EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000029378 (Gene tree)
Gene ID: 108307940
Gene Symbol: -
Alias: -
Full Name: RNA polymerase II subunit J
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 5400 bases
Position: chrKV389508.1:1890237-1895636
Accession: 108307940
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000023183	RNA_pol_L_2	PF13656.6	4.2e-29	1	1
ENSCCAP00000023212	RNA_pol_L_2	PF13656.6	6.5e-29	1	1
ENSCCAP00000023201	RNA_pol_L_2	PF13656.6	1.4e-28	1	1
ENSCCAP00000023191	RNA_pol_L_2	PF13656.6	3.2e-18	1	1
ENSCCAP00000023183	RNA_pol_L	PF01193.24	4.6e-10	1	1
ENSCCAP00000023212	RNA_pol_L	PF01193.24	7e-10	1	1
ENSCCAP00000023201	RNA_pol_L	PF01193.24	1.4e-09	1	1
ENSCCAP00000023191	RNA_pol_L	PF01193.24	0.00029	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000040702	-	558	-	ENSCCAP00000023201	185 (aa)	-	A0A2K5R4Y1
ENSCCAT00000040713	-	405	-	ENSCCAP00000023212	135 (aa)	-	A0A2K5R4Z8
ENSCCAT00000040717	-	204	-	ENSCCAP00000023217	68 (aa)	-	A0A2K5R504
ENSCCAT00000040692	-	264	-	ENSCCAP00000023191	87 (aa)	-	A0A2K5R4X1
ENSCCAT00000040684	-	588	XM_017533505	ENSCCAP00000023183	117 (aa)	XP_017388994	A0A2K5R4W9

Gene Model

Click here to download ENSCCAG00000029378's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000029378's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000029378	-	85	32.039	ENSCCAG00000021349	-	77	32.039

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000029378	-	100	100.000	ENSANAG00000020385	-	100	100.000	Aotus_nancymaae
ENSCCAG00000029378	-	100	100.000	ENSBTAG00000005446	POLR2J	100	100.000	Bos_taurus
ENSCCAG00000029378	-	100	100.000	ENSCAFG00020013154	-	100	100.000	Canis_lupus_dingo
ENSCCAG00000029378	-	100	100.000	ENSCHIG00000009008	-	100	100.000	Capra_hircus
ENSCCAG00000029378	-	96	91.964	ENSCAPG00000013625	-	96	91.964	Cavia_aperea
ENSCCAG00000029378	-	68	100.000	ENSCHOG00000008325	-	99	67.890	Choloepus_hoffmanni
ENSCCAG00000029378	-	85	99.000	ENSCPBG00000027774	-	84	99.000	Chrysemys_picta_bellii
ENSCCAG00000029378	-	100	100.000	ENSECAG00000022750	-	100	100.000	Equus_caballus
ENSCCAG00000029378	-	79	85.915	ENSGGOG00000003934	-	84	85.915	Gorilla_gorilla
ENSCCAG00000029378	-	94	76.829	ENSGGOG00000043186	-	86	76.829	Gorilla_gorilla
ENSCCAG00000029378	-	77	97.778	ENSGGOG00000038950	-	76	80.303	Gorilla_gorilla
ENSCCAG00000029378	-	69	95.000	ENSLACG00000022567	-	60	92.063	Latimeria_chalumnae
ENSCCAG00000029378	-	100	100.000	ENSMFAG00000039168	-	100	100.000	Macaca_fascicularis
ENSCCAG00000029378	-	100	100.000	ENSMLEG00000033262	-	100	100.000	Mandrillus_leucophaeus
ENSCCAG00000029378	-	100	100.000	ENSMICG00000010323	-	100	100.000	Microcebus_murinus
ENSCCAG00000029378	-	97	76.190	ENSPTRG00000028611	-	60	95.522	Pan_troglodytes
ENSCCAG00000029378	-	100	100.000	ENSPTRG00000019132	-	100	100.000	Pan_troglodytes
ENSCCAG00000029378	-	69	85.000	ENSPTRG00000052689	-	87	62.879	Pan_troglodytes
ENSCCAG00000029378	-	89	87.013	ENSPTRG00000050290	-	87	87.013	Pan_troglodytes
ENSCCAG00000029378	-	100	100.000	ENSPANG00000015179	-	100	100.000	Papio_anubis
ENSCCAG00000029378	-	100	96.581	ENSPKIG00000013014	-	100	96.581	Paramormyrops_kingsleyae
ENSCCAG00000029378	-	92	99.074	ENSPCAG00000003269	-	83	81.944	Procavia_capensis
ENSCCAG00000029378	-	100	100.000	ENSRBIG00000042413	-	100	100.000	Rhinopithecus_bieti
ENSCCAG00000029378	-	100	100.000	ENSRROG00000035578	-	100	100.000	Rhinopithecus_roxellana
ENSCCAG00000029378	-	76	100.000	ENSTTRG00000014846	-	93	77.863	Tursiops_truncatus
ENSCCAG00000029378	-	91	73.832	ENSVPAG00000007077	-	79	64.493	Vicugna_pacos
ENSCCAG00000029378	-	100	100.000	ENSVVUG00000023727	-	100	100.000	Vulpes_vulpes