EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000029472 (Gene tree)
Gene ID: 108304862
Gene Symbol: ZNF408
Alias: FLJ12827
Full Name: zinc finger protein 408
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 5688 bases
Position: chrKV389484.1:1050083-1055770
Accession: 108304862
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000023371	zf-C2H2	PF00096.26	1.3e-37	1	7
ENSCCAP00000023371	zf-C2H2	PF00096.26	1.3e-37	2	7
ENSCCAP00000023371	zf-C2H2	PF00096.26	1.3e-37	3	7
ENSCCAP00000023371	zf-C2H2	PF00096.26	1.3e-37	4	7
ENSCCAP00000023371	zf-C2H2	PF00096.26	1.3e-37	5	7
ENSCCAP00000023371	zf-C2H2	PF00096.26	1.3e-37	6	7
ENSCCAP00000023371	zf-C2H2	PF00096.26	1.3e-37	7	7
ENSCCAP00000023371	zf-met	PF12874.7	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000040874	ZNF408-201	2335	XM_017529284	ENSCCAP00000023371	715 (aa)	XP_017384773	A0A2K5R5F1

Gene Model

Click here to download ENSCCAG00000029472's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000029472's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000029472	ZNF408	56	42.759	ENSCCAG00000027604	ZNF2	88	45.223
ENSCCAG00000029472	ZNF408	85	33.333	ENSCCAG00000023157	PRDM5	98	34.982

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000029472	ZNF408	99	89.437	ENSG00000175213	ZNF408	99	89.437	Homo_sapiens
ENSCCAG00000029472	ZNF408	100	78.926	ENSAMEG00000006904	ZNF408	98	79.494	Ailuropoda_melanoleuca
ENSCCAG00000029472	ZNF408	99	88.079	ENSANAG00000036294	ZNF408	93	96.236	Aotus_nancymaae
ENSCCAG00000029472	ZNF408	90	39.237	ENSAMXG00000032642	znf408	91	39.757	Astyanax_mexicanus
ENSCCAG00000029472	ZNF408	99	95.211	ENSCJAG00000019859	ZNF408	99	95.211	Callithrix_jacchus
ENSCCAG00000029472	ZNF408	100	79.178	ENSCAFG00000009143	ZNF408	95	80.028	Canis_familiaris
ENSCCAG00000029472	ZNF408	100	79.178	ENSCAFG00020019155	ZNF408	95	80.028	Canis_lupus_dingo
ENSCCAG00000029472	ZNF408	82	77.685	ENSCHIG00000025346	ZNF408	97	77.685	Capra_hircus
ENSCCAG00000029472	ZNF408	100	79.444	ENSTSYG00000025443	ZNF408	98	80.508	Carlito_syrichta
ENSCCAG00000029472	ZNF408	56	96.564	ENSCHOG00000009909	ZNF408	75	96.564	Choloepus_hoffmanni
ENSCCAG00000029472	ZNF408	100	68.698	ENSCGRG00001023588	Zfp408	99	68.451	Cricetulus_griseus_chok1gshd
ENSCCAG00000029472	ZNF408	100	68.698	ENSCGRG00000017618	Zfp408	99	68.451	Cricetulus_griseus_crigri
ENSCCAG00000029472	ZNF408	100	76.210	ENSDNOG00000047669	ZNF408	98	76.512	Dasypus_novemcinctus
ENSCCAG00000029472	ZNF408	99	70.266	ENSDORG00000000387	Zfp408	98	71.019	Dipodomys_ordii
ENSCCAG00000029472	ZNF408	89	62.257	ENSETEG00000017621	-	95	66.095	Echinops_telfairi
ENSCCAG00000029472	ZNF408	100	78.650	ENSEASG00005015461	ZNF408	98	79.549	Equus_asinus_asinus
ENSCCAG00000029472	ZNF408	100	78.375	ENSECAG00000010878	ZNF408	98	79.267	Equus_caballus
ENSCCAG00000029472	ZNF408	94	69.514	ENSEEUG00000010466	ZNF408	94	69.072	Erinaceus_europaeus
ENSCCAG00000029472	ZNF408	100	80.417	ENSFCAG00000029105	ZNF408	99	80.563	Felis_catus
ENSCCAG00000029472	ZNF408	81	37.855	ENSFHEG00000016754	-	78	38.547	Fundulus_heteroclitus
ENSCCAG00000029472	ZNF408	94	36.871	ENSGAFG00000018557	-	99	36.190	Gambusia_affinis
ENSCCAG00000029472	ZNF408	99	89.155	ENSGGOG00000010152	ZNF408	99	89.155	Gorilla_gorilla
ENSCCAG00000029472	ZNF408	85	79.355	ENSLAFG00000027848	ZNF408	99	79.355	Loxodonta_africana
ENSCCAG00000029472	ZNF408	98	84.866	ENSMICG00000045320	ZNF408	98	84.866	Microcebus_murinus
ENSCCAG00000029472	ZNF408	72	53.671	ENSMODG00000019895	-	83	53.435	Monodelphis_domestica
ENSCCAG00000029472	ZNF408	98	79.635	ENSMPUG00000005490	ZNF408	98	79.635	Mustela_putorius_furo
ENSCCAG00000029472	ZNF408	99	70.752	ENSNGAG00000000309	Zfp408	98	71.246	Nannospalax_galili
ENSCCAG00000029472	ZNF408	100	88.472	ENSNLEG00000014132	ZNF408	99	88.592	Nomascus_leucogenys
ENSCCAG00000029472	ZNF408	99	65.401	ENSOPRG00000009225	ZNF408	95	66.914	Ochotona_princeps
ENSCCAG00000029472	ZNF408	100	76.944	ENSOCUG00000010953	ZNF408	98	77.650	Oryctolagus_cuniculus
ENSCCAG00000029472	ZNF408	86	83.144	ENSOGAG00000034080	ZNF408	100	83.144	Otolemur_garnettii
ENSCCAG00000029472	ZNF408	99	89.437	ENSPPAG00000034993	ZNF408	99	89.437	Pan_paniscus
ENSCCAG00000029472	ZNF408	100	80.694	ENSPPRG00000016866	ZNF408	99	80.845	Panthera_pardus
ENSCCAG00000029472	ZNF408	100	80.165	ENSPTIG00000015467	ZNF408	99	80.307	Panthera_tigris_altaica
ENSCCAG00000029472	ZNF408	99	89.437	ENSPTRG00000003551	ZNF408	99	89.437	Pan_troglodytes
ENSCCAG00000029472	ZNF408	77	70.270	ENSPEMG00000016757	Zfp408	99	69.910	Peromyscus_maniculatus_bairdii
ENSCCAG00000029472	ZNF408	94	37.225	ENSPFOG00000001760	-	92	48.556	Poecilia_formosa
ENSCCAG00000029472	ZNF408	82	47.619	ENSPLAG00000019895	-	99	47.273	Poecilia_latipinna
ENSCCAG00000029472	ZNF408	53	50.131	ENSPMEG00000021147	-	72	50.131	Poecilia_mexicana
ENSCCAG00000029472	ZNF408	94	37.143	ENSPREG00000017068	-	99	36.635	Poecilia_reticulata
ENSCCAG00000029472	ZNF408	99	87.606	ENSPPYG00000003318	ZNF408	99	88.648	Pongo_abelii
ENSCCAG00000029472	ZNF408	100	75.487	ENSPCAG00000014001	ZNF408	99	75.706	Procavia_capensis
ENSCCAG00000029472	ZNF408	98	83.921	ENSPCOG00000028698	ZNF408	98	83.921	Propithecus_coquereli
ENSCCAG00000029472	ZNF408	98	80.282	ENSPVAG00000015791	ZNF408	99	79.832	Pteropus_vampyrus
ENSCCAG00000029472	ZNF408	99	93.521	ENSSBOG00000033023	ZNF408	99	94.648	Saimiri_boliviensis_boliviensis
ENSCCAG00000029472	ZNF408	100	78.099	ENSSSCG00000023097	ZNF408	96	78.212	Sus_scrofa
ENSCCAG00000029472	ZNF408	76	91.235	ENSTBEG00000004260	ZNF408	81	91.235	Tupaia_belangeri
ENSCCAG00000029472	ZNF408	100	79.201	ENSUAMG00000026154	ZNF408	99	79.469	Ursus_americanus
ENSCCAG00000029472	ZNF408	100	78.926	ENSUMAG00000014405	ZNF408	99	79.190	Ursus_maritimus
ENSCCAG00000029472	ZNF408	100	79.315	ENSVVUG00000026805	ZNF408	95	79.609	Vulpes_vulpes
ENSCCAG00000029472	ZNF408	52	54.881	ENSXETG00000001980	znf408	100	53.562	Xenopus_tropicalis
ENSCCAG00000029472	ZNF408	65	45.085	ENSXCOG00000002869	-	88	44.872	Xiphophorus_couchianus
ENSCCAG00000029472	ZNF408	66	45.397	ENSXMAG00000018347	-	87	44.538	Xiphophorus_maculatus