EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000029099 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: eukaryotic translation initiation factor 3 subunit C pseudogene
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 4161 bases
Position: chrKV389764.1:2133376-2137536
Accession: 108287203
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000022683	eIF-3c_N	PF05470.12	5.1e-210	1	1
ENSCCAP00000022669	eIF-3c_N	PF05470.12	5.1e-210	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000040167	-	2565	-	ENSCCAP00000022669	854 (aa)	-	A0A2K5R3G1
ENSCCAT00000040181	-	2574	-	ENSCCAP00000022683	857 (aa)	-	A0A2K5R3G8

Gene Model

Click here to download ENSCCAG00000029099's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000029099's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000029099	-	99	82.483	ENSCCAG00000034928	-	99	83.778
ENSCCAG00000029099	-	99	79.978	ENSCCAG00000027724	-	99	80.816

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000029099	-	99	83.187	ENSG00000184110	EIF3C	100	88.608	Homo_sapiens
ENSCCAG00000029099	-	99	82.547	ENSG00000205609	EIF3CL	99	84.378	Homo_sapiens
ENSCCAG00000029099	-	98	64.278	ENSAPOG00000024092	eif3c	99	63.883	Acanthochromis_polyacanthus
ENSCCAG00000029099	-	99	82.088	ENSAMEG00000015454	-	99	83.370	Ailuropoda_melanoleuca
ENSCCAG00000029099	-	99	61.742	ENSACIG00000015082	eif3c	99	62.765	Amphilophus_citrinellus
ENSCCAG00000029099	-	98	64.498	ENSAOCG00000021466	eif3c	99	62.598	Amphiprion_ocellaris
ENSCCAG00000029099	-	98	64.498	ENSAPEG00000010521	eif3c	99	62.682	Amphiprion_percula
ENSCCAG00000029099	-	98	64.207	ENSATEG00000019001	eif3c	97	64.474	Anabas_testudineus
ENSCCAG00000029099	-	98	72.536	ENSACAG00000005937	-	99	73.643	Anolis_carolinensis
ENSCCAG00000029099	-	99	83.297	ENSANAG00000020640	-	99	84.581	Aotus_nancymaae
ENSCCAG00000029099	-	80	71.478	ENSACLG00000009322	eif3c	88	71.478	Astatotilapia_calliptera
ENSCCAG00000029099	-	84	71.405	ENSACLG00000009347	eif3c	99	61.564	Astatotilapia_calliptera
ENSCCAG00000029099	-	98	64.972	ENSAMXG00000020949	eif3c	98	64.995	Astyanax_mexicanus
ENSCCAG00000029099	-	99	80.418	ENSBTAG00000006543	EIF3CL	99	82.930	Bos_taurus
ENSCCAG00000029099	-	91	37.470	WBGene00001226	eif-3.C	94	36.723	Caenorhabditis_elegans
ENSCCAG00000029099	-	99	83.187	ENSCJAG00000006341	-	99	84.471	Callithrix_jacchus
ENSCCAG00000029099	-	99	81.978	ENSCAFG00000017143	-	99	83.260	Canis_familiaris
ENSCCAG00000029099	-	99	82.088	ENSCAFG00020017587	-	99	83.370	Canis_lupus_dingo
ENSCCAG00000029099	-	99	80.246	ENSCHIG00000024795	-	99	82.819	Capra_hircus
ENSCCAG00000029099	-	99	81.868	ENSTSYG00000003486	-	99	83.150	Carlito_syrichta
ENSCCAG00000029099	-	95	79.167	ENSCAPG00000015887	-	99	80.359	Cavia_aperea
ENSCCAG00000029099	-	99	81.648	ENSCPOG00000007533	-	99	82.819	Cavia_porcellus
ENSCCAG00000029099	-	98	83.814	ENSCATG00000032673	-	99	84.922	Cercocebus_atys
ENSCCAG00000029099	-	99	81.538	ENSCLAG00000011094	-	99	82.599	Chinchilla_lanigera
