EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000029460 (Gene tree)
Gene ID: 108314173
Gene Symbol: POLR1E
Alias: FLJ13390|FLJ13970|PAF53|PRAF1
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 15296 bases
Position: chrKV389575.1:3809135-3824430
Accession: 108314173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000023350	RNA_pol_I_A49	PF06870.12	7.3e-91	1	2
ENSCCAP00000023350	RNA_pol_I_A49	PF06870.12	7.3e-91	2	2
ENSCCAP00000023355	RNA_pol_I_A49	PF06870.12	5.6e-80	1	2
ENSCCAP00000023355	RNA_pol_I_A49	PF06870.12	5.6e-80	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000040852	POLR1E-201	1170	XM_017542930	ENSCCAP00000023350	389 (aa)	XP_017398419	A0A2K5R5F0
ENSCCAT00000040856	POLR1E-202	1323	-	ENSCCAP00000023355	440 (aa)	-	A0A2K5R5F5

Gene Model

Click here to download ENSCCAG00000029460's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000029460's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000029460	POLR1E	100	86.396	ENSG00000137054	POLR1E	100	86.396	Homo_sapiens
ENSCCAG00000029460	POLR1E	98	39.709	ENSAPOG00000012452	polr1e	99	39.709	Acanthochromis_polyacanthus
ENSCCAG00000029460	POLR1E	100	87.059	ENSAMEG00000010193	POLR1E	81	91.667	Ailuropoda_melanoleuca
ENSCCAG00000029460	POLR1E	93	40.591	ENSACIG00000009884	polr1e	98	40.591	Amphilophus_citrinellus
ENSCCAG00000029460	POLR1E	98	41.889	ENSAOCG00000005665	polr1e	99	41.889	Amphiprion_ocellaris
ENSCCAG00000029460	POLR1E	98	41.646	ENSAPEG00000020581	polr1e	99	41.646	Amphiprion_percula
ENSCCAG00000029460	POLR1E	98	42.857	ENSATEG00000020609	polr1e	99	42.857	Anabas_testudineus
ENSCCAG00000029460	POLR1E	79	60.256	ENSAPLG00000010340	POLR1E	82	60.256	Anas_platyrhynchos
ENSCCAG00000029460	POLR1E	100	90.692	ENSANAG00000038046	POLR1E	100	90.692	Aotus_nancymaae
ENSCCAG00000029460	POLR1E	99	40.573	ENSACLG00000013685	polr1e	99	40.573	Astatotilapia_calliptera
ENSCCAG00000029460	POLR1E	97	40.633	ENSAMXG00000018181	polr1e	98	40.633	Astyanax_mexicanus
ENSCCAG00000029460	POLR1E	100	78.998	ENSBTAG00000012243	POLR1E	100	78.998	Bos_taurus
ENSCCAG00000029460	POLR1E	94	82.741	ENSCJAG00000010512	POLR1E	93	88.503	Callithrix_jacchus
ENSCCAG00000029460	POLR1E	100	81.146	ENSCAFG00000002377	POLR1E	100	81.146	Canis_familiaris
ENSCCAG00000029460	POLR1E	100	80.907	ENSCAFG00020017851	POLR1E	100	80.907	Canis_lupus_dingo
ENSCCAG00000029460	POLR1E	100	78.520	ENSCHIG00000019479	POLR1E	100	78.520	Capra_hircus
ENSCCAG00000029460	POLR1E	100	78.520	ENSTSYG00000002075	POLR1E	100	78.520	Carlito_syrichta
ENSCCAG00000029460	POLR1E	74	83.624	ENSCAPG00000015653	POLR1E	99	83.624	Cavia_aperea
ENSCCAG00000029460	POLR1E	99	76.794	ENSCPOG00000009965	POLR1E	100	76.794	Cavia_porcellus
ENSCCAG00000029460	POLR1E	100	85.919	ENSCATG00000031732	POLR1E	100	85.919	Cercocebus_atys
ENSCCAG00000029460	POLR1E	86	79.235	ENSCLAG00000012701	POLR1E	96	79.235	Chinchilla_lanigera
ENSCCAG00000029460	POLR1E	100	85.442	ENSCSAG00000010782	POLR1E	100	85.442	Chlorocebus_sabaeus
ENSCCAG00000029460	POLR1E	94	70.812	ENSCHOG00000013024	POLR1E	81	78.246	Choloepus_hoffmanni
ENSCCAG00000029460	POLR1E	98	61.707	ENSCPBG00000006923	POLR1E	99	61.707	Chrysemys_picta_bellii
ENSCCAG00000029460	POLR1E	100	85.203	ENSCANG00000036112	POLR1E	100	85.203	Colobus_angolensis_palliatus
ENSCCAG00000029460	POLR1E	99	77.888	ENSCGRG00001006197	Polr1e	96	72.249	Cricetulus_griseus_chok1gshd
ENSCCAG00000029460	POLR1E	99	77.888	ENSCGRG00000006430	Polr1e	96	72.249	Cricetulus_griseus_crigri
ENSCCAG00000029460	POLR1E	97	40.049	ENSCSEG00000005121	polr1e	99	40.049	Cynoglossus_semilaevis
ENSCCAG00000029460	POLR1E	98	37.923	ENSCVAG00000019759	polr1e	99	38.164	Cyprinodon_variegatus
ENSCCAG00000029460	POLR1E	94	39.500	ENSDARG00000006434	polr1e	99	38.554	Danio_rerio
ENSCCAG00000029460	POLR1E	100	84.706	ENSDNOG00000010257	POLR1E	78	90.000	Dasypus_novemcinctus
ENSCCAG00000029460	POLR1E	84	72.905	ENSETEG00000018204	POLR1E	99	72.905	Echinops_telfairi
ENSCCAG00000029460	POLR1E	100	80.907	ENSEASG00005000675	POLR1E	100	80.907	Equus_asinus_asinus
ENSCCAG00000029460	POLR1E	100	81.146	ENSECAG00000014669	POLR1E	100	81.146	Equus_caballus
ENSCCAG00000029460	POLR1E	94	67.259	ENSEEUG00000011928	POLR1E	96	58.280	Erinaceus_europaeus
ENSCCAG00000029460	POLR1E	96	42.118	ENSELUG00000008150	polr1e	97	42.118	Esox_lucius
ENSCCAG00000029460	POLR1E	100	78.759	ENSFCAG00000013081	POLR1E	100	78.759	Felis_catus
ENSCCAG00000029460	POLR1E	93	54.847	ENSFALG00000012950	POLR1E	99	54.847	Ficedula_albicollis
ENSCCAG00000029460	POLR1E	99	76.555	ENSFDAG00000016917	POLR1E	100	76.555	Fukomys_damarensis
ENSCCAG00000029460	POLR1E	98	39.709	ENSFHEG00000009801	polr1e	99	39.709	Fundulus_heteroclitus
ENSCCAG00000029460	POLR1E	93	39.481	ENSGMOG00000003336	POLR1E	93	39.740	Gadus_morhua
ENSCCAG00000029460	POLR1E	98	56.068	ENSGALG00000005395	POLR1E	99	56.068	Gallus_gallus
ENSCCAG00000029460	POLR1E	98	39.320	ENSGAFG00000004850	polr1e	99	39.320	Gambusia_affinis
ENSCCAG00000029460	POLR1E	98	39.904	ENSGACG00000016087	polr1e	99	39.904	Gasterosteus_aculeatus
ENSCCAG00000029460	POLR1E	97	58.182	ENSGAGG00000001659	POLR1E	98	57.990	Gopherus_agassizii
ENSCCAG00000029460	POLR1E	100	86.158	ENSGGOG00000001882	POLR1E	100	86.158	Gorilla_gorilla
ENSCCAG00000029460	POLR1E	99	40.476	ENSHBUG00000002559	polr1e	99	40.476	Haplochromis_burtoni
ENSCCAG00000029460	POLR1E	99	78.230	ENSHGLG00000002036	POLR1E	100	78.230	Heterocephalus_glaber_female
ENSCCAG00000029460	POLR1E	99	77.990	ENSHGLG00100012784	POLR1E	100	77.990	Heterocephalus_glaber_male
ENSCCAG00000029460	POLR1E	98	40.244	ENSHCOG00000002774	polr1e	98	40.244	Hippocampus_comes
ENSCCAG00000029460	POLR1E	97	41.220	ENSIPUG00000003019	polr1e	98	41.220	Ictalurus_punctatus
ENSCCAG00000029460	POLR1E	100	77.566	ENSSTOG00000009810	POLR1E	100	77.566	Ictidomys_tridecemlineatus
ENSCCAG00000029460	POLR1E	99	75.060	ENSJJAG00000020731	Polr1e	96	75.060	Jaculus_jaculus
ENSCCAG00000029460	POLR1E	98	38.554	ENSKMAG00000000046	polr1e	99	38.554	Kryptolebias_marmoratus
ENSCCAG00000029460	POLR1E	99	41.007	ENSLBEG00000003104	polr1e	99	41.388	Labrus_bergylta
ENSCCAG00000029460	POLR1E	84	55.956	ENSLACG00000003416	POLR1E	99	55.956	Latimeria_chalumnae
ENSCCAG00000029460	POLR1E	99	45.585	ENSLOCG00000012859	polr1e	99	45.585	Lepisosteus_oculatus
ENSCCAG00000029460	POLR1E	100	89.412	ENSLAFG00000012831	POLR1E	99	79.952	Loxodonta_africana
ENSCCAG00000029460	POLR1E	100	86.158	ENSMFAG00000045465	POLR1E	100	76.093	Macaca_fascicularis
ENSCCAG00000029460	POLR1E	100	86.158	ENSMMUG00000017892	POLR1E	100	86.158	Macaca_mulatta
ENSCCAG00000029460	POLR1E	100	84.309	ENSMNEG00000040283	POLR1E	100	84.309	Macaca_nemestrina
ENSCCAG00000029460	POLR1E	100	85.919	ENSMLEG00000031135	POLR1E	100	85.919	Mandrillus_leucophaeus
ENSCCAG00000029460	POLR1E	99	39.524	ENSMAMG00000001260	polr1e	99	39.524	Mastacembelus_armatus
ENSCCAG00000029460	POLR1E	99	40.811	ENSMZEG00005021536	polr1e	99	40.811	Maylandia_zebra
ENSCCAG00000029460	POLR1E	100	71.838	ENSMAUG00000021044	Polr1e	97	71.838	Mesocricetus_auratus
ENSCCAG00000029460	POLR1E	100	81.384	ENSMICG00000003673	POLR1E	100	81.384	Microcebus_murinus
ENSCCAG00000029460	POLR1E	99	77.647	ENSMOCG00000012920	Polr1e	96	72.488	Microtus_ochrogaster
ENSCCAG00000029460	POLR1E	93	40.909	ENSMMOG00000007391	polr1e	99	38.142	Mola_mola
ENSCCAG00000029460	POLR1E	94	67.424	ENSMODG00000002884	POLR1E	97	67.424	Monodelphis_domestica
ENSCCAG00000029460	POLR1E	99	40.141	ENSMALG00000002665	polr1e	99	40.141	Monopterus_albus
ENSCCAG00000029460	POLR1E	97	76.190	MGP_CAROLIEiJ_G0025967	Polr1e	97	69.898	Mus_caroli
ENSCCAG00000029460	POLR1E	99	75.248	ENSMUSG00000028318	Polr1e	97	70.229	Mus_musculus
ENSCCAG00000029460	POLR1E	99	77.558	MGP_PahariEiJ_G0024114	Polr1e	97	71.756	Mus_pahari
ENSCCAG00000029460	POLR1E	99	74.587	MGP_SPRETEiJ_G0026930	Polr1e	97	69.466	Mus_spretus
ENSCCAG00000029460	POLR1E	100	87.059	ENSMPUG00000006040	POLR1E	89	87.059	Mustela_putorius_furo
ENSCCAG00000029460	POLR1E	100	78.282	ENSMLUG00000012688	POLR1E	97	78.282	Myotis_lucifugus
ENSCCAG00000029460	POLR1E	99	75.120	ENSNGAG00000002520	Polr1e	96	75.120	Nannospalax_galili
ENSCCAG00000029460	POLR1E	99	41.050	ENSNBRG00000016822	polr1e	97	41.505	Neolamprologus_brichardi
ENSCCAG00000029460	POLR1E	100	86.874	ENSNLEG00000003616	POLR1E	100	86.874	Nomascus_leucogenys
ENSCCAG00000029460	POLR1E	70	80.000	ENSMEUG00000015372	-	80	80.000	Notamacropus_eugenii
ENSCCAG00000029460	POLR1E	85	71.309	ENSOPRG00000014206	POLR1E	100	71.309	Ochotona_princeps
ENSCCAG00000029460	POLR1E	99	77.751	ENSODEG00000014565	POLR1E	97	77.751	Octodon_degus
ENSCCAG00000029460	POLR1E	99	40.811	ENSONIG00000008921	polr1e	99	40.811	Oreochromis_niloticus
ENSCCAG00000029460	POLR1E	100	74.224	ENSOCUG00000024773	POLR1E	100	74.224	Oryctolagus_cuniculus
ENSCCAG00000029460	POLR1E	98	40.194	ENSORLG00000005143	polr1e	99	40.194	Oryzias_latipes
ENSCCAG00000029460	POLR1E	93	39.840	ENSORLG00020007271	polr1e	99	39.840	Oryzias_latipes_hni
ENSCCAG00000029460	POLR1E	98	40.194	ENSORLG00015000137	polr1e	99	40.194	Oryzias_latipes_hsok
ENSCCAG00000029460	POLR1E	98	38.983	ENSOMEG00000013264	polr1e	97	38.983	Oryzias_melastigma
ENSCCAG00000029460	POLR1E	100	80.430	ENSOGAG00000012981	POLR1E	98	80.430	Otolemur_garnettii
ENSCCAG00000029460	POLR1E	100	78.043	ENSOARG00000011465	POLR1E	97	78.043	Ovis_aries
ENSCCAG00000029460	POLR1E	100	86.635	ENSPPAG00000034566	POLR1E	100	86.635	Pan_paniscus
ENSCCAG00000029460	POLR1E	100	78.759	ENSPPRG00000005649	POLR1E	100	78.759	Panthera_pardus
ENSCCAG00000029460	POLR1E	100	78.759	ENSPTIG00000009774	POLR1E	100	78.759	Panthera_tigris_altaica
ENSCCAG00000029460	POLR1E	100	86.635	ENSPTRG00000020944	POLR1E	100	86.635	Pan_troglodytes
ENSCCAG00000029460	POLR1E	100	86.158	ENSPANG00000025563	POLR1E	100	86.158	Papio_anubis
ENSCCAG00000029460	POLR1E	98	42.344	ENSPKIG00000003562	polr1e	99	42.344	Paramormyrops_kingsleyae
ENSCCAG00000029460	POLR1E	93	56.888	ENSPSIG00000003274	POLR1E	96	53.717	Pelodiscus_sinensis
ENSCCAG00000029460	POLR1E	94	42.065	ENSPMGG00000024169	polr1e	95	42.065	Periophthalmus_magnuspinnatus
ENSCCAG00000029460	POLR1E	100	60.341	ENSPEMG00000022300	-	96	60.341	Peromyscus_maniculatus_bairdii
ENSCCAG00000029460	POLR1E	100	76.527	ENSPEMG00000019151	-	97	72.315	Peromyscus_maniculatus_bairdii
ENSCCAG00000029460	POLR1E	94	66.919	ENSPCIG00000014798	POLR1E	97	66.919	Phascolarctos_cinereus
ENSCCAG00000029460	POLR1E	94	36.643	ENSPFOG00000019627	polr1e	99	36.735	Poecilia_formosa
ENSCCAG00000029460	POLR1E	98	39.078	ENSPLAG00000022679	polr1e	99	39.078	Poecilia_latipinna
ENSCCAG00000029460	POLR1E	84	39.385	ENSPMEG00000022123	polr1e	93	39.385	Poecilia_mexicana
ENSCCAG00000029460	POLR1E	98	38.835	ENSPREG00000009470	polr1e	99	38.835	Poecilia_reticulata
ENSCCAG00000029460	POLR1E	100	85.680	ENSPPYG00000019061	POLR1E	100	85.680	Pongo_abelii
ENSCCAG00000029460	POLR1E	78	69.079	ENSPCAG00000004891	POLR1E	100	69.079	Procavia_capensis
ENSCCAG00000029460	POLR1E	100	83.055	ENSPCOG00000027448	POLR1E	100	83.055	Propithecus_coquereli
ENSCCAG00000029460	POLR1E	94	79.949	ENSPVAG00000007940	POLR1E	99	70.513	Pteropus_vampyrus
ENSCCAG00000029460	POLR1E	99	40.811	ENSPNYG00000001032	polr1e	99	40.811	Pundamilia_nyererei
ENSCCAG00000029460	POLR1E	97	39.120	ENSPNAG00000006987	polr1e	99	39.120	Pygocentrus_nattereri
ENSCCAG00000029460	POLR1E	99	70.673	ENSRNOG00000012664	Polr1e	96	70.673	Rattus_norvegicus
ENSCCAG00000029460	POLR1E	99	82.410	ENSRBIG00000034214	POLR1E	100	85.039	Rhinopithecus_bieti
ENSCCAG00000029460	POLR1E	100	85.680	ENSRROG00000031986	POLR1E	100	85.680	Rhinopithecus_roxellana
ENSCCAG00000029460	POLR1E	100	90.931	ENSSBOG00000021415	POLR1E	100	90.931	Saimiri_boliviensis_boliviensis
ENSCCAG00000029460	POLR1E	81	66.860	ENSSHAG00000016084	POLR1E	96	66.860	Sarcophilus_harrisii
ENSCCAG00000029460	POLR1E	97	41.463	ENSSFOG00015002293	polr1e	98	41.463	Scleropages_formosus
ENSCCAG00000029460	POLR1E	99	41.050	ENSSMAG00000011672	polr1e	96	39.627	Scophthalmus_maximus
ENSCCAG00000029460	POLR1E	96	42.157	ENSSDUG00000022279	polr1e	97	42.157	Seriola_dumerili
ENSCCAG00000029460	POLR1E	96	41.667	ENSSLDG00000024918	polr1e	97	41.667	Seriola_lalandi_dorsalis
ENSCCAG00000029460	POLR1E	69	69.397	ENSSARG00000009810	-	80	60.776	Sorex_araneus
ENSCCAG00000029460	POLR1E	98	60.584	ENSSPUG00000009499	POLR1E	99	60.584	Sphenodon_punctatus
ENSCCAG00000029460	POLR1E	98	42.233	ENSSPAG00000021240	polr1e	99	42.233	Stegastes_partitus
ENSCCAG00000029460	POLR1E	100	81.146	ENSSSCG00000005347	POLR1E	100	81.146	Sus_scrofa
ENSCCAG00000029460	POLR1E	89	58.741	ENSTGUG00000007169	POLR1E	78	58.741	Taeniopygia_guttata
ENSCCAG00000029460	POLR1E	98	40.482	ENSTRUG00000020779	polr1e	99	41.053	Takifugu_rubripes
ENSCCAG00000029460	POLR1E	98	40.338	ENSTNIG00000017812	polr1e	99	40.338	Tetraodon_nigroviridis
ENSCCAG00000029460	POLR1E	100	76.372	ENSTBEG00000013786	POLR1E	95	70.982	Tupaia_belangeri
ENSCCAG00000029460	POLR1E	94	80.101	ENSTTRG00000008294	POLR1E	99	70.753	Tursiops_truncatus
ENSCCAG00000029460	POLR1E	100	79.475	ENSUAMG00000012474	POLR1E	100	79.837	Ursus_americanus
ENSCCAG00000029460	POLR1E	100	79.475	ENSUMAG00000011496	POLR1E	100	79.475	Ursus_maritimus
ENSCCAG00000029460	POLR1E	80	74.487	ENSVPAG00000009048	POLR1E	90	65.979	Vicugna_pacos
ENSCCAG00000029460	POLR1E	100	80.430	ENSVVUG00000019954	POLR1E	100	80.430	Vulpes_vulpes
ENSCCAG00000029460	POLR1E	98	48.792	ENSXETG00000006533	polr1e	99	48.792	Xenopus_tropicalis
ENSCCAG00000029460	POLR1E	98	38.916	ENSXCOG00000013706	polr1e	99	38.916	Xiphophorus_couchianus
ENSCCAG00000029460	POLR1E	98	39.563	ENSXMAG00000012484	polr1e	99	39.563	Xiphophorus_maculatus