EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000029474 (Gene tree)
Gene ID: 108308674
Gene Symbol: SRRM1
Alias: MGC39488|POP101|SRM160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 29671 bases
Position: chrKV389513.1:2451828-2481498
Accession: 108308674
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000023911	PWI	PF01480.17	4.2e-30	1	1
ENSCCAP00000023897	PWI	PF01480.17	8e-30	1	1
ENSCCAP00000023820	PWI	PF01480.17	8.6e-30	1	1
ENSCCAP00000023839	PWI	PF01480.17	8.7e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000041420	SRRM1-204	1548	-	ENSCCAP00000023911	515 (aa)	-	A0A2K5R6Z4
ENSCCAT00000041406	SRRM1-203	2436	-	ENSCCAP00000023897	811 (aa)	-	A0A2K5R6X7
ENSCCAT00000041347	SRRM1-202	2742	XM_017534580	ENSCCAP00000023839	913 (aa)	XP_017390069	A0A2K5R6U4
ENSCCAT00000041328	SRRM1-201	3852	XM_017534584	ENSCCAP00000023820	904 (aa)	XP_017390073	A0A2K5R6T6

Gene Model

Click here to download ENSCCAG00000029474's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000029474's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000029474	SRRM1	100	98.795	ENSG00000133226	SRRM1	100	100.000	Homo_sapiens
ENSCCAG00000029474	SRRM1	100	97.809	ENSAMEG00000010075	SRRM1	100	97.809	Ailuropoda_melanoleuca
ENSCCAG00000029474	SRRM1	51	89.015	ENSAPLG00000002066	SRRM1	59	75.267	Anas_platyrhynchos
ENSCCAG00000029474	SRRM1	100	99.558	ENSANAG00000035606	SRRM1	100	99.558	Aotus_nancymaae
ENSCCAG00000029474	SRRM1	100	97.235	ENSBTAG00000013772	SRRM1	100	97.235	Bos_taurus
ENSCCAG00000029474	SRRM1	100	99.124	ENSCJAG00000020822	SRRM1	100	99.124	Callithrix_jacchus
ENSCCAG00000029474	SRRM1	100	97.677	ENSCAFG00020020948	SRRM1	99	98.875	Canis_lupus_dingo
ENSCCAG00000029474	SRRM1	96	89.359	ENSCAFG00020000003	-	98	89.196	Canis_lupus_dingo
ENSCCAG00000029474	SRRM1	100	96.070	ENSCHIG00000014656	SRRM1	100	96.070	Capra_hircus
ENSCCAG00000029474	SRRM1	100	97.700	ENSTSYG00000006782	SRRM1	100	97.700	Carlito_syrichta
ENSCCAG00000029474	SRRM1	99	94.091	ENSCAPG00000011473	SRRM1	100	94.091	Cavia_aperea
ENSCCAG00000029474	SRRM1	100	95.133	ENSCPOG00000015594	SRRM1	100	95.133	Cavia_porcellus
ENSCCAG00000029474	SRRM1	100	98.562	ENSCATG00000031303	SRRM1	100	98.562	Cercocebus_atys
ENSCCAG00000029474	SRRM1	100	96.018	ENSCLAG00000014592	SRRM1	100	96.018	Chinchilla_lanigera
ENSCCAG00000029474	SRRM1	74	97.778	ENSCHOG00000000027	SRRM1	73	99.155	Choloepus_hoffmanni
ENSCCAG00000029474	SRRM1	100	98.467	ENSCANG00000028271	SRRM1	100	98.467	Colobus_angolensis_palliatus
ENSCCAG00000029474	SRRM1	96	96.162	ENSCGRG00001014174	Srrm1	56	95.968	Cricetulus_griseus_chok1gshd
ENSCCAG00000029474	SRRM1	96	96.356	ENSCGRG00000017603	Srrm1	55	96.356	Cricetulus_griseus_crigri
ENSCCAG00000029474	SRRM1	96	92.698	ENSDNOG00000049141	SRRM1	58	93.663	Dasypus_novemcinctus
ENSCCAG00000029474	SRRM1	96	95.335	ENSETEG00000006817	SRRM1	54	95.335	Echinops_telfairi
ENSCCAG00000029474	SRRM1	100	96.187	ENSEASG00005004270	SRRM1	100	96.187	Equus_asinus_asinus
ENSCCAG00000029474	SRRM1	100	96.903	ENSECAG00000026981	SRRM1	100	96.903	Equus_caballus
ENSCCAG00000029474	SRRM1	100	97.898	ENSFCAG00000000678	-	100	97.898	Felis_catus
ENSCCAG00000029474	SRRM1	50	91.571	ENSFALG00000000476	SRRM1	100	100.000	Ficedula_albicollis
ENSCCAG00000029474	SRRM1	100	96.681	ENSFDAG00000009903	SRRM1	100	96.681	Fukomys_damarensis
ENSCCAG00000029474	SRRM1	50	90.038	ENSGALG00000001283	SRRM1	99	100.000	Gallus_gallus
ENSCCAG00000029474	SRRM1	100	98.686	ENSGGOG00000005209	SRRM1	100	98.686	Gorilla_gorilla
ENSCCAG00000029474	SRRM1	100	96.792	ENSHGLG00000017105	SRRM1	100	96.792	Heterocephalus_glaber_female
ENSCCAG00000029474	SRRM1	99	96.333	ENSHGLG00100016772	SRRM1	99	96.333	Heterocephalus_glaber_male
ENSCCAG00000029474	SRRM1	100	97.566	ENSSTOG00000014640	SRRM1	100	97.566	Ictidomys_tridecemlineatus
ENSCCAG00000029474	SRRM1	95	96.334	ENSJJAG00000018643	Srrm1	55	96.334	Jaculus_jaculus
ENSCCAG00000029474	SRRM1	100	94.168	ENSLAFG00000013830	SRRM1	100	94.168	Loxodonta_africana
ENSCCAG00000029474	SRRM1	86	78.704	