EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000029361 (Gene tree)
Gene ID: 108284391
Gene Symbol: -
Alias: -
Full Name: splicing factor proline and glutamine rich
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 16990 bases
Position: chrKV389703.1:3014172-3031161
Accession: 108284391
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000023162	RRM_1	PF00076.22	4.7e-30	1	2
ENSCCAP00000023162	RRM_1	PF00076.22	4.7e-30	2	2
ENSCCAP00000023154	RRM_1	PF00076.22	4.7e-30	1	2
ENSCCAP00000023154	RRM_1	PF00076.22	4.7e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000040655	-	5788	XM_017501101	ENSCCAP00000023154	707 (aa)	XP_017356590	A0A2K5R4V5
ENSCCAT00000040663	-	2118	-	ENSCCAP00000023162	705 (aa)	-	A0A2K5R4U7

Gene Model

Click here to download ENSCCAG00000029361's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000029361's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000029361	-	54	66.408	ENSCCAG00000033498	PSPC1	92	57.700

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000029361	-	100	99.293	ENSG00000116560	SFPQ	100	99.293	Homo_sapiens
ENSCCAG00000029361	-	61	74.596	ENSAPOG00000024257	sfpq	62	74.376	Acanthochromis_polyacanthus
ENSCCAG00000029361	-	62	100.000	ENSAMEG00000000815	SFPQ	100	100.000	Ailuropoda_melanoleuca
ENSCCAG00000029361	-	61	73.318	ENSACIG00000000905	sfpq	72	71.264	Amphilophus_citrinellus
ENSCCAG00000029361	-	61	74.246	ENSAOCG00000002889	sfpq	61	73.696	Amphiprion_ocellaris
ENSCCAG00000029361	-	61	74.246	ENSAPEG00000016556	sfpq	61	73.696	Amphiprion_percula
ENSCCAG00000029361	-	62	76.765	ENSATEG00000002981	sfpq	67	76.082	Anabas_testudineus
ENSCCAG00000029361	-	50	75.424	ENSANAG00000021268	-	100	74.359	Aotus_nancymaae
ENSCCAG00000029361	-	92	94.545	ENSANAG00000027438	-	79	96.296	Aotus_nancymaae
ENSCCAG00000029361	-	50	76.000	ENSANAG00000037798	-	99	75.714	Aotus_nancymaae
ENSCCAG00000029361	-	63	72.973	ENSACLG00000022332	sfpq	63	73.529	Astatotilapia_calliptera
ENSCCAG00000029361	-	62	69.841	ENSAMXG00000011538	sfpq	66	71.493	Astyanax_mexicanus
ENSCCAG00000029361	-	100	96.479	ENSBTAG00000016328	SFPQ	100	96.479	Bos_taurus
ENSCCAG00000029361	-	100	99.435	ENSCJAG00000001431	SFPQ	100	99.435	Callithrix_jacchus
ENSCCAG00000029361	-	85	80.826	ENSCAFG00000017608	-	71	88.820	Canis_familiaris
ENSCCAG00000029361	-	85	84.718	ENSCAFG00000018271	-	73	89.072	Canis_familiaris
ENSCCAG00000029361	-	100	91.231	ENSCAFG00000003595	-	100	91.231	Canis_familiaris
ENSCCAG00000029361	-	85	84.577	ENSCAFG00020004881	-	67	92.222	Canis_lupus_dingo
ENSCCAG00000029361	-	50	91.404	ENSCAFG00020010702	-	100	91.404	Canis_lupus_dingo
ENSCCAG00000029361	-	79	93.548	ENSCHIG00000023097	SFPQ	100	95.798	Capra_hircus
ENSCCAG00000029361	-	50	100.000	ENSTSYG00000037120	-	100	100.000	Carlito_syrichta
ENSCCAG00000029361	-	50	91.168	ENSCPOG00000015018	-	100	88.705	Cavia_porcellus
ENSCCAG00000029361	-	91	97.059	ENSCATG00000036179	-	95	97.059	Cercocebus_atys
ENSCCAG00000029361	-	96	80.786	ENSCATG00000032664	-	96	81.050	Cercocebus_atys
ENSCCAG00000029361	-	50	100.000	ENSCLAG00000009583	-	100	100.000	Chinchilla_lanigera
ENSCCAG00000029361	-	100	99.294	ENSCSAG00000001082	SFPQ	100	99.294	Chlorocebus_sabaeus
ENSCCAG00000029361	-	54	95.263	ENSCHOG00000009131	SFPQ	100	95.263	Choloepus_hoffmanni
ENSCCAG00000029361	-	63	92.617	ENSCPBG00000018674	SFPQ	69	92.601	Chrysemys_picta_bellii
ENSCCAG00000029361	-	50	100.000	ENSCANG00000028087	-	100	100.000	Colobus_angolensis_palliatus
ENSCCAG00000029361	-	85	92.371	ENSCGRG00001011698	Sfpq	69	97.934	Cricetulus_griseus_chok1gshd
ENSCCAG00000029361	-	61	99.536	ENSCGRG00000010128	Sfpq	95	99.536	Cricetulus_griseus_crigri
ENSCCAG00000029361	-	99	56.118	ENSCSEG00000007852	sfpq	67	72.036	Cynoglossus_semilaevis
ENSCCAG00000029361	-	60	70.023	ENSCVAG00000019538	sfpq	64	66.981	Cyprinodon_variegatus
ENSCCAG00000029361	-	62	71.298	ENSDARG00000011564	sfpq	100	83.478	Danio_rerio
ENSCCAG00000029361	-	100	96.348	ENSDNOG00000049454	SFPQ	100	96.348	Dasypus_novemcinctus
ENSCCAG00000029361	-	68	99.587	ENSDORG00000008109	Sfpq	69	99.587	Dipodomys_ordii
ENSCCAG00000029361	-	69	92.807	ENSETEG00000001095	SFPQ	67	92.807	Echinops_telfairi
ENSCCAG00000029361	-	100	96.494	ENSEASG00005012012	SFPQ	100	96.494	Equus_asinus_asinus
ENSCCAG00000029361	-	100	96.494	ENSECAG00000000642	SFPQ	100	96.494	Equus_caballus
ENSCCAG00000029361	-	61	72.917	ENSELUG00000023145	sfpq	66	71.795	Esox_lucius
ENSCCAG00000029361	-	100	97.313	ENSFCAG00000042862	SFPQ	100	97.313	Felis_catus
ENSCCAG00000029361	-	50	94.587	ENSFALG00000000731	SFPQ	100	94.587	Ficedula_albicollis
ENSCCAG00000029361	-	50	90.598	ENSFDAG00000017723	-	100	90.935	Fukomys_damarensis
ENSCCAG00000029361	-	61	67.051	ENSFHEG00000015200	sfpq	56	68.966	Fundulus_heteroclitus
ENSCCAG00000029361	-	61	73.782	ENSGMOG00000011957	sfpq	65	73.782	Gadus_morhua
ENSCCAG00000029361	-	61	74.943	ENSGMOG00000011950	SFPQ	88	65.490	Gadus_morhua
ENSCCAG00000029361	-	62	94.292	ENSGALG00000002514	SFPQ	68	94.292	Gallus_gallus
ENSCCAG00000029361	-	74	60.755	ENSGAFG00000014571	sfpq	57	77.914	Gambusia_affinis
ENSCCAG00000029361	-	88	59.531	ENSGACG00000002034	sfpq	68	74.654	Gasterosteus_aculeatus
ENSCCAG00000029361	-	75	100.000	ENSGGOG00000026354	SFPQ	100	100.000	Gorilla_gorilla
ENSCCAG00000029361	-	63	72.973	ENSHBUG00000016818	sfpq	63	73.529	Haplochromis_burtoni
ENSCCAG00000029361	-	100	94.655	ENSHGLG00000012001	SFPQ	70	98.357	Heterocephalus_glaber_female
ENSCCAG00000029361	-	50	100.000	ENSHGLG00100004136	-	100	100.000	Heterocephalus_glaber_male
ENSCCAG00000029361	-	63	73.214	ENSHCOG00000008612	sfpq	86	60.039	Hippocampus_comes
ENSCCAG00000029361	-	62	71.330	ENSIPUG00000013076	SFPQ	73	72.769	Ictalurus_punctatus
ENSCCAG00000029361	-	50	100.000	ENSSTOG00000014004	-	100	100.000	Ictidomys_tridecemlineatus
ENSCCAG00000029361	-	68	98.967	ENSJJAG00000015633	Sfpq	69	98.967	Jaculus_jaculus
ENSCCAG00000029361	-	92	55.310	ENSKMAG00000000238	sfpq	54	70.805	Kryptolebias_marmoratus
ENSCCAG00000029361	-	87	58.560	ENSLBEG00000003163	sfpq	57	73.206	Labrus_bergylta
ENSCCAG00000029361	-	61	76.027	ENSLACG00000014728	SFPQ	70	80.093	Latimeria_chalumnae
ENSCCAG00000029361	-	90	61.751	ENSLOCG00000001067	sfpq	70	79.259	Lepisosteus_oculatus
ENSCCAG00000029361	-	68	98.967	ENSLAFG00000015951	SFPQ	75	94.421	Loxodonta_africana
ENSCCAG00000029361	-	100	99.293	ENSMFAG00000000797	SFPQ	100	99.293	Macaca_fascicularis
ENSCCAG00000029361	-	100	99.151	ENSMMUG00000019154	SFPQ	100	99.151	Macaca_mulatta
ENSCCAG00000029361	-	100	99.434	ENSMNEG00000038895	SFPQ	100	99.434	Macaca_nemestrina
ENSCCAG00000029361	-	50	96.866	ENSMLEG00000010643	-	100	96.866	Mandrillus_leucophaeus
ENSCCAG00000029361	-	61	78.190	ENSMAMG00000007875	sfpq	66	77.726	Mastacembelus_armatus
ENSCCAG00000029361	-	99	55.927	ENSMZEG00005026091	sfpq	64	73.529	Maylandia_zebra
ENSCCAG00000029361	-	54	91.049	ENSMGAG00000004237	SFPQ	100	91.049	Meleagris_gallopavo
ENSCCAG00000029361	-	68	98.326	ENSMAUG00000006402	Sfpq	69	97.727	Mesocricetus_auratus
ENSCCAG00000029361	-	100	97.878	ENSMICG00000027265	SFPQ	100	97.878	Microcebus_murinus
ENSCCAG00000029361	-	68	94.813	ENSMOCG00000019075	Sfpq	99	94.813	Microtus_ochrogaster
ENSCCAG00000029361	-	79	63.860	ENSMMOG00000001074	sfpq	65	74.942	Mola_mola
ENSCCAG00000029361	-	63	96.171	ENSMODG00000017937	SFPQ	67	95.556	Monodelphis_domestica
ENSCCAG00000029361	-	61	75.467	ENSMALG00000010381	sfpq	64	76.762	Monopterus_albus
ENSCCAG00000029361	-	68	98.536	MGP_CAROLIEiJ_G0026487	Sfpq	69	97.934	Mus_caroli
ENSCCAG00000029361	-	68	98.536	ENSMUSG00000028820	Sfpq	69	97.934	Mus_musculus
ENSCCAG00000029361	-	85	88.040	MGP_PahariEiJ_G0028818	Sfpq	69	97.934	Mus_pahari
ENSCCAG00000029361	-	68	98.536	MGP_SPRETEiJ_G0027466	Sfpq	69	97.934	Mus_spretus
ENSCCAG00000029361	-	63	97.523	ENSMLUG00000027090	SFPQ	99	97.523	Myotis_lucifugus
ENSCCAG00000029361	-	68	98.351	ENSNGAG00000000888	Sfpq	69	97.938	Nannospalax_galili
ENSCCAG00000029361	-	79	61.632	ENSNBRG00000017479	sfpq	64	73.756	Neolamprologus_brichardi
ENSCCAG00000029361	-	50	100.000	ENSNLEG00000035521	-	100	100.000	Nomascus_leucogenys
ENSCCAG00000029361	-	66	95.900	ENSMEUG00000014082	SFPQ	68	94.667	Notamacropus_eugenii
ENSCCAG00000029361	-	72	93.701	ENSOPRG00000013696	SFPQ	72	95.868	Ochotona_princeps
ENSCCAG00000029361	-	65	87.446	ENSODEG00000005485	SFPQ	86	86.752	Octodon_degus
ENSCCAG00000029361	-	50	97.436	ENSOANG00000008789	-	100	97.436	Ornithorhynchus_anatinus
ENSCCAG00000029361	-	73	89.615	ENSOCUG00000001877	SFPQ	88	98.438	Oryctolagus_cuniculus
ENSCCAG00000029361	-	87	57.734	ENSORLG00000007459	sfpq	57	72.158	Oryzias_latipes
ENSCCAG00000029361	-	88	58.110	ENSORLG00020011818	sfpq	57	72.158	Oryzias_latipes_hni
ENSCCAG00000029361	-	88	57.121	ENSORLG00015002131	sfpq	58	71.494	Oryzias_latipes_hsok
ENSCCAG00000029361	-	74	98.667	ENSOGAG00000027710	SFPQ	99	98.667	Otolemur_garnettii
ENSCCAG00000029361	-	65	99.769	ENSOARG00000019439	SFPQ	71	99.769	Ovis_aries
ENSCCAG00000029361	-	50	99.716	ENSPPRG00000015478	-	100	99.716	Panthera_pardus
ENSCCAG00000029361	-	50	100.000	ENSPTIG00000007710	-	100	100.000	Panthera_tigris_altaica
ENSCCAG00000029361	-	96	94.853	ENSPTRG00000000518	SFPQ	96	94.853	Pan_troglodytes
ENSCCAG00000029361	-	100	81.921	ENSPANG00000005380	SFPQ	72	99.589	Papio_anubis
ENSCCAG00000029361	-	61	76.798	ENSPKIG00000023035	sfpq	73	79.263	Paramormyrops_kingsleyae
ENSCCAG00000029361	-	61	94.664	ENSPSIG00000011494	SFPQ	100	94.664	Pelodiscus_sinensis
ENSCCAG00000029361	-	60	69.575	ENSPMGG00000023883	sfpq	69	69.104	Periophthalmus_magnuspinnatus
ENSCCAG00000029361	-	67	98.514	ENSPEMG00000009794	Sfpq	97	98.514	Peromyscus_maniculatus_bairdii
ENSCCAG00000029361	-	63	95.946	ENSPCIG00000000923	SFPQ	70	93.265	Phascolarctos_cinereus
ENSCCAG00000029361	-	92	53.314	ENSPFOG00000003127	sfpq	71	68.591	Poecilia_formosa
ENSCCAG00000029361	-	100	99.293	ENSPPYG00000001560	SFPQ	100	99.293	Pongo_abelii
ENSCCAG00000029361	-	77	98.834	ENSPCAG00000006164	SFPQ	77	98.834	Procavia_capensis
ENSCCAG00000029361	-	100	97.595	ENSPCOG00000027127	SFPQ	100	97.595	Propithecus_coquereli
ENSCCAG00000029361	-	68	96.901	ENSPVAG00000001865	SFPQ	69	96.901	Pteropus_vampyrus
ENSCCAG00000029361	-	63	72.973	ENSPNYG00000007494	sfpq	62	73.529	Pundamilia_nyererei
ENSCCAG00000029361	-	77	63.486	ENSPNAG00000002128	sfpq	75	71.834	Pygocentrus_nattereri
ENSCCAG00000029361	-	68	98.536	ENSRNOG00000058461	Sfpq	70	97.934	Rattus_norvegicus
ENSCCAG00000029361	-	99	73.864	ENSRBIG00000035286	SFPQ	100	100.000	Rhinopithecus_bieti
ENSCCAG00000029361	-	73	100.000	ENSRROG00000040992	SFPQ	100	100.000	Rhinopithecus_roxellana
ENSCCAG00000029361	-	50	100.000	ENSSBOG00000024972	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSCCAG00000029361	-	50	91.453	ENSSHAG00000012312	-	100	90.883	Sarcophilus_harrisii
ENSCCAG00000029361	-	61	90.869	ENSSHAG00000016107	-	97	90.646	Sarcophilus_harrisii
ENSCCAG00000029361	-	62	75.510	ENSSFOG00015009289	sfpq	79	78.005	Scleropages_formosus
ENSCCAG00000029361	-	64	73.650	ENSSMAG00000018201	sfpq	69	71.957	Scophthalmus_maximus
ENSCCAG00000029361	-	52	100.000	ENSSARG00000006409	SFPQ	100	100.000	Sorex_araneus
ENSCCAG00000029361	-	61	75.058	ENSSPAG00000016550	sfpq	64	75.057	Stegastes_partitus
ENSCCAG00000029361	-	100	96.888	ENSSSCG00000035690	SFPQ	100	96.888	Sus_scrofa
ENSCCAG00000029361	-	61	94.896	ENSTGUG00000001722	SFPQ	100	94.896	Taeniopygia_guttata
ENSCCAG00000029361	-	92	57.927	ENSTRUG00000003783	sfpq	62	76.092	Takifugu_rubripes
ENSCCAG00000029361	-	80	64.634	ENSTNIG00000011331	sfpq	72	76.027	Tetraodon_nigroviridis
ENSCCAG00000029361	-	69	86.431	ENSTBEG00000006238	SFPQ	66	71.577	Tupaia_belangeri
ENSCCAG00000029361	-	68	95.248	ENSTTRG00000013930	SFPQ	68	94.628	Tursiops_truncatus
ENSCCAG00000029361	-	77	97.097	ENSUAMG00000026758	SFPQ	100	97.143	Ursus_americanus
ENSCCAG00000029361	-	50	97.151	ENSUMAG00000008056	-	100	97.151	Ursus_maritimus
ENSCCAG00000029361	-	63	89.865	ENSVPAG00000006960	-	67	89.865	Vicugna_pacos
ENSCCAG00000029361	-	50	88.889	ENSVVUG00000000874	-	100	88.889	Vulpes_vulpes
ENSCCAG00000029361	-	64	80.172	ENSXETG00000009682	sfpq	100	85.139	Xenopus_tropicalis