EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000029186 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 5221 bases
Position: chrKV389605.1:1918327-1923547
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000022839	KH_1	PF00013.29	5.5e-45	1	3
ENSCCAP00000022839	KH_1	PF00013.29	5.5e-45	2	3
ENSCCAP00000022839	KH_1	PF00013.29	5.5e-45	3	3
ENSCCAP00000022827	KH_1	PF00013.29	6.7e-45	1	3
ENSCCAP00000022827	KH_1	PF00013.29	6.7e-45	2	3
ENSCCAP00000022827	KH_1	PF00013.29	6.7e-45	3	3
ENSCCAP00000022789	KH_1	PF00013.29	8.8e-45	1	3
ENSCCAP00000022789	KH_1	PF00013.29	8.8e-45	2	3
ENSCCAP00000022789	KH_1	PF00013.29	8.8e-45	3	3
ENSCCAP00000022814	KH_1	PF00013.29	9.1e-45	1	3
ENSCCAP00000022814	KH_1	PF00013.29	9.1e-45	2	3
ENSCCAP00000022814	KH_1	PF00013.29	9.1e-45	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000040314	-	1089	-	ENSCCAP00000022814	362 (aa)	-	A0A2K5R3V8
ENSCCAT00000040339	-	987	-	ENSCCAP00000022839	328 (aa)	-	A0A2K5R3Y4
ENSCCAT00000040289	-	1083	-	ENSCCAP00000022789	360 (aa)	-	A0A2K5R3T7
ENSCCAT00000040327	-	1026	-	ENSCCAP00000022827	341 (aa)	-	A0A2K5R3V7

Gene Model

Click here to download ENSCCAG00000029186's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000029186's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000029186	-	96	30.597	ENSCCAG00000034879	IGF2BP2	61	30.597
ENSCCAG00000029186	-	95	80.247	ENSCCAG00000012038	PCBP2	100	80.061
ENSCCAG00000029186	-	99	65.079	ENSCCAG00000033268	PCBP4	77	65.079
ENSCCAG00000029186	-	88	42.718	ENSCCAG00000026536	-	53	50.000
ENSCCAG00000029186	-	75	32.143	ENSCCAG00000025297	KHSRP	59	35.821
ENSCCAG00000029186	-	96	67.508	ENSCCAG00000024561	PCBP3	100	58.449
ENSCCAG00000029186	-	96	37.778	ENSCCAG00000026410	NOVA1	61	35.238
ENSCCAG00000029186	-	98	91.292	ENSCCAG00000019842	-	100	91.292
ENSCCAG00000029186	-	88	43.137	ENSCCAG00000034658	HNRNPK	53	53.968
ENSCCAG00000029186	-	79	36.842	ENSCCAG00000036313	FUBP3	67	36.842

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000029186	-	98	91.292	ENSG00000169564	PCBP1	100	91.292	Homo_sapiens
ENSCCAG00000029186	-	98	88.764	ENSAMEG00000016094	PCBP1	100	88.764	Ailuropoda_melanoleuca
ENSCCAG00000029186	-	98	81.461	ENSANAG00000023938	-	100	81.461	Aotus_nancymaae
ENSCCAG00000029186	-	86	87.542	ENSANAG00000027108	-	100	87.943	Aotus_nancymaae
ENSCCAG00000029186	-	97	80.747	ENSANAG00000026077	-	99	80.398	Aotus_nancymaae
ENSCCAG00000029186	-	78	84.099	ENSANAG00000022494	-	100	84.191	Aotus_nancymaae
ENSCCAG00000029186	-	96	88.728	ENSANAG00000026989	-	99	88.728	Aotus_nancymaae
