EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000029290 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: 39S ribosomal protein L42%2C mitochondrial pseudogene
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 5024 bases
Position: chrKV390047.1:721729-726752
Accession: 108295117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000022972	MRP-S32	PF10210.9	6.9e-20	1	1
ENSCCAP00000022969	MRP-S32	PF10210.9	2.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000040470	-	399	-	ENSCCAP00000022969	132 (aa)	-	A0A2K5R4B1
ENSCCAT00000040473	-	288	-	ENSCCAP00000022972	95 (aa)	-	A0A2K5R4B0

Gene Model

Click here to download ENSCCAG00000029290's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000029290's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000029290	-	100	67.925	ENSCCAG00000032203	-	96	67.925
ENSCCAG00000029290	-	93	72.368	ENSCCAG00000031179	-	98	72.368

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000029290	-	93	67.763	ENSG00000198015	MRPL42	100	72.656	Homo_sapiens
ENSCCAG00000029290	-	85	48.819	ENSAMEG00000009832	MRPL42	84	66.355	Ailuropoda_melanoleuca
ENSCCAG00000029290	-	80	45.263	ENSACIG00000017826	mrpl42	68	45.263	Amphilophus_citrinellus
ENSCCAG00000029290	-	80	51.579	ENSAPLG00000015057	MRPL42	89	45.669	Anas_platyrhynchos
ENSCCAG00000029290	-	61	68.687	ENSANAG00000036083	-	83	68.687	Aotus_nancymaae
ENSCCAG00000029290	-	98	76.351	ENSANAG00000033101	-	98	76.351	Aotus_nancymaae
ENSCCAG00000029290	-	95	70.345	ENSANAG00000036935	-	99	70.345	Aotus_nancymaae
ENSCCAG00000029290	-	87	74.074	ENSANAG00000000692	-	96	74.074	Aotus_nancymaae
ENSCCAG00000029290	-	80	54.255	ENSBTAG00000052971	-	84	58.242	Bos_taurus
ENSCCAG00000029290	-	83	66.406	ENSBTAG00000002708	MRPL42	100	66.406	Bos_taurus
ENSCCAG00000029290	-	93	71.711	ENSCJAG00000046971	MRPL42	98	71.711	Callithrix_jacchus
ENSCCAG00000029290	-	99	61.062	ENSCAFG00020022967	-	99	61.062	Canis_lupus_dingo
ENSCCAG00000029290	-	83	67.969	ENSCHIG00000014921	MRPL42	100	67.969	Capra_hircus
ENSCCAG00000029290	-	83	66.667	ENSTSYG00000036466	-	88	66.667	Carlito_syrichta
ENSCCAG00000029290	-	83	69.531	ENSTSYG00000006370	-	90	69.531	Carlito_syrichta
ENSCCAG00000029290	-	78	63.441	ENSTSYG00000032810	-	85	63.441	Carlito_syrichta
ENSCCAG00000029290	-	83	77.064	ENSCAPG00000015105	-	89	77.064	Cavia_aperea
ENSCCAG00000029290	-	80	61.053	ENSCAPG00000016985	-	79	66.038	Cavia_aperea
ENSCCAG00000029290	-	78	65.574	ENSCPOG00000030015	-	86	66.129	Cavia_porcellus
ENSCCAG00000029290	-	83	77.064	ENSCPOG00000008943	-	89	77.064	Cavia_porcellus
ENSCCAG00000029290	-	93	67.105	ENSCATG00000037616	MRPL42	98	67.105	Cercocebus_atys
ENSCCAG00000029290	-	83	65.625	ENSCLAG00000005421	MRPL42	90	65.625	Chinchilla_lanigera
ENSCCAG00000029290	-	83	71.094	ENSCSAG00000003706	MRPL42	90	71.094	Chlorocebus_sabaeus
ENSCCAG00000029290	-	80	51.579	ENSCPBG00000001581	MRPL42	74	54.206	Chrysemys_picta_bellii