ENSCCAG00000029099	-	98	83.814	ENSCSAG00000006297	-	99	84.922	Chlorocebus_sabaeus
ENSCCAG00000029099	-	81	63.745	ENSCPBG00000012407	-	88	77.228	Chrysemys_picta_bellii
ENSCCAG00000029099	-	91	42.996	ENSCSAVG00000006744	-	76	48.542	Ciona_savignyi
ENSCCAG00000029099	-	98	83.814	ENSCANG00000033626	-	99	84.922	Colobus_angolensis_palliatus
ENSCCAG00000029099	-	99	80.528	ENSCGRG00001015265	EIF3C	99	82.029	Cricetulus_griseus_chok1gshd
ENSCCAG00000029099	-	99	62.732	ENSCSEG00000017770	eif3c	99	64.120	Cynoglossus_semilaevis
ENSCCAG00000029099	-	98	63.687	ENSCVAG00000005402	eif3c	97	64.829	Cyprinodon_variegatus
ENSCCAG00000029099	-	98	64.934	ENSDARG00000016443	eif3c	97	65.342	Danio_rerio
ENSCCAG00000029099	-	99	81.978	ENSDNOG00000031497	-	99	83.260	Dasypus_novemcinctus
ENSCCAG00000029099	-	99	81.758	ENSDORG00000016471	Eif3c	99	83.040	Dipodomys_ordii
ENSCCAG00000029099	-	67	50.247	FBgn0034258	eIF3c	95	45.028	Drosophila_melanogaster
ENSCCAG00000029099	-	90	80.937	ENSETEG00000013527	-	91	82.876	Echinops_telfairi
ENSCCAG00000029099	-	94	54.795	ENSEBUG00000001629	eif3c	99	55.763	Eptatretus_burgeri
ENSCCAG00000029099	-	99	81.978	ENSECAG00000008746	-	99	83.150	Equus_caballus
ENSCCAG00000029099	-	86	81.454	ENSEEUG00000006148	-	100	83.208	Erinaceus_europaeus
ENSCCAG00000029099	-	64	56.771	ENSEEUG00000000726	-	67	81.818	Erinaceus_europaeus
ENSCCAG00000029099	-	98	64.088	ENSELUG00000022257	eif3c	93	71.870	Esox_lucius
ENSCCAG00000029099	-	99	82.088	ENSFCAG00000015782	-	99	83.370	Felis_catus
ENSCCAG00000029099	-	99	81.648	ENSFDAG00000003588	-	99	82.599	Fukomys_damarensis
ENSCCAG00000029099	-	98	64.136	ENSFHEG00000014154	EIF3C	97	65.017	Fundulus_heteroclitus
ENSCCAG00000029099	-	71	69.906	ENSGMOG00000016885	eif3c	99	64.574	Gadus_morhua
ENSCCAG00000029099	-	95	64.213	ENSGACG00000007652	eif3c	99	64.576	Gasterosteus_aculeatus
ENSCCAG00000029099	-	92	70.498	ENSGAGG00000006666	-	99	72.156	Gopherus_agassizii
ENSCCAG00000029099	-	96	82.520	ENSGGOG00000026919	EIF3C	99	84.096	Gorilla_gorilla
ENSCCAG00000029099	-	99	81.319	ENSHGLG00000011445	EIF3C	99	82.269	Heterocephalus_glaber_female
ENSCCAG00000029099	-	99	81.319	ENSHGLG00100000217	EIF3C	99	82.269	Heterocephalus_glaber_male
ENSCCAG00000029099	-	98	64.136	ENSHCOG00000019694	eif3c	97	63.987	Hippocampus_comes
ENSCCAG00000029099	-	67	73.710	ENSIPUG00000016878	eif3c	97	65.601	Ictalurus_punctatus
ENSCCAG00000029099	-	99	82.088	ENSSTOG00000021278	-	99	83.260	Ictidomys_tridecemlineatus
ENSCCAG00000029099	-	99	80.549	ENSJJAG00000012722	Eif3c	99	81.828	Jaculus_jaculus
ENSCCAG00000029099	-	98	63.646	ENSKMAG00000021662	eif3c	96	64.530	Kryptolebias_marmoratus
ENSCCAG00000029099	-	98	63.065	ENSLBEG00000023370	eif3c	98	63.656	Labrus_bergylta
ENSCCAG00000029099	-	99	64.941	ENSLACG00000000770	eif3c	99	69.103	Latimeria_chalumnae
ENSCCAG00000029099	-	99	81.319	ENSLAFG00000027426	-	99	82.599	Loxodonta_africana
ENSCCAG00000029099	-	98	83.814	ENSMFAG00000041930	-	99	84.922	Macaca_fascicularis
