EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000028990 (Gene tree)
Gene ID: 108305615
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 20636 bases
Position: chrKV389490.1:7113900-7134535
Accession: 108305615
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000022436	PRP4	PF08799.11	6.7e-14	1	1
ENSCCAP00000022476	PRP4	PF08799.11	7.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000039934	PRPF4-201	6068	XM_017530351	ENSCCAP00000022436	521 (aa)	XP_017385840	A0A2K5R2S0
ENSCCAT00000039956	PRPF4-202	762	XM_017530353	ENSCCAP00000022458	253 (aa)	XP_017385842	A0A2K5R2T8
ENSCCAT00000039974	PRPF4-203	1626	-	ENSCCAP00000022476	541 (aa)	-	A0A2K5R2W4

Gene Model

Click here to download ENSCCAG00000028990's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000028990's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000028990	PRPF4	56	30.000	ENSCCAG00000023380	POC1A	82	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000028990	PRPF4	100	99.424	ENSG00000136875	PRPF4	100	99.424	Homo_sapiens
ENSCCAG00000028990	PRPF4	96	77.197	ENSAPOG00000014132	prpf4	98	77.197	Acanthochromis_polyacanthus
ENSCCAG00000028990	PRPF4	100	99.616	ENSAMEG00000013048	PRPF4	100	97.770	Ailuropoda_melanoleuca
ENSCCAG00000028990	PRPF4	96	77.381	ENSACIG00000005579	prpf4	99	77.381	Amphilophus_citrinellus
ENSCCAG00000028990	PRPF4	96	76.634	ENSAOCG00000005457	prpf4	99	76.634	Amphiprion_ocellaris
ENSCCAG00000028990	PRPF4	96	76.436	ENSAPEG00000000776	prpf4	99	76.436	Amphiprion_percula
ENSCCAG00000028990	PRPF4	96	76.389	ENSATEG00000023013	prpf4	99	76.389	Anabas_testudineus
ENSCCAG00000028990	PRPF4	100	89.251	ENSAPLG00000006534	PRPF4	99	87.992	Anas_platyrhynchos
ENSCCAG00000028990	PRPF4	100	90.249	ENSACAG00000015110	PRPF4	100	90.249	Anolis_carolinensis
ENSCCAG00000028990	PRPF4	100	99.808	ENSANAG00000022464	PRPF4	100	98.155	Aotus_nancymaae
ENSCCAG00000028990	PRPF4	96	76.786	ENSACLG00000019031	prpf4	99	76.786	Astatotilapia_calliptera
ENSCCAG00000028990	PRPF4	97	62.572	ENSAMXG00000006756	prpf4	99	73.663	Astyanax_mexicanus
ENSCCAG00000028990	PRPF4	100	98.848	ENSBTAG00000004571	PRPF4	100	98.848	Bos_taurus
ENSCCAG00000028990	PRPF4	90	44.000	WBGene00007972	prp-4	96	44.000	Caenorhabditis_elegans
ENSCCAG00000028990	PRPF4	100	99.617	ENSCJAG00000017856	PRPF4	100	99.617	Callithrix_jacchus
ENSCCAG00000028990	PRPF4	100	99.616	ENSCAFG00000003224	PRPF4	99	98.493	Canis_familiaris
ENSCCAG00000028990	PRPF4	100	99.616	ENSCAFG00020022637	PRPF4	100	99.616	Canis_lupus_dingo
ENSCCAG00000028990	PRPF4	100	99.042	ENSCHIG00000024648	-	100	99.042	Capra_hircus
ENSCCAG00000028990	PRPF4	100	99.424	ENSTSYG00000010366	PRPF4	100	99.424	Carlito_syrichta
