ENSOARG00000015548	-	95	77.586	Ovis_aries
ENSCCAG00000028906	-	96	82.533	ENSOARG00000009886	-	95	77.586	Ovis_aries
ENSCCAG00000028906	-	96	80.702	ENSPPAG00000032089	-	95	79.562	Pan_paniscus
ENSCCAG00000028906	-	96	83.843	ENSPPAG00000035622	RPF2	95	79.655	Pan_paniscus
ENSCCAG00000028906	-	97	67.965	ENSPPRG00000008363	-	95	66.782	Panthera_pardus
ENSCCAG00000028906	-	96	81.659	ENSPPRG00000000320	-	95	77.931	Panthera_pardus
ENSCCAG00000028906	-	96	81.659	ENSPTIG00000002060	RPF2	95	77.931	Panthera_tigris_altaica
ENSCCAG00000028906	-	96	83.843	ENSPTRG00000018503	RPF2	95	79.655	Pan_troglodytes
ENSCCAG00000028906	-	96	83.406	ENSPANG00000018834	RPF2	95	79.310	Papio_anubis
ENSCCAG00000028906	-	98	67.811	ENSPKIG00000019506	rpf2	86	66.540	Paramormyrops_kingsleyae
ENSCCAG00000028906	-	96	74.672	ENSPSIG00000014887	RPF2	89	72.894	Pelodiscus_sinensis
ENSCCAG00000028906	-	98	75.225	ENSPEMG00000011413	Rpf2	92	74.206	Peromyscus_maniculatus_bairdii
ENSCCAG00000028906	-	96	78.166	ENSPCIG00000028172	RPF2	89	74.377	Phascolarctos_cinereus
ENSCCAG00000028906	-	96	64.348	ENSPFOG00000003396	rpf2	95	60.345	Poecilia_formosa
ENSCCAG00000028906	-	96	63.913	ENSPLAG00000001226	rpf2	95	60.000	Poecilia_latipinna
ENSCCAG00000028906	-	96	64.348	ENSPMEG00000007781	rpf2	95	60.345	Poecilia_mexicana
ENSCCAG00000028906	-	96	63.596	ENSPREG00000020525	rpf2	95	59.310	Poecilia_reticulata
ENSCCAG00000028906	-	96	83.843	ENSPPYG00000016925	RPF2	95	79.310	Pongo_abelii
ENSCCAG00000028906	-	85	82.812	ENSPCAG00000002562	RPF2	79	83.077	Procavia_capensis
ENSCCAG00000028906	-	96	66.518	ENSPCOG00000012785	RPF2	94	65.965	Propithecus_coquereli
ENSCCAG00000028906	-	83	87.234	ENSPVAG00000003446	RPF2	83	82.283	Pteropus_vampyrus
ENSCCAG00000028906	-	97	62.338	ENSPNAG00000000082	rpf2	86	62.738	Pygocentrus_nattereri
ENSCCAG00000028906	-	98	80.687	ENSRNOG00000000587	Rpf2	95	75.172	Rattus_norvegicus
ENSCCAG00000028906	-	96	80.786	ENSRBIG00000038389	RPF2	98	79.630	Rhinopithecus_bieti
ENSCCAG00000028906	-	96	76.190	ENSRROG00000039510	-	94	76.172	Rhinopithecus_roxellana
ENSCCAG00000028906	-	96	82.533	ENSRROG00000036457	RPF2	94	78.125	Rhinopithecus_roxellana
ENSCCAG00000028906	-	84	84.896	ENSRROG00000028992	-	84	75.319	Rhinopithecus_roxellana
ENSCCAG00000028906	-	98	78.970	ENSRROG00000036685	-	90	78.390	Rhinopithecus_roxellana
ENSCCAG00000028906	-	98	37.966	YKR081C	-	86	37.966	Saccharomyces_cerevisiae
ENSCCAG00000028906	-	98	62.338	ENSSBOG00000029182	-	89	61.373	Saimiri_boliviensis_boliviensis
ENSCCAG00000028906	-	87	71.981	ENSSBOG00000022486	-	95	69.455	Saimiri_boliviensis_boliviensis
ENSCCAG00000028906	-	97	68.778	ENSSBOG00000034420	-	94	68.889	Saimiri_boliviensis_boliviensis
ENSCCAG00000028906	-	98	80.631	ENSSBOG00000025434	-	97	80.000	Saimiri_boliviensis_boliviensis
ENSCCAG00000028906	-	98	61.373	ENSSBOG00000030264	-	88	60.581	Saimiri_boliviensis_boliviensis
ENSCCAG00000028906	-	96	77.729	ENSSHAG00000002212	RPF2	94	72.069	Sarcophilus_harrisii
ENSCCAG00000028906	-	96	63.964	ENSSFOG00015020916	rpf2	86	64.202	Scleropages_formosus
ENSCCAG00000028906	-	96	62.609	ENSSMAG00000017499	rpf2	85	63.498	Scophthalmus_maximus
ENSCCAG00000028906	-	97	62.832	ENSSDUG00000010383	rpf2	83	63.813	Seriola_dumerili
ENSCCAG00000028906	-	97	64.224	ENSSLDG00000022111	rpf2	85	65.019	Seriola_lalandi_dorsalis
ENSCCAG00000028906	-	96	51.528	ENSSARG00000012063	RPF2	95	53.793	Sorex_araneus
ENSCCAG00000028906	-	96	72.197	ENSSPUG00000005108	RPF2	90	69.818	Sphenodon_punctatus
ENSCCAG00000028906	-	97	63.636	ENSSPAG00000008035	rpf2	85	64.259	Stegastes_partitus
ENSCCAG00000028906	-	96	81.659	ENSSSCG00000004394	RPF2	95	77.931	Sus_scrofa
ENSCCAG00000028906	-	96	75.109	ENSTGUG00000012034	RPF2	91	71.631	Taeniopygia_guttata
ENSCCAG00000028906	-	96	64.348	ENSTRUG00000018264	rpf2	85	64.639	Takifugu_rubripes
ENSCCAG00000028906	-	97	58.190	ENSTNIG00000002749	rpf2	85	59.316	Tetraodon_nigroviridis
ENSCCAG00000028906	-	83	79.255	ENSTBEG00000017151	RPF2	82	75.299	Tupaia_belangeri
ENSCCAG00000028906	-	96	82.533	ENSTTRG00000012357	RPF2	95	77.931	Tursiops_truncatus
ENSCCAG00000028906	-	96	82.533	ENSUAMG00000013497	RPF2	95	78.621	Ursus_americanus
ENSCCAG00000028906	-	96	82.533	ENSUMAG00000025488	RPF2	95	78.276	Ursus_maritimus
ENSCCAG00000028906	-	96	81.659	ENSVPAG00000009562	RPF2	95	77.241	Vicugna_pacos
ENSCCAG00000028906	-	91	76.098	ENSVVUG00000021231	-	98	73.507	Vulpes_vulpes
ENSCCAG00000028906	-	96	76.606	ENSVVUG00000006593	-	95	73.310	Vulpes_vulpes
ENSCCAG00000028906	-	97	68.534	ENSXETG00000021335	rpf2	85	68.821	Xenopus_tropicalis
ENSCCAG00000028906	-	96	61.333	ENSXCOG00000001590	rpf2	86	62.403	Xiphophorus_couchianus
ENSCCAG00000028906	-	96	58.447	ENSXMAG00000021706	rpf2	95	55.914	Xiphophorus_maculatus