EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000029372 (Gene tree)
Gene ID: 108289967
Gene Symbol: GAR1
Alias: NOLA1
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 8982 bases
Position: chrKV389443.1:3518992-3527973
Accession: 108289967
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000023165	Gar1	PF04410.14	1.3e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000040666	GAR1-201	1183	XM_017509663	ENSCCAP00000023165	218 (aa)	XP_017365152	A0A2K5R4W7

Gene Model

Click here to download ENSCCAG00000029372's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000029372's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000029372	GAR1	100	99.083	ENSG00000109534	GAR1	100	99.083	Homo_sapiens
ENSCCAG00000029372	GAR1	67	86.897	ENSAPOG00000019754	gar1	50	94.393	Acanthochromis_polyacanthus
ENSCCAG00000029372	GAR1	50	98.165	ENSAMEG00000004605	GAR1	53	98.165	Ailuropoda_melanoleuca
ENSCCAG00000029372	GAR1	100	100.000	ENSANAG00000021608	GAR1	100	100.000	Aotus_nancymaae
ENSCCAG00000029372	GAR1	50	99.083	ENSBTAG00000000748	GAR1	52	99.083	Bos_taurus
ENSCCAG00000029372	GAR1	64	54.286	WBGene00022046	Y66H1A.4	64	50.000	Caenorhabditis_elegans
ENSCCAG00000029372	GAR1	100	99.541	ENSCJAG00000004041	GAR1	100	99.541	Callithrix_jacchus
ENSCCAG00000029372	GAR1	99	90.741	ENSCHIG00000016026	-	52	99.083	Capra_hircus
ENSCCAG00000029372	GAR1	50	100.000	ENSTSYG00000013668	-	51	100.000	Carlito_syrichta
ENSCCAG00000029372	GAR1	50	91.743	ENSTSYG00000026632	-	56	91.743	Carlito_syrichta
ENSCCAG00000029372	GAR1	50	99.091	ENSCPOG00000004216	GAR1	50	99.083	Cavia_porcellus
ENSCCAG00000029372	GAR1	100	98.624	ENSCATG00000021854	GAR1	100	98.624	Cercocebus_atys
ENSCCAG00000029372	GAR1	50	97.273	ENSCLAG00000005335	GAR1	99	94.937	Chinchilla_lanigera
ENSCCAG00000029372	GAR1	89	97.436	ENSCSAG00000003922	GAR1	98	97.436	Chlorocebus_sabaeus
ENSCCAG00000029372	GAR1	53	99.138	ENSCHOG00000007484	-	51	99.138	Choloepus_hoffmanni
ENSCCAG00000029372	GAR1	100	97.706	ENSCANG00000039262	GAR1	100	97.706	Colobus_angolensis_palliatus
ENSCCAG00000029372	GAR1	50	99.083	ENSDNOG00000037632	GAR1	55	99.083	Dasypus_novemcinctus
ENSCCAG00000029372	GAR1	66	92.361	ENSDORG00000000482	Gar1	50	96.330	Dipodomys_ordii
ENSCCAG00000029372	GAR1	50	98.182	ENSEASG00005004658	GAR1	50	98.165	Equus_asinus_asinus
ENSCCAG00000029372	GAR1	50	99.091	ENSECAG00000013624	GAR1	55	99.083	Equus_caballus
ENSCCAG00000029372	GAR1	59	60.000	ENSFCAG00000025841	-	57	63.866	Felis_catus
ENSCCAG00000029372	GAR1	100	92.273	ENSFCAG00000040791	-	52	99.083	Felis_catus
ENSCCAG00000029372	GAR1	51	91.892	ENSFHEG00000008068	gar1	50	93.458	Fundulus_heteroclitus
ENSCCAG00000029372	GAR1	51	80.180	ENSGGOG00000036205	-	54	80.734	Gorilla_gorilla
ENSCCAG00000029372	GAR1	100	98.624	ENSGGOG00000008681	GAR1	100	98.624	Gorilla_gorilla
ENSCCAG00000029372	GAR1	50	90.000	ENSIPUG00000003194	gar1	51	91.589	Ictalurus_punctatus
ENSCCAG00000029372	GAR1	50	97.248	ENSSTOG00000005577	GAR1	71	96.364	Ictidomys_tridecemlineatus
ENSCCAG00000029372	GAR1	51	89.189	ENSKMAG00000010402	gar1	51	91.589	Kryptolebias_marmoratus
ENSCCAG00000029372	GAR1	79	84.298	ENSLACG00000003306	GAR1	65	87.037	Latimeria_chalumnae
ENSCCAG00000029372	GAR1	50	84.259	ENSMFAG00000003572	-	53	83.486	Macaca_fascicularis
ENSCCAG00000029372	GAR1	100	98.624	ENSMFAG00000024592	GAR1	100	98.624	Macaca_fascicularis
ENSCCAG00000029372	GAR1	100	98.624	ENSMMUG00000021225	GAR1	100	98.624	Macaca_mulatta
ENSCCAG00000029372	GAR1	100	98.624	ENSMNEG00000042594	GAR1	100	98.624	Macaca_nemestrina
ENSCCAG00000029372	GAR1	99	98.148	ENSMLEG00000002496	GAR1	99	98.148	Mandrillus_leucophaeus
ENSCCAG00000029372	GAR1	50	96.330	ENSMAUG00000016788	Gar1	70	98.182	Mesocricetus_auratus
ENSCCAG00000029372	GAR1	51	98.214	ENSMICG00000003326	GAR1	50	99.083	Microcebus_murinus
ENSCCAG00000029372	GAR1	50	95.413	ENSMOCG00000001340	Gar1	70	100.000	Microtus_ochrogaster
ENSCCAG00000029372	GAR1	69	74.667	ENSMALG00000009672	gar1	50	93.458	Monopterus_albus
ENSCCAG00000029372	GAR1	50	96.330	MGP_CAROLIEiJ_G0025627	Gar1	70	100.000	Mus_caroli
ENSCCAG00000029372	GAR1	59	87.500	ENSMUSG00000028010	Gar1	70	100.000	Mus_musculus
ENSCCAG00000029372	GAR1	88	92.746	MGP_PahariEiJ_G0027076	Gar1	100	94.681	Mus_pahari
ENSCCAG00000029372	GAR1	59	87.500	MGP_SPRETEiJ_G0026580	Gar1	70	100.000	Mus_spretus
ENSCCAG00000029372	GAR1	100	92.727	ENSMPUG00000008615	GAR1	52	99.083	Mustela_putorius_furo
ENSCCAG00000029372	GAR1	100	94.196	ENSMLUG00000003776	GAR1	100	94.196	Myotis_lucifugus
ENSCCAG00000029372	GAR1	50	98.182	ENSNGAG00000008268	Gar1	92	98.592	Nannospalax_galili
ENSCCAG00000029372	GAR1	100	97.248	ENSNLEG00000016578	GAR1	100	97.248	Nomascus_leucogenys
ENSCCAG00000029372	GAR1	51	83.784	ENSNLEG00000034282	-	55	83.486	Nomascus_leucogenys
ENSCCAG00000029372	GAR1	50	99.083	ENSOCUG00000003901	GAR1	51	99.083	Oryctolagus_cuniculus
ENSCCAG00000029372	GAR1	69	82.667	ENSORLG00000020583	gar1	62	89.706	Oryzias_latipes
ENSCCAG00000029372	GAR1	69	82.667	ENSORLG00020008602	gar1	62	89.706	Oryzias_latipes_hni
ENSCCAG00000029372	GAR1	69	82.667	ENSORLG00015017643	gar1	62	89.706	Oryzias_latipes_hsok
ENSCCAG00000029372	GAR1	69	82.667	ENSOMEG00000007911	GAR1	50	89.706	Oryzias_melastigma
ENSCCAG00000029372	GAR1	100	95.434	ENSOGAG00000004693	GAR1	51	99.083	Otolemur_garnettii
ENSCCAG00000029372	GAR1	50	99.083	ENSOARG00000004910	GAR1	52	99.083	Ovis_aries
ENSCCAG00000029372	GAR1	100	98.630	ENSPPAG00000014081	GAR1	100	98.630	Pan_paniscus
ENSCCAG00000029372	GAR1	100	92.727	ENSPPRG00000023697	GAR1	52	99.083	Panthera_pardus
ENSCCAG00000029372	GAR1	100	92.727	ENSPTIG00000021565	GAR1	52	99.083	Panthera_tigris_altaica
ENSCCAG00000029372	GAR1	77	66.667	ENSPTRG00000049340	-	70	76.027	Pan_troglodytes
ENSCCAG00000029372	GAR1	100	98.624	ENSPTRG00000016364	GAR1	100	98.624	Pan_troglodytes
ENSCCAG00000029372	GAR1	100	98.624	ENSPANG00000000639	GAR1	100	98.624	Papio_anubis
ENSCCAG00000029372	GAR1	50	96.330	ENSPEMG00000015838	Gar1	70	98.182	Peromyscus_maniculatus_bairdii
ENSCCAG00000029372	GAR1	50	92.593	ENSPCIG00000018912	GAR1	57	86.029	Phascolarctos_cinereus
ENSCCAG00000029372	GAR1	100	98.624	ENSPPYG00000014996	GAR1	100	98.624	Pongo_abelii
ENSCCAG00000029372	GAR1	78	95.906	ENSRNOG00000061146	Gar1	100	95.906	Rattus_norvegicus
ENSCCAG00000029372	GAR1	100	98.165	ENSRBIG00000019547	GAR1	100	98.165	Rhinopithecus_bieti
ENSCCAG00000029372	GAR1	51	82.143	ENSRBIG00000042411	-	53	81.651	Rhinopithecus_bieti
ENSCCAG00000029372	GAR1	100	98.624	ENSRROG00000028454	GAR1	100	98.624	Rhinopithecus_roxellana
ENSCCAG00000029372	GAR1	51	82.143	ENSRROG00000044348	-	52	81.651	Rhinopithecus_roxellana
ENSCCAG00000029372	GAR1	100	96.818	ENSSBOG00000024785	GAR1	100	96.818	Saimiri_boliviensis_boliviensis
ENSCCAG00000029372	GAR1	77	88.690	ENSSSCG00000009137	GAR1	54	99.083	Sus_scrofa
ENSCCAG00000029372	GAR1	86	93.651	ENSUAMG00000005652	GAR1	94	93.651	Ursus_americanus
ENSCCAG00000029372	GAR1	100	92.273	ENSUMAG00000000776	GAR1	100	92.273	Ursus_maritimus
ENSCCAG00000029372	GAR1	100	92.727	ENSVVUG00000017612	GAR1	100	92.727	Vulpes_vulpes