ENSCCAG00000028990	PRPF4	88	88.783	ENSCAPG00000008935	PRPF4	97	88.783	Cavia_aperea
ENSCCAG00000028990	PRPF4	100	92.514	ENSCPOG00000014729	-	100	92.514	Cavia_porcellus
ENSCCAG00000028990	PRPF4	100	99.040	ENSCPOG00000010747	-	100	99.040	Cavia_porcellus
ENSCCAG00000028990	PRPF4	100	99.424	ENSCATG00000021552	PRPF4	100	99.424	Cercocebus_atys
ENSCCAG00000028990	PRPF4	100	99.232	ENSCLAG00000013448	PRPF4	100	99.232	Chinchilla_lanigera
ENSCCAG00000028990	PRPF4	87	95.575	ENSCHOG00000007233	PRPF4	100	95.575	Choloepus_hoffmanni
ENSCCAG00000028990	PRPF4	99	91.650	ENSCPBG00000019136	PRPF4	74	91.650	Chrysemys_picta_bellii
ENSCCAG00000028990	PRPF4	96	59.055	ENSCING00000001299	-	97	58.416	Ciona_intestinalis
ENSCCAG00000028990	PRPF4	96	57.540	ENSCSAVG00000009178	-	99	58.874	Ciona_savignyi
ENSCCAG00000028990	PRPF4	100	99.616	ENSCANG00000003246	PRPF4	100	99.616	Colobus_angolensis_palliatus
ENSCCAG00000028990	PRPF4	100	99.424	ENSCGRG00001016992	Prpf4	100	99.424	Cricetulus_griseus_chok1gshd
ENSCCAG00000028990	PRPF4	100	99.424	ENSCGRG00000017560	Prpf4	100	99.424	Cricetulus_griseus_crigri
ENSCCAG00000028990	PRPF4	97	75.644	ENSCSEG00000020451	prpf4	99	75.644	Cynoglossus_semilaevis
ENSCCAG00000028990	PRPF4	97	80.000	ENSDARG00000067639	prpf4	99	80.000	Danio_rerio
ENSCCAG00000028990	PRPF4	100	99.042	ENSDNOG00000013203	PRPF4	100	99.042	Dasypus_novemcinctus
ENSCCAG00000028990	PRPF4	100	99.424	ENSDORG00000026275	Prpf4	100	99.424	Dipodomys_ordii
ENSCCAG00000028990	PRPF4	87	56.893	FBgn0036733	U4-U6-60K	99	50.730	Drosophila_melanogaster
ENSCCAG00000028990	PRPF4	100	97.323	ENSETEG00000020389	PRPF4	100	97.323	Echinops_telfairi
ENSCCAG00000028990	PRPF4	95	73.272	ENSEBUG00000015229	prpf4	86	73.733	Eptatretus_burgeri
ENSCCAG00000028990	PRPF4	100	99.808	ENSEASG00005022678	PRPF4	100	99.808	Equus_asinus_asinus
ENSCCAG00000028990	PRPF4	100	99.808	ENSECAG00000007072	PRPF4	100	99.808	Equus_caballus
ENSCCAG00000028990	PRPF4	100	78.603	ENSEEUG00000007480	PRPF4	100	78.603	Erinaceus_europaeus
ENSCCAG00000028990	PRPF4	97	80.594	ENSELUG00000007510	prpf4	99	80.594	Esox_lucius
ENSCCAG00000028990	PRPF4	100	99.617	ENSFCAG00000005514	PRPF4	100	99.617	Felis_catus
ENSCCAG00000028990	PRPF4	98	88.565	ENSFALG00000005423	PRPF4	90	85.806	Ficedula_albicollis
ENSCCAG00000028990	PRPF4	100	99.040	ENSFDAG00000005839	PRPF4	100	99.040	Fukomys_damarensis
ENSCCAG00000028990	PRPF4	96	75.992	ENSFHEG00000001300	prpf4	99	75.992	Fundulus_heteroclitus
ENSCCAG00000028990	PRPF4	98	90.411	ENSGALG00000008857	PRPF4	100	87.013	Gallus_gallus
ENSCCAG00000028990	PRPF4	65	70.882	ENSGAFG00000012164	prpf4	70	70.882	Gambusia_affinis
ENSCCAG00000028990	PRPF4	96	69.444	ENSGACG00000015476	prpf4	99	68.651	Gasterosteus_aculeatus