ENSCCAG00000029186	-	78	86.219	ENSANAG00000019364	-	100	86.219	Aotus_nancymaae
ENSCCAG00000029186	-	78	85.866	ENSANAG00000031745	-	100	85.866	Aotus_nancymaae
ENSCCAG00000029186	-	98	84.179	ENSANAG00000033377	-	100	84.179	Aotus_nancymaae
ENSCCAG00000029186	-	90	91.975	ENSBTAG00000008985	PCBP1	99	91.975	Bos_taurus
ENSCCAG00000029186	-	99	85.994	ENSCJAG00000038388	-	95	85.994	Callithrix_jacchus
ENSCCAG00000029186	-	98	91.011	ENSCAFG00000003326	PCBP1	100	91.011	Canis_familiaris
ENSCCAG00000029186	-	98	91.292	ENSCHIG00000007923	PCBP1	100	91.292	Capra_hircus
ENSCCAG00000029186	-	98	90.730	ENSTSYG00000027848	PCBP1	100	90.730	Carlito_syrichta
ENSCCAG00000029186	-	98	91.292	ENSCPOG00000013511	PCBP1	100	91.292	Cavia_porcellus
ENSCCAG00000029186	-	98	91.292	ENSCATG00000015029	PCBP1	100	91.292	Cercocebus_atys
ENSCCAG00000029186	-	98	90.730	ENSCLAG00000017909	PCBP1	100	90.730	Chinchilla_lanigera
ENSCCAG00000029186	-	98	91.292	ENSCSAG00000019441	PCBP1	100	91.292	Chlorocebus_sabaeus
ENSCCAG00000029186	-	70	75.099	ENSCANG00000033810	-	87	75.099	Colobus_angolensis_palliatus
ENSCCAG00000029186	-	98	81.461	ENSCANG00000032470	-	94	81.461	Colobus_angolensis_palliatus
ENSCCAG00000029186	-	98	91.292	ENSCANG00000018039	-	100	91.292	Colobus_angolensis_palliatus
ENSCCAG00000029186	-	98	91.292	ENSCGRG00001015078	Pcbp1	100	91.292	Cricetulus_griseus_chok1gshd
ENSCCAG00000029186	-	98	91.292	ENSCGRG00000018899	Pcbp1	100	91.292	Cricetulus_griseus_crigri
ENSCCAG00000029186	-	79	89.399	ENSDNOG00000036372	PCBP1	99	89.825	Dasypus_novemcinctus
ENSCCAG00000029186	-	98	91.292	ENSDORG00000008216	Pcbp1	100	91.292	Dipodomys_ordii
ENSCCAG00000029186	-	98	91.292	ENSFCAG00000022238	PCBP1	100	91.292	Felis_catus
ENSCCAG00000029186	-	98	91.011	ENSFDAG00000019637	PCBP1	100	91.011	Fukomys_damarensis
ENSCCAG00000029186	-	98	91.292	ENSGGOG00000028130	PCBP1	100	91.292	Gorilla_gorilla
ENSCCAG00000029186	-	98	91.011	ENSHGLG00000020345	Pcbp1	100	91.011	Heterocephalus_glaber_female
ENSCCAG00000029186	-	98	89.045	ENSHGLG00000020243	-	100	89.045	Heterocephalus_glaber_female
ENSCCAG00000029186	-	98	91.011	ENSHGLG00100019761	Pcbp1	100	91.011	Heterocephalus_glaber_male
ENSCCAG00000029186	-	98	90.730	ENSHGLG00100019620	-	100	90.730	Heterocephalus_glaber_male
ENSCCAG00000029186	-	98	91.292	ENSSTOG00000026002	PCBP1	100	91.292	Ictidomys_tridecemlineatus
ENSCCAG00000029186	-	98	91.292	ENSJJAG00000000737	Pcbp1	100	91.292	Jaculus_jaculus
ENSCCAG00000029186	-	92	89.439	ENSMFAG00000003400	PCBP1	100	89.439	Macaca_fascicularis
ENSCCAG00000029186	-	98	91.292	ENSMMUG00000038295	PCBP1	100	91.292	Macaca_mulatta