ENSCCAG00000029290	-	93	67.763	ENSCANG00000033457	MRPL42	98	67.763	Colobus_angolensis_palliatus
ENSCCAG00000029290	-	80	60.800	ENSCGRG00001012694	-	87	60.800	Cricetulus_griseus_chok1gshd
ENSCCAG00000029290	-	76	54.622	ENSCGRG00001003813	-	90	54.622	Cricetulus_griseus_chok1gshd
ENSCCAG00000029290	-	80	60.800	ENSCGRG00000003801	Mrpl42	89	60.800	Cricetulus_griseus_crigri
ENSCCAG00000029290	-	83	62.500	ENSDNOG00000032710	-	90	62.500	Dasypus_novemcinctus
ENSCCAG00000029290	-	85	63.359	ENSDNOG00000049701	-	93	63.359	Dasypus_novemcinctus
ENSCCAG00000029290	-	80	66.400	ENSDORG00000015571	Mrpl42	89	66.400	Dipodomys_ordii
ENSCCAG00000029290	-	63	72.131	ENSETEG00000014745	-	81	49.091	Echinops_telfairi
ENSCCAG00000029290	-	83	69.531	ENSEASG00005019361	MRPL42	90	69.531	Equus_asinus_asinus
ENSCCAG00000029290	-	83	67.969	ENSECAG00000026888	MRPL42	90	67.969	Equus_caballus
ENSCCAG00000029290	-	80	63.441	ENSFCAG00000040567	-	89	70.370	Felis_catus
ENSCCAG00000029290	-	83	70.312	ENSFCAG00000037907	-	88	71.200	Felis_catus
ENSCCAG00000029290	-	94	45.395	ENSFCAG00000036356	-	97	45.395	Felis_catus
ENSCCAG00000029290	-	80	51.579	ENSFALG00000010717	MRPL42	84	47.200	Ficedula_albicollis
ENSCCAG00000029290	-	79	66.667	ENSFDAG00000018129	MRPL42	87	66.667	Fukomys_damarensis
ENSCCAG00000029290	-	80	50.526	ENSGALG00000011293	MRPL42	74	50.000	Gallus_gallus
ENSCCAG00000029290	-	80	53.684	ENSGAGG00000010125	MRPL42	73	55.140	Gopherus_agassizii
ENSCCAG00000029290	-	93	67.763	ENSGGOG00000022760	MRPL42	98	67.763	Gorilla_gorilla
ENSCCAG00000029290	-	84	65.385	ENSHGLG00000007399	-	97	65.152	Heterocephalus_glaber_female
ENSCCAG00000029290	-	79	65.854	ENSHGLG00000008248	-	100	65.854	Heterocephalus_glaber_female
ENSCCAG00000029290	-	78	66.393	ENSHGLG00100013257	-	99	66.393	Heterocephalus_glaber_male
ENSCCAG00000029290	-	80	68.548	ENSHGLG00100018317	-	87	68.548	Heterocephalus_glaber_male
ENSCCAG00000029290	-	83	63.281	ENSSTOG00000026544	MRPL42	90	63.281	Ictidomys_tridecemlineatus
ENSCCAG00000029290	-	80	47.368	ENSLACG00000006919	MRPL42	69	51.020	Latimeria_chalumnae
ENSCCAG00000029290	-	98	50.360	ENSLAFG00000013779	MRPL42	99	50.360	Loxodonta_africana
ENSCCAG00000029290	-	93	67.763	ENSMFAG00000032330	MRPL42	98	67.763	Macaca_fascicularis
ENSCCAG00000029290	-	93	67.763	ENSMMUG00000016805	MRPL42	97	69.630	Macaca_mulatta
ENSCCAG00000029290	-	93	67.763	ENSMNEG00000028853	MRPL42	98	67.763	Macaca_nemestrina
ENSCCAG00000029290	-	83	71.875	ENSMLEG00000038104	MRPL42	90	71.875	Mandrillus_leucophaeus
ENSCCAG00000029290	-	80	51.579	ENSMGAG00000011346	MRPL42	75	49.541	Meleagris_gallopavo
ENSCCAG00000029290	-	80	56.800	ENSMAUG00000010057	-	89	56.800	Mesocricetus_auratus
ENSCCAG00000029290	-	80	52.632	ENSMAUG00000018130	-	80	52.632	Mesocricetus_auratus
ENSCCAG00000029290	-	83	67.969	ENSMICG00000032596	-	90	67.969	Microcebus_murinus
ENSCCAG00000029290	-	80	60.000	ENSMICG00000045594	-	96	60.000	Microcebus_murinus
ENSCCAG00000029290	-	89	67.143	ENSMICG00000035189	-	97	67.143	Microcebus_murinus
ENSCCAG00000029290	-	95	65.101	ENSMICG00000036541	-	100	65.101	Microcebus_murinus
ENSCCAG00000029290	-	96	57.273	ENSMICG00000028094	-	96	57.273	Microcebus_murinus
ENSCCAG00000029290	-	80	61.600	ENSMOCG00000013541	-	89	61.600	Microtus_ochrogaster
ENSCCAG00000029290	-	80	56.800	ENSMOCG00000004616	-	88	56.800	Microtus_ochrogaster
ENSCCAG00000029290	-	80	58.730	MGP_CAROLIEiJ_G0015750	Mrpl42	89	58.730	Mus_caroli
ENSCCAG00000029290	-	80	58.730	ENSMUSG00000062981	Mrpl42	89	58.730	Mus_musculus
ENSCCAG00000029290	-	83	66.406	ENSMLUG00000025058	-	90	66.406	Myotis_lucifugus
ENSCCAG00000029290	-	83	66.406	ENSMLUG00000029623	-	90	66.406	Myotis_lucifugus
ENSCCAG00000029290	-	93	60.284	ENSMLUG00000023702	-	99	60.284	Myotis_lucifugus
ENSCCAG00000029290	-	83	66.406	ENSNGAG00000000717	Mrpl42	100	66.406	Nannospalax_galili
ENSCCAG00000029290	-	93	67.763	ENSNLEG00000005699	MRPL42	98	67.763	Nomascus_leucogenys
ENSCCAG00000029290	-	80	63.158	ENSOPRG00000010967	MRPL42	89	59.843	Ochotona_princeps
ENSCCAG00000029290	-	83	60.465	ENSODEG00000012689	-	90	62.016	Octodon_degus
ENSCCAG00000029290	-	80	56.780	ENSODEG00000016452	-	86	58.475	Octodon_degus
ENSCCAG00000029290	-	80	62.500	ENSODEG00000008681	-	96	63.158	Octodon_degus
ENSCCAG00000029290	-	83	68.750	ENSOCUG00000010928	MRPL42	90	68.750	Oryctolagus_cuniculus
ENSCCAG00000029290	-	83	69.531	ENSOGAG00000025600	-	90	69.531	Otolemur_garnettii
ENSCCAG00000029290	-	83	68.750	ENSOGAG00000025686	-	90	68.750	Otolemur_garnettii
ENSCCAG00000029290	-	83	66.406	ENSOGAG00000026395	-	90	66.406	Otolemur_garnettii
ENSCCAG00000029290	-	83	63.281	ENSOGAG00000027617	-	90	63.281	Otolemur_garnettii
ENSCCAG00000029290	-	83	63.281	ENSOGAG00000024156	-	90	63.281	Otolemur_garnettii
ENSCCAG00000029290	-	80	64.211	ENSOGAG00000030438	-	86	65.289	Otolemur_garnettii
ENSCCAG00000029290	-	80	64.800	ENSOGAG00000034004	-	88	64.800	Otolemur_garnettii
ENSCCAG00000029290	-	83	67.969	ENSOARG00000015849	MRPL42	100	67.969	Ovis_aries
ENSCCAG00000029290	-	93	67.763	ENSPPAG00000038254	MRPL42	98	67.763	Pan_paniscus
ENSCCAG00000029290	-	80	72.000	ENSPPRG00000015755	-	88	72.000	Panthera_pardus
ENSCCAG00000029290	-	80	71.200	ENSPPRG00000013218	-	88	71.200	Panthera_pardus
ENSCCAG00000029290	-	80	62.366	ENSPPRG00000017935	-	89	72.222	Panthera_pardus
ENSCCAG00000029290	-	88	52.308	ENSPPRG00000006533	-	91	52.308	Panthera_pardus
ENSCCAG00000029290	-	80	71.200	ENSPTIG00000019099	-	88	71.200	Panthera_tigris_altaica
ENSCCAG00000029290	-	91	56.481	ENSPTIG00000009717	-	83	70.297	Panthera_tigris_altaica
ENSCCAG00000029290	-	80	71.200	ENSPTIG00000009394	-	88	71.200	Panthera_tigris_altaica
ENSCCAG00000029290	-	93	67.763	ENSPTRG00000022791	MRPL42	98	67.763	Pan_troglodytes
ENSCCAG00000029290	-	99	69.027	ENSPANG00000030179	MRPL42	99	69.027	Papio_anubis
ENSCCAG00000029290	-	80	51.579	ENSPSIG00000010745	MRPL42	73	51.852	Pelodiscus_sinensis
ENSCCAG00000029290	-	80	61.600	ENSPEMG00000020562	-	98	61.600	Peromyscus_maniculatus_bairdii
ENSCCAG00000029290	-	83	48.507	ENSPCIG00000001472	-	70	48.507	Phascolarctos_cinereus
ENSCCAG00000029290	-	83	71.875	ENSPPYG00000004833	MRPL42	90	71.875	Pongo_abelii
ENSCCAG00000029290	-	77	64.130	ENSPCAG00000003791	MRPL42	89	68.269	Procavia_capensis
ENSCCAG00000029290	-	80	63.200	ENSPCOG00000025008	-	93	63.200	Propithecus_coquereli
ENSCCAG00000029290	-	86	66.917	ENSPCOG00000014986	-	96	66.917	Propithecus_coquereli
ENSCCAG00000029290	-	83	62.385	ENSPCOG00000018896	-	88	62.385	Propithecus_coquereli
ENSCCAG00000029290	-	84	41.525	ENSPVAG00000013736	-	100	41.525	Pteropus_vampyrus
ENSCCAG00000029290	-	80	60.000	ENSRNOG00000042740	Mrpl42	89	60.000	Rattus_norvegicus
ENSCCAG00000029290	-	80	56.349	ENSRNOG00000021867	AABR07009508.1	88	56.349	Rattus_norvegicus
ENSCCAG00000029290	-	95	49.091	ENSRNOG00000031132	LOC367117	54	49.091	Rattus_norvegicus
ENSCCAG00000029290	-	83	70.312	ENSRBIG00000011046	-	90	70.312	Rhinopithecus_bieti
ENSCCAG00000029290	-	93	66.165	ENSRBIG00000044361	-	98	66.165	Rhinopithecus_bieti
ENSCCAG00000029290	-	93	66.447	ENSRROG00000033949	MRPL42	98	66.447	Rhinopithecus_roxellana
ENSCCAG00000029290	-	99	71.053	ENSSBOG00000027483	-	99	71.053	Saimiri_boliviensis_boliviensis
ENSCCAG00000029290	-	65	91.935	ENSSBOG00000025086	-	70	91.935	Saimiri_boliviensis_boliviensis
ENSCCAG00000029290	-	83	75.000	ENSSBOG00000009656	-	90	75.000	Saimiri_boliviensis_boliviensis
ENSCCAG00000029290	-	80	48.421	ENSSFOG00015006975	mrpl42	73	44.340	Scleropages_formosus
ENSCCAG00000029290	-	80	52.632	ENSSPUG00000015009	-	77	53.509	Sphenodon_punctatus
ENSCCAG00000029290	-	66	43.902	ENSSPAG00000013637	mrpl42	71	46.154	Stegastes_partitus
ENSCCAG00000029290	-	64	72.131	ENSSSCG00000035613	-	56	72.131	Sus_scrofa
ENSCCAG00000029290	-	99	40.000	ENSSSCG00000034693	-	97	40.000	Sus_scrofa
ENSCCAG00000029290	-	74	49.573	ENSSSCG00000036897	-	89	49.573	Sus_scrofa
ENSCCAG00000029290	-	83	67.969	ENSSSCG00000030478	-	90	67.969	Sus_scrofa
ENSCCAG00000029290	-	80	51.579	ENSTGUG00000008272	MRPL42	88	50.962	Taeniopygia_guttata
ENSCCAG00000029290	-	66	40.244	ENSTNIG00000018478	mrpl42	70	40.217	Tetraodon_nigroviridis
ENSCCAG00000029290	-	99	54.135	ENSTTRG00000003312	MRPL42	99	54.135	Tursiops_truncatus
ENSCCAG00000029290	-	83	68.750	ENSUAMG00000025405	-	90	68.750	Ursus_americanus
ENSCCAG00000029290	-	83	68.750	ENSUMAG00000003107	-	99	68.750	Ursus_maritimus
ENSCCAG00000029290	-	73	60.345	ENSUMAG00000014643	-	72	60.345	Ursus_maritimus
ENSCCAG00000029290	-	80	62.105	ENSVPAG00000007658	MRPL42	88	67.308	Vicugna_pacos
ENSCCAG00000029290	-	86	64.662	ENSVVUG00000011842	-	90	66.406	Vulpes_vulpes
ENSCCAG00000029290	-	89	34.286	ENSXMAG00000004057	mrpl42	96	32.836	Xiphophorus_maculatus