ENSCCAG00000028990	PRPF4	99	91.456	ENSGAGG00000025029	PRPF4	97	90.286	Gopherus_agassizii
ENSCCAG00000028990	PRPF4	100	99.424	ENSGGOG00000006943	PRPF4	100	99.424	Gorilla_gorilla
ENSCCAG00000028990	PRPF4	96	76.587	ENSHBUG00000000562	prpf4	99	76.587	Haplochromis_burtoni
ENSCCAG00000028990	PRPF4	100	81.836	ENSHGLG00000016628	-	100	82.600	Heterocephalus_glaber_female
ENSCCAG00000028990	PRPF4	100	80.614	ENSHGLG00000003838	-	100	80.614	Heterocephalus_glaber_female
ENSCCAG00000028990	PRPF4	100	99.040	ENSHGLG00000015191	PRPF4	100	99.040	Heterocephalus_glaber_female
ENSCCAG00000028990	PRPF4	100	80.614	ENSHGLG00100005571	-	100	80.614	Heterocephalus_glaber_male
ENSCCAG00000028990	PRPF4	97	79.010	ENSIPUG00000017956	PRPF4	99	79.010	Ictalurus_punctatus
ENSCCAG00000028990	PRPF4	100	99.232	ENSSTOG00000027833	PRPF4	100	99.232	Ictidomys_tridecemlineatus
ENSCCAG00000028990	PRPF4	100	99.424	ENSJJAG00000008838	Prpf4	100	99.424	Jaculus_jaculus
ENSCCAG00000028990	PRPF4	96	75.992	ENSKMAG00000013236	prpf4	99	75.992	Kryptolebias_marmoratus
ENSCCAG00000028990	PRPF4	96	75.697	ENSLBEG00000020611	prpf4	99	75.697	Labrus_bergylta
ENSCCAG00000028990	PRPF4	99	80.347	ENSLACG00000016317	PRPF4	99	80.347	Latimeria_chalumnae
ENSCCAG00000028990	PRPF4	97	81.584	ENSLOCG00000000581	prpf4	99	81.584	Lepisosteus_oculatus
ENSCCAG00000028990	PRPF4	100	98.851	ENSLAFG00000018225	PRPF4	100	98.851	Loxodonta_africana
ENSCCAG00000028990	PRPF4	100	99.232	ENSMFAG00000039397	PRPF4	100	99.232	Macaca_fascicularis
ENSCCAG00000028990	PRPF4	100	99.424	ENSMMUG00000005844	PRPF4	100	99.424	Macaca_mulatta
ENSCCAG00000028990	PRPF4	100	88.868	ENSMNEG00000033737	PRPF4	100	88.868	Macaca_nemestrina
ENSCCAG00000028990	PRPF4	100	99.424	ENSMLEG00000040284	PRPF4	100	99.424	Mandrillus_leucophaeus
ENSCCAG00000028990	PRPF4	97	75.937	ENSMAMG00000020141	prpf4	99	75.937	Mastacembelus_armatus
ENSCCAG00000028990	PRPF4	96	76.786	ENSMZEG00005023205	prpf4	99	76.786	Maylandia_zebra
ENSCCAG00000028990	PRPF4	99	88.654	ENSMGAG00000001796	PRPF4	98	88.381	Meleagris_gallopavo
ENSCCAG00000028990	PRPF4	100	98.848	ENSMAUG00000018022	Prpf4	100	98.848	Mesocricetus_auratus
ENSCCAG00000028990	PRPF4	100	98.656	ENSMICG00000015022	PRPF4	100	98.467	Microcebus_murinus
ENSCCAG00000028990	PRPF4	100	98.848	ENSMOCG00000018273	Prpf4	100	98.848	Microtus_ochrogaster
ENSCCAG00000028990	PRPF4	97	74.653	ENSMMOG00000021177	prpf4	99	74.653	Mola_mola
ENSCCAG00000028990	PRPF4	100	95.411	ENSMODG00000025096	-	97	95.411	Monodelphis_domestica
ENSCCAG00000028990	PRPF4	100	95.220	ENSMODG00000004444	-	100	95.220	Monodelphis_domestica
ENSCCAG00000028990	PRPF4	96	76.389	ENSMALG00000013624	prpf4	99	76.389	Monopterus_albus
ENSCCAG00000028990	PRPF4	100	99.232	MGP_CAROLIEiJ_G0026078	Prpf4	100	99.232	Mus_caroli
ENSCCAG00000028990	PRPF4	100	99.232	ENSMUSG00000066148	Prpf4	100	99.232	Mus_musculus
ENSCCAG00000028990	PRPF4	100	99.040	MGP_PahariEiJ_G0028413	Prpf4	100	99.040	Mus_pahari
ENSCCAG00000028990	PRPF4	100	99.232	MGP_SPRETEiJ_G0027042	Prpf4	100	99.232	Mus_spretus
ENSCCAG00000028990	PRPF4	100	99.616	ENSMPUG00000007883	PRPF4	100	99.616	Mustela_putorius_furo
ENSCCAG00000028990	PRPF4	100	97.313	ENSMLUG00000008626	-	99	96.408	Myotis_lucifugus
ENSCCAG00000028990	PRPF4	100	99.232	ENSMLUG00000015309	-	99	98.488	Myotis_lucifugus
ENSCCAG00000028990	PRPF4	100	94.050	ENSNGAG00000000468	Prpf4	100	94.050	Nannospalax_galili
ENSCCAG00000028990	PRPF4	96	76.984	ENSNBRG00000007972	prpf4	99	76.984	Neolamprologus_brichardi
ENSCCAG00000028990	PRPF4	100	99.808	ENSNLEG00000016647	PRPF4	100	99.808	Nomascus_leucogenys
ENSCCAG00000028990	PRPF4	99	95.331	ENSMEUG00000013256	PRPF4	100	95.331	Notamacropus_eugenii
ENSCCAG00000028990	PRPF4	100	98.851	ENSOPRG00000005302	PRPF4	100	98.851	Ochotona_princeps
ENSCCAG00000028990	PRPF4	100	99.424	ENSODEG00000018147	PRPF4	100	99.424	Octodon_degus
ENSCCAG00000028990	PRPF4	99	75.096	ENSONIG00000012671	prpf4	99	76.786	Oreochromis_niloticus
ENSCCAG00000028990	PRPF4	100	99.616	ENSOCUG00000005046	PRPF4	100	99.616	Oryctolagus_cuniculus
ENSCCAG00000028990	PRPF4	96	74.701	ENSORLG00000019641	prpf4	99	74.701	Oryzias_latipes
ENSCCAG00000028990	PRPF4	96	74.701	ENSORLG00020019438	prpf4	99	74.701	Oryzias_latipes_hni
ENSCCAG00000028990	PRPF4	96	74.526	ENSOMEG00000020941	prpf4	99	74.526	Oryzias_melastigma
ENSCCAG00000028990	PRPF4	100	94.434	ENSOGAG00000007802	PRPF4	98	94.434	Otolemur_garnettii
ENSCCAG00000028990	PRPF4	100	99.232	ENSOARG00000006319	PRPF4	100	98.336	Ovis_aries
ENSCCAG00000028990	PRPF4	100	99.424	ENSPPAG00000041797	PRPF4	100	99.424	Pan_paniscus
ENSCCAG00000028990	PRPF4	100	99.808	ENSPPRG00000014360	PRPF4	100	99.808	Panthera_pardus
ENSCCAG00000028990	PRPF4	100	99.808	ENSPTIG00000009574	PRPF4	100	99.808	Panthera_tigris_altaica
ENSCCAG00000028990	PRPF4	100	99.424	ENSPTRG00000021274	PRPF4	100	99.234	Pan_troglodytes
ENSCCAG00000028990	PRPF4	100	99.232	ENSPANG00000025776	PRPF4	100	97.790	Papio_anubis
ENSCCAG00000028990	PRPF4	97	81.386	ENSPKIG00000017259	prpf4	99	81.386	Paramormyrops_kingsleyae
ENSCCAG00000028990	PRPF4	100	90.019	ENSPSIG00000010713	PRPF4	95	87.963	Pelodiscus_sinensis
ENSCCAG00000028990	PRPF4	99	58.608	ENSPMGG00000000997	prpf4	99	58.716	Periophthalmus_magnuspinnatus
ENSCCAG00000028990	PRPF4	100	99.424	ENSPEMG00000024115	Prpf4	100	99.424	Peromyscus_maniculatus_bairdii
ENSCCAG00000028990	PRPF4	99	95.331	ENSPCIG00000003821	PRPF4	99	95.331	Phascolarctos_cinereus
ENSCCAG00000028990	PRPF4	96	69.822	ENSPFOG00000013524	prpf4	98	72.671	Poecilia_formosa
ENSCCAG00000028990	PRPF4	83	71.254	ENSPLAG00000011620	prpf4	96	71.739	Poecilia_latipinna
ENSCCAG00000028990	PRPF4	92	73.795	ENSPMEG00000006813	prpf4	98	73.795	Poecilia_mexicana
ENSCCAG00000028990	PRPF4	98	99.220	ENSPCAG00000002561	PRPF4	99	99.220	Procavia_capensis
ENSCCAG00000028990	PRPF4	100	99.232	ENSPCOG00000011975	PRPF4	100	99.232	Propithecus_coquereli
ENSCCAG00000028990	PRPF4	100	95.785	ENSPVAG00000004708	PRPF4	100	95.785	Pteropus_vampyrus
ENSCCAG00000028990	PRPF4	96	76.786	ENSPNYG00000008013	prpf4	99	76.786	Pundamilia_nyererei
ENSCCAG00000028990	PRPF4	97	80.594	ENSPNAG00000000697	prpf4	99	80.594	Pygocentrus_nattereri
ENSCCAG00000028990	PRPF4	100	99.040	ENSRNOG00000014777	Prpf4	100	99.040	Rattus_norvegicus
ENSCCAG00000028990	PRPF4	100	99.616	ENSRBIG00000040221	PRPF4	100	99.616	Rhinopithecus_bieti
ENSCCAG00000028990	PRPF4	100	99.616	ENSRROG00000040240	PRPF4	100	99.616	Rhinopithecus_roxellana
ENSCCAG00000028990	PRPF4	100	95.793	ENSSHAG00000017658	PRPF4	100	95.793	Sarcophilus_harrisii
ENSCCAG00000028990	PRPF4	97	82.178	ENSSFOG00015008963	prpf4	99	82.178	Scleropages_formosus
ENSCCAG00000028990	PRPF4	96	75.397	ENSSMAG00000008889	prpf4	99	75.397	Scophthalmus_maximus
ENSCCAG00000028990	PRPF4	96	73.307	ENSSDUG00000022083	prpf4	98	73.506	Seriola_dumerili
ENSCCAG00000028990	PRPF4	96	73.506	ENSSLDG00000008115	prpf4	98	73.705	Seriola_lalandi_dorsalis
ENSCCAG00000028990	PRPF4	100	90.787	ENSSPUG00000015582	PRPF4	100	90.787	Sphenodon_punctatus
ENSCCAG00000028990	PRPF4	96	71.006	ENSSPAG00000011286	prpf4	99	71.006	Stegastes_partitus
ENSCCAG00000028990	PRPF4	100	99.808	ENSSSCG00000024648	PRPF4	100	99.808	Sus_scrofa
ENSCCAG00000028990	PRPF4	95	90.669	ENSTGUG00000002623	PRPF4	100	91.002	Taeniopygia_guttata
ENSCCAG00000028990	PRPF4	97	75.296	ENSTRUG00000008853	prpf4	99	75.296	Takifugu_rubripes
ENSCCAG00000028990	PRPF4	97	74.653	ENSTNIG00000013250	prpf4	99	74.653	Tetraodon_nigroviridis
ENSCCAG00000028990	PRPF4	100	90.805	ENSTBEG00000000821	PRPF4	100	90.805	Tupaia_belangeri
ENSCCAG00000028990	PRPF4	82	98.993	ENSTTRG00000003246	PRPF4	85	98.993	Tursiops_truncatus
ENSCCAG00000028990	PRPF4	64	96.407	ENSUAMG00000018288	PRPF4	90	96.407	Ursus_americanus
ENSCCAG00000028990	PRPF4	100	98.848	ENSUMAG00000019375	PRPF4	100	98.848	Ursus_maritimus
ENSCCAG00000028990	PRPF4	100	99.042	ENSVPAG00000005281	PRPF4	100	99.042	Vicugna_pacos
ENSCCAG00000028990	PRPF4	100	98.476	ENSVVUG00000002476	PRPF4	100	98.476	Vulpes_vulpes
ENSCCAG00000028990	PRPF4	69	57.778	ENSXCOG00000006101	prpf4	93	59.113	Xiphophorus_couchianus
ENSCCAG00000028990	PRPF4	88	64.192	ENSXMAG00000002750	prpf4	98	65.209	Xiphophorus_maculatus