ENSCCAG00000029099	-	98	83.814	ENSMMUG00000011798	-	99	84.922	Macaca_mulatta
ENSCCAG00000029099	-	98	83.814	ENSMNEG00000023915	-	99	84.922	Macaca_nemestrina
ENSCCAG00000029099	-	98	83.814	ENSMLEG00000027529	-	99	84.922	Mandrillus_leucophaeus
ENSCCAG00000029099	-	98	67.218	ENSMAMG00000012512	eif3c	99	63.337	Mastacembelus_armatus
ENSCCAG00000029099	-	99	61.573	ENSMZEG00005013699	eif3c	99	61.086	Maylandia_zebra
ENSCCAG00000029099	-	80	71.306	ENSMZEG00005013685	eif3c	88	71.306	Maylandia_zebra
ENSCCAG00000029099	-	99	80.308	ENSMAUG00000010621	Eif3c	99	81.808	Mesocricetus_auratus
ENSCCAG00000029099	-	99	82.198	ENSMICG00000036748	-	99	83.480	Microcebus_murinus
ENSCCAG00000029099	-	99	78.831	ENSMOCG00000004204	Eif3c	99	80.331	Microtus_ochrogaster
ENSCCAG00000029099	-	99	62.174	ENSMMOG00000001572	eif3c	99	62.887	Mola_mola
ENSCCAG00000029099	-	99	79.052	ENSMODG00000015579	-	99	78.965	Monodelphis_domestica
ENSCCAG00000029099	-	85	72.250	ENSMALG00000008907	eif3c	99	71.750	Monopterus_albus
ENSCCAG00000029099	-	99	80.947	MGP_CAROLIEiJ_G0030451	Eif3c	99	82.029	Mus_caroli
ENSCCAG00000029099	-	99	80.947	ENSMUSG00000030738	Eif3c	99	82.029	Mus_musculus
ENSCCAG00000029099	-	99	80.066	MGP_PahariEiJ_G0013661	Eif3c	99	81.477	Mus_pahari
ENSCCAG00000029099	-	99	80.947	MGP_SPRETEiJ_G0031565	Eif3c	99	82.029	Mus_spretus
ENSCCAG00000029099	-	95	81.371	ENSMPUG00000012732	-	99	82.514	Mustela_putorius_furo
ENSCCAG00000029099	-	99	81.278	ENSMLUG00000015558	-	99	82.450	Myotis_lucifugus
ENSCCAG00000029099	-	99	81.538	ENSNGAG00000007177	-	99	82.819	Nannospalax_galili
ENSCCAG00000029099	-	89	77.083	ENSNGAG00000010901	-	89	64.103	Nannospalax_galili
ENSCCAG00000029099	-	99	72.464	ENSNLEG00000001425	-	99	72.129	Nomascus_leucogenys
ENSCCAG00000029099	-	89	50.316	ENSMEUG00000005317	-	96	49.431	Notamacropus_eugenii
ENSCCAG00000029099	-	99	65.601	ENSMEUG00000009939	-	99	66.556	Notamacropus_eugenii
ENSCCAG00000029099	-	99	81.099	ENSOPRG00000000931	-	99	82.819	Ochotona_princeps
ENSCCAG00000029099	-	99	81.429	ENSODEG00000013508	-	99	82.637	Octodon_degus
ENSCCAG00000029099	-	66	57.167	ENSONIG00000011434	eif3c	98	56.998	Oreochromis_niloticus
ENSCCAG00000029099	-	99	75.649	ENSOANG00000011410	-	99	77.223	Ornithorhynchus_anatinus
ENSCCAG00000029099	-	99	81.978	ENSOCUG00000022489	-	99	83.260	Oryctolagus_cuniculus
ENSCCAG00000029099	-	98	63.729	ENSORLG00000006318	eif3c	99	62.804	Oryzias_latipes
ENSCCAG00000029099	-	98	63.164	ENSORLG00020015713	eif3c	95	63.907	Oryzias_latipes_hni
ENSCCAG00000029099	-	98	63.274	ENSORLG00015013772	eif3c	96	64.080	Oryzias_latipes_hsok
ENSCCAG00000029099	-	98	63.304	ENSOMEG00000020450	eif3c	97	64.412	Oryzias_melastigma
ENSCCAG00000029099	-	99	81.758	ENSOGAG00000012737	-	99	83.040	Otolemur_garnettii
ENSCCAG00000029099	-	99	80.088	ENSOARG00000002892	-	99	82.819	Ovis_aries
ENSCCAG00000029099	-	99	82.088	ENSPPRG00000012336	-	99	83.370	Panthera_pardus
ENSCCAG00000029099	-	99	82.088	ENSPTIG00000011712	-	99	83.370	Panthera_tigris_altaica
ENSCCAG00000029099	-	98	83.814	ENSPANG00000021151	-	99	84.922	Papio_anubis
ENSCCAG00000029099	-	98	64.254	ENSPKIG00000002049	eif3c	97	65.532	Paramormyrops_kingsleyae
ENSCCAG00000029099	-	84	72.500	ENSPMGG00000005409	eif3c	88	72.500	Periophthalmus_magnuspinnatus
ENSCCAG00000029099	-	99	79.448	ENSPEMG00000010899	Eif3c	99	81.395	Peromyscus_maniculatus_bairdii
ENSCCAG00000029099	-	99	78.791	ENSPCIG00000025206	-	99	78.965	Phascolarctos_cinereus
ENSCCAG00000029099	-	98	63.216	ENSPFOG00000004476	eif3c	97	63.546	Poecilia_formosa
ENSCCAG00000029099	-	98	61.959	ENSPLAG00000017480	eif3c	97	64.320	Poecilia_latipinna
ENSCCAG00000029099	-	98	63.727	ENSPMEG00000019512	eif3c	99	62.247	Poecilia_mexicana
ENSCCAG00000029099	-	99	62.205	ENSPREG00000023139	eif3c	99	62.500	Poecilia_reticulata
ENSCCAG00000029099	-	99	80.000	ENSPPYG00000007227	-	99	81.278	Pongo_abelii
ENSCCAG00000029099	-	66	83.725	ENSPCAG00000012710	-	99	83.725	Procavia_capensis
ENSCCAG00000029099	-	99	82.198	ENSPCOG00000019289	-	99	83.480	Propithecus_coquereli
ENSCCAG00000029099	-	99	81.429	ENSPVAG00000005804	-	99	82.709	Pteropus_vampyrus
ENSCCAG00000029099	-	59	83.654	ENSPNYG00000016530	eif3c	74	83.654	Pundamilia_nyererei
ENSCCAG00000029099	-	98	65.116	ENSPNAG00000024040	eif3c	97	65.632	Pygocentrus_nattereri
ENSCCAG00000029099	-	99	80.286	ENSRNOG00000018761	Eif3c	99	81.698	Rattus_norvegicus
ENSCCAG00000029099	-	99	81.538	ENSRBIG00000044009	-	98	83.726	Rhinopithecus_bieti
ENSCCAG00000029099	-	98	83.814	ENSRROG00000043626	-	99	84.922	Rhinopithecus_roxellana
ENSCCAG00000029099	-	99	82.967	ENSSBOG00000032155	-	99	84.251	Saimiri_boliviensis_boliviensis
ENSCCAG00000029099	-	95	78.563	ENSSHAG00000011808	-	99	78.677	Sarcophilus_harrisii
ENSCCAG00000029099	-	98	64.817	ENSSFOG00015021823	eif3c	97	65.444	Scleropages_formosus
ENSCCAG00000029099	-	98	64.128	ENSSMAG00000016638	eif3c	97	64.176	Scophthalmus_maximus
ENSCCAG00000029099	-	99	64.719	ENSSDUG00000023117	eif3c	99	64.713	Seriola_dumerili
ENSCCAG00000029099	-	98	64.128	ENSSLDG00000009706	eif3c	95	70.458	Seriola_lalandi_dorsalis
ENSCCAG00000029099	-	98	71.476	ENSSPUG00000016470	-	99	72.841	Sphenodon_punctatus
ENSCCAG00000029099	-	99	64.013	ENSSPAG00000000426	eif3c	99	64.215	Stegastes_partitus
ENSCCAG00000029099	-	99	81.648	ENSSSCG00000034927	-	99	83.370	Sus_scrofa
ENSCCAG00000029099	-	98	63.907	ENSTRUG00000008951	eif3c	98	64.622	Takifugu_rubripes
ENSCCAG00000029099	-	98	62.472	ENSTNIG00000015210	eif3c	99	63.506	Tetraodon_nigroviridis
ENSCCAG00000029099	-	99	81.868	ENSTTRG00000005880	-	99	83.150	Tursiops_truncatus
ENSCCAG00000029099	-	73	84.356	ENSUAMG00000001127	-	95	82.154	Ursus_americanus
ENSCCAG00000029099	-	99	81.978	ENSUMAG00000010927	-	99	83.260	Ursus_maritimus
ENSCCAG00000029099	-	99	80.659	ENSVVUG00000025970	-	99	81.938	Vulpes_vulpes
ENSCCAG00000029099	-	98	66.521	ENSXETG00000002941	eif3c	99	68.237	Xenopus_tropicalis
ENSCCAG00000029099	-	99	62.798	ENSXMAG00000013796	eif3c	99	63.417	Xiphophorus_maculatus