ENSCCAG00000029186	-	98	91.292	ENSMNEG00000002934	PCBP1	100	91.292	Macaca_nemestrina
ENSCCAG00000029186	-	98	91.292	ENSMLEG00000027389	PCBP1	100	91.292	Mandrillus_leucophaeus
ENSCCAG00000029186	-	98	91.292	ENSMAUG00000009843	Pcbp1	100	91.292	Mesocricetus_auratus
ENSCCAG00000029186	-	98	91.292	ENSMICG00000038221	PCBP1	100	91.292	Microcebus_murinus
ENSCCAG00000029186	-	98	91.292	ENSMOCG00000008102	Pcbp1	100	91.292	Microtus_ochrogaster
ENSCCAG00000029186	-	98	91.292	MGP_CAROLIEiJ_G0028598	Pcbp1	100	91.292	Mus_caroli
ENSCCAG00000029186	-	98	91.292	ENSMUSG00000051695	Pcbp1	100	91.292	Mus_musculus
ENSCCAG00000029186	-	98	91.292	MGP_PahariEiJ_G0022335	Pcbp1	100	91.292	Mus_pahari
ENSCCAG00000029186	-	98	91.292	MGP_SPRETEiJ_G0029609	Pcbp1	100	91.292	Mus_spretus
ENSCCAG00000029186	-	98	88.764	ENSMPUG00000007175	PCBP1	100	88.764	Mustela_putorius_furo
ENSCCAG00000029186	-	98	91.292	ENSMLUG00000014173	PCBP1	100	91.292	Myotis_lucifugus
ENSCCAG00000029186	-	98	91.292	ENSNGAG00000014909	-	100	91.292	Nannospalax_galili
ENSCCAG00000029186	-	98	91.292	ENSNGAG00000011957	-	100	91.292	Nannospalax_galili
ENSCCAG00000029186	-	98	91.292	ENSNLEG00000018722	PCBP1	100	91.292	Nomascus_leucogenys
ENSCCAG00000029186	-	98	75.623	ENSODEG00000000263	PCBP1	100	75.623	Octodon_degus
ENSCCAG00000029186	-	98	91.292	ENSOCUG00000003634	PCBP1	100	91.292	Oryctolagus_cuniculus
ENSCCAG00000029186	-	98	88.764	ENSOGAG00000028946	PCBP1	100	88.764	Otolemur_garnettii
ENSCCAG00000029186	-	98	91.292	ENSOARG00000019516	PCBP1	100	91.292	Ovis_aries
ENSCCAG00000029186	-	98	89.577	ENSPPAG00000036116	PCBP1	99	89.916	Pan_paniscus
ENSCCAG00000029186	-	98	91.292	ENSPPRG00000020533	PCBP1	100	91.292	Panthera_pardus
ENSCCAG00000029186	-	98	91.292	ENSPTIG00000007318	PCBP1	100	91.292	Panthera_tigris_altaica
ENSCCAG00000029186	-	98	91.292	ENSPTRG00000012025	PCBP1	100	91.292	Pan_troglodytes
ENSCCAG00000029186	-	98	91.292	ENSPANG00000011314	PCBP1	100	91.292	Papio_anubis
ENSCCAG00000029186	-	98	91.292	ENSPPYG00000012328	PCBP1	100	91.292	Pongo_abelii
ENSCCAG00000029186	-	98	91.292	ENSPCOG00000026934	PCBP1	100	91.292	Propithecus_coquereli
ENSCCAG00000029186	-	98	90.449	ENSRROG00000009684	-	95	90.449	Rhinopithecus_roxellana
ENSCCAG00000029186	-	92	90.964	ENSRROG00000012514	-	100	90.964	Rhinopithecus_roxellana
ENSCCAG00000029186	-	98	88.854	ENSSBOG00000035309	-	94	88.854	Saimiri_boliviensis_boliviensis
ENSCCAG00000029186	-	98	91.011	ENSSSCG00000027224	PCBP1	100	91.011	Sus_scrofa
ENSCCAG00000029186	-	90	91.641	ENSVVUG00000028033	PCBP1	99	91.641	Vulpes_vulpes