EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000029389 (Gene tree)
Gene ID: 108303686
Gene Symbol: -
Alias: -
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 46277 bases
Position: chrKV389476.1:1959530-2005806
Accession: 108303686
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000023211	MRP-S27	PF10037.9	6.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000040732	-	651	XM_017527610	ENSCCAP00000023231	216 (aa)	XP_017383099	A0A2K5R510
ENSCCAT00000040712	-	2956	XM_017527606	ENSCCAP00000023211	388 (aa)	XP_017383095	A0A2K5R4Z1
ENSCCAT00000040727	-	840	-	ENSCCAP00000023226	279 (aa)	-	A0A2K5R505

Gene Model

Click here to download ENSCCAG00000029389's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000029389's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000029389	-	81	90.415	ENSCCAG00000021996	-	98	87.774

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000029389	-	100	87.113	ENSG00000049883	PTCD2	100	87.113	Homo_sapiens
ENSCCAG00000029389	-	90	47.126	ENSAPOG00000020682	ptcd2	91	47.126	Acanthochromis_polyacanthus
ENSCCAG00000029389	-	99	78.442	ENSAMEG00000007194	PTCD2	99	78.442	Ailuropoda_melanoleuca
ENSCCAG00000029389	-	89	41.547	ENSACIG00000002053	ptcd2	100	41.547	Amphilophus_citrinellus
ENSCCAG00000029389	-	90	46.552	ENSAOCG00000006616	ptcd2	89	46.552	Amphiprion_ocellaris
ENSCCAG00000029389	-	90	46.552	ENSAPEG00000022926	ptcd2	89	46.552	Amphiprion_percula
ENSCCAG00000029389	-	99	55.297	ENSACAG00000009747	PTCD2	97	55.297	Anolis_carolinensis
ENSCCAG00000029389	-	100	95.619	ENSANAG00000029353	PTCD2	100	95.619	Aotus_nancymaae
ENSCCAG00000029389	-	97	42.706	ENSACLG00000027742	ptcd2	94	42.706	Astatotilapia_calliptera
ENSCCAG00000029389	-	88	43.275	ENSAMXG00000029404	ptcd2	89	43.275	Astyanax_mexicanus
ENSCCAG00000029389	-	99	81.250	ENSBTAG00000014675	PTCD2	100	81.250	Bos_taurus
ENSCCAG00000029389	-	100	95.103	ENSCJAG00000016364	PTCD2	100	95.103	Callithrix_jacchus
ENSCCAG00000029389	-	99	77.461	ENSCAFG00000007982	PTCD2	90	77.461	Canis_familiaris
ENSCCAG00000029389	-	89	79.480	ENSCAFG00020019147	PTCD2	97	79.480	Canis_lupus_dingo
ENSCCAG00000029389	-	99	81.771	ENSCHIG00000017118	PTCD2	100	81.771	Capra_hircus
ENSCCAG00000029389	-	99	74.674	ENSCPOG00000040168	PTCD2	100	74.674	Cavia_porcellus
ENSCCAG00000029389	-	99	85.640	ENSCATG00000019069	PTCD2	100	85.640	Cercocebus_atys
ENSCCAG00000029389	-	99	73.890	ENSCLAG00000000072	PTCD2	100	73.890	Chinchilla_lanigera
ENSCCAG00000029389	-	99	88.251	ENSCSAG00000015623	PTCD2	100	88.251	Chlorocebus_sabaeus
ENSCCAG00000029389	-	73	76.471	ENSCHOG00000010634	PTCD2	82	76.471	Choloepus_hoffmanni
ENSCCAG00000029389	-	100	54.872	ENSCPBG00000000216	PTCD2	100	54.872	Chrysemys_picta_bellii
ENSCCAG00000029389	-	100	85.825	ENSCANG00000035636	PTCD2	100	85.825	Colobus_angolensis_palliatus
ENSCCAG00000029389	-	99	73.057	ENSCGRG00001015289	Ptcd2	84	73.057	Cricetulus_griseus_chok1gshd
ENSCCAG00000029389	-	99	73.057	ENSCGRG00000006193	Ptcd2	84	73.057	Cricetulus_griseus_crigri
ENSCCAG00000029389	-	90	44.540	ENSCVAG00000001285	ptcd2	89	44.540	Cyprinodon_variegatus
ENSCCAG00000029389	-	93	45.152	ENSDARG00000035391	ptcd2	94	45.152	Danio_rerio
ENSCCAG00000029389	-	99	75.979	ENSDNOG00000008719	PTCD2	100	75.979	Dasypus_novemcinctus
ENSCCAG00000029389	-	99	76.227	ENSDORG00000004921	Ptcd2	100	76.227	Dipodomys_ordii
ENSCCAG00000029389	-	99	67.784	ENSETEG00000016542	PTCD2	99	67.784	Echinops_telfairi
ENSCCAG00000029389	-	99	79.112	ENSEASG00005018038	PTCD2	100	79.112	Equus_asinus_asinus
ENSCCAG00000029389	-	100	77.835	ENSECAG00000007022	PTCD2	100	77.835	Equus_caballus
ENSCCAG00000029389	-	99	72.539	ENSEEUG00000014031	PTCD2	99	72.539	Erinaceus_europaeus
ENSCCAG00000029389	-	98	48.168	ENSELUG00000003584	ptcd2	99	48.168	Esox_lucius
ENSCCAG00000029389	-	99	72.351	ENSFCAG00000045432	PTCD2	83	72.351	Felis_catus
ENSCCAG00000029389	-	84	51.682	ENSFALG00000010299	PTCD2	99	51.682	Ficedula_albicollis
ENSCCAG00000029389	-	99	75.718	ENSFDAG00000018461	PTCD2	100	75.718	Fukomys_damarensis
ENSCCAG00000029389	-	90	48.148	ENSGMOG00000003637	ptcd2	91	48.148	Gadus_morhua
ENSCCAG00000029389	-	91	49.435	ENSGALG00000038260	PTCD2	93	49.435	Gallus_gallus
ENSCCAG00000029389	-	100	57.949	ENSGAGG00000021952	PTCD2	100	57.949	Gopherus_agassizii
ENSCCAG00000029389	-	100	87.371	ENSGGOG00000010695	PTCD2	100	87.371	Gorilla_gorilla
ENSCCAG00000029389	-	97	42.706	ENSHBUG00000009191	ptcd2	94	42.706	Haplochromis_burtoni
ENSCCAG00000029389	-	99	75.196	ENSHGLG00000001234	PTCD2	100	75.196	Heterocephalus_glaber_female
ENSCCAG00000029389	-	99	75.196	ENSHGLG00100015419	PTCD2	100	75.196	Heterocephalus_glaber_male
ENSCCAG00000029389	-	97	45.093	ENSHCOG00000001703	ptcd2	95	45.093	Hippocampus_comes
ENSCCAG00000029389	-	84	44.343	ENSIPUG00000006080	ptcd2	91	44.126	Ictalurus_punctatus
ENSCCAG00000029389	-	98	78.796	ENSSTOG00000006596	PTCD2	99	78.796	Ictidomys_tridecemlineatus
ENSCCAG00000029389	-	99	77.023	ENSJJAG00000024388	Ptcd2	100	77.023	Jaculus_jaculus
ENSCCAG00000029389	-	97	39.733	ENSKMAG00000009329	ptcd2	97	39.733	Kryptolebias_marmoratus
ENSCCAG00000029389	-	97	44.000	ENSLBEG00000024871	ptcd2	92	44.000	Labrus_bergylta
ENSCCAG00000029389	-	93	54.167	ENSLOCG00000011122	ptcd2	94	54.167	Lepisosteus_oculatus
ENSCCAG00000029389	-	80	79.100	ENSLAFG00000004115	PTCD2	100	79.100	Loxodonta_africana
ENSCCAG00000029389	-	100	86.340	ENSMFAG00000031516	PTCD2	100	86.340	Macaca_fascicularis
ENSCCAG00000029389	-	99	86.162	ENSMNEG00000007537	PTCD2	100	86.162	Macaca_nemestrina
ENSCCAG00000029389	-	100	85.825	ENSMLEG00000031093	PTCD2	100	85.825	Mandrillus_leucophaeus
ENSCCAG00000029389	-	90	47.989	ENSMAMG00000018529	ptcd2	91	47.989	Mastacembelus_armatus
ENSCCAG00000029389	-	97	42.706	ENSMZEG00005003625	ptcd2	94	42.706	Maylandia_zebra
ENSCCAG00000029389	-	90	50.287	ENSMGAG00000005033	PTCD2	100	50.287	Meleagris_gallopavo
ENSCCAG00000029389	-	99	57.702	ENSMAUG00000020253	Ptcd2	100	57.702	Mesocricetus_auratus
ENSCCAG00000029389	-	99	80.362	ENSMICG00000004535	PTCD2	99	80.362	Microcebus_murinus
ENSCCAG00000029389	-	99	73.368	ENSMOCG00000019985	Ptcd2	100	73.368	Microtus_ochrogaster
ENSCCAG00000029389	-	99	57.031	ENSMODG00000001695	PTCD2	100	57.031	Monodelphis_domestica
ENSCCAG00000029389	-	90	48.563	ENSMALG00000022372	ptcd2	91	48.563	Monopterus_albus
ENSCCAG00000029389	-	99	71.540	MGP_CAROLIEiJ_G0018829	Ptcd2	100	71.540	Mus_caroli
ENSCCAG00000029389	-	99	70.466	ENSMUSG00000021650	Ptcd2	100	70.466	Mus_musculus
ENSCCAG00000029389	-	99	74.151	MGP_PahariEiJ_G0015904	Ptcd2	100	74.151	Mus_pahari
ENSCCAG00000029389	-	99	71.540	MGP_SPRETEiJ_G0019711	Ptcd2	100	71.540	Mus_spretus
ENSCCAG00000029389	-	99	80.679	ENSMPUG00000014401	PTCD2	100	80.679	Mustela_putorius_furo
ENSCCAG00000029389	-	99	77.979	ENSMLUG00000007374	PTCD2	99	77.979	Myotis_lucifugus
ENSCCAG00000029389	-	99	72.585	ENSNGAG00000005027	Ptcd2	100	72.585	Nannospalax_galili
ENSCCAG00000029389	-	97	42.971	ENSNBRG00000008174	ptcd2	96	42.971	Neolamprologus_brichardi
ENSCCAG00000029389	-	85	43.636	ENSNBRG00000000092	-	100	43.636	Neolamprologus_brichardi
ENSCCAG00000029389	-	100	87.113	ENSNLEG00000004516	PTCD2	100	87.113	Nomascus_leucogenys
ENSCCAG00000029389	-	81	52.716	ENSMEUG00000014012	-	82	52.716	Notamacropus_eugenii
ENSCCAG00000029389	-	99	72.610	ENSOPRG00000007290	PTCD2	99	72.610	Ochotona_princeps
ENSCCAG00000029389	-	99	77.285	ENSODEG00000016417	PTCD2	100	77.285	Octodon_degus
ENSCCAG00000029389	-	82	44.025	ENSONIG00000011269	ptcd2	90	44.025	Oreochromis_niloticus
ENSCCAG00000029389	-	94	78.630	ENSOCUG00000007970	PTCD2	100	77.285	Oryctolagus_cuniculus
ENSCCAG00000029389	-	89	46.991	ENSORLG00000003851	ptcd2	88	46.821	Oryzias_latipes
ENSCCAG00000029389	-	89	46.132	ENSORLG00020009823	ptcd2	90	45.954	Oryzias_latipes_hni
ENSCCAG00000029389	-	89	46.132	ENSORLG00015016777	ptcd2	99	46.686	Oryzias_latipes_hsok
ENSCCAG00000029389	-	89	44.509	ENSOMEG00000012396	ptcd2	84	44.509	Oryzias_melastigma
ENSCCAG00000029389	-	99	74.160	ENSOGAG00000008390	PTCD2	99	74.160	Otolemur_garnettii
ENSCCAG00000029389	-	99	81.137	ENSOARG00000005087	PTCD2	99	81.137	Ovis_aries
ENSCCAG00000029389	-	100	87.113	ENSPPAG00000028480	PTCD2	100	87.113	Pan_paniscus
ENSCCAG00000029389	-	100	87.113	ENSPTRG00000016968	PTCD2	100	87.113	Pan_troglodytes
ENSCCAG00000029389	-	89	87.246	ENSPANG00000006611	PTCD2	89	87.246	Papio_anubis
ENSCCAG00000029389	-	91	47.472	ENSPKIG00000019896	ptcd2	93	47.472	Paramormyrops_kingsleyae
ENSCCAG00000029389	-	82	59.306	ENSPSIG00000014559	PTCD2	98	59.306	Pelodiscus_sinensis
ENSCCAG00000029389	-	99	74.026	ENSPEMG00000000884	Ptcd2	100	74.026	Peromyscus_maniculatus_bairdii
ENSCCAG00000029389	-	99	59.115	ENSPCIG00000029047	PTCD2	100	59.115	Phascolarctos_cinereus
ENSCCAG00000029389	-	90	43.678	ENSPLAG00000010456	ptcd2	91	43.678	Poecilia_latipinna
ENSCCAG00000029389	-	90	43.678	ENSPREG00000021797	ptcd2	88	43.678	Poecilia_reticulata
ENSCCAG00000029389	-	99	76.486	ENSPPYG00000015543	PTCD2	99	76.486	Pongo_abelii
ENSCCAG00000029389	-	80	66.346	ENSPCAG00000006806	PTCD2	99	66.346	Procavia_capensis
ENSCCAG00000029389	-	99	76.943	ENSPVAG00000010935	PTCD2	99	76.943	Pteropus_vampyrus
ENSCCAG00000029389	-	97	42.706	ENSPNYG00000003122	ptcd2	94	42.706	Pundamilia_nyererei
ENSCCAG00000029389	-	93	47.790	ENSPNAG00000021490	ptcd2	94	47.790	Pygocentrus_nattereri
ENSCCAG00000029389	-	99	72.324	ENSRNOG00000028403	Ptcd2	100	72.324	Rattus_norvegicus
ENSCCAG00000029389	-	100	80.670	ENSRBIG00000032929	PTCD2	100	80.670	Rhinopithecus_bieti
ENSCCAG00000029389	-	99	86.423	ENSRROG00000000080	PTCD2	100	86.423	Rhinopithecus_roxellana
ENSCCAG00000029389	-	99	91.906	ENSSBOG00000018911	PTCD2	100	91.906	Saimiri_boliviensis_boliviensis
ENSCCAG00000029389	-	99	60.417	ENSSHAG00000003833	PTCD2	99	60.417	Sarcophilus_harrisii
ENSCCAG00000029389	-	86	45.946	ENSSFOG00015015415	ptcd2	86	45.946	Scleropages_formosus
ENSCCAG00000029389	-	89	43.228	ENSSMAG00000010350	ptcd2	90	43.228	Scophthalmus_maximus
ENSCCAG00000029389	-	97	45.889	ENSSDUG00000008142	ptcd2	91	45.889	Seriola_dumerili
ENSCCAG00000029389	-	97	46.154	ENSSLDG00000015284	ptcd2	96	46.154	Seriola_lalandi_dorsalis
ENSCCAG00000029389	-	80	70.550	ENSSARG00000004983	PTCD2	99	70.550	Sorex_araneus
ENSCCAG00000029389	-	99	51.697	ENSSPUG00000000176	PTCD2	96	51.697	Sphenodon_punctatus
ENSCCAG00000029389	-	97	44.297	ENSSPAG00000008591	ptcd2	96	44.297	Stegastes_partitus
ENSCCAG00000029389	-	99	82.338	ENSSSCG00000016975	PTCD2	90	82.338	Sus_scrofa
ENSCCAG00000029389	-	89	51.594	ENSTGUG00000005705	PTCD2	99	51.594	Taeniopygia_guttata
ENSCCAG00000029389	-	99	76.227	ENSTBEG00000016559	PTCD2	99	76.425	Tupaia_belangeri
ENSCCAG00000029389	-	99	80.879	ENSTTRG00000011851	PTCD2	99	80.879	Tursiops_truncatus
ENSCCAG00000029389	-	99	78.701	ENSUAMG00000007583	PTCD2	90	78.701	Ursus_americanus
ENSCCAG00000029389	-	99	78.590	ENSUMAG00000007666	PTCD2	100	78.590	Ursus_maritimus
ENSCCAG00000029389	-	99	80.103	ENSVPAG00000009597	PTCD2	99	80.103	Vicugna_pacos
ENSCCAG00000029389	-	99	77.546	ENSVVUG00000007299	-	100	77.546	Vulpes_vulpes
ENSCCAG00000029389	-	93	50.970	ENSXETG00000031652	PTCD2	94	50.970	Xenopus_tropicalis
ENSCCAG00000029389	-	83	44.099	ENSXMAG00000005940	ptcd2	82	43.391	Xiphophorus_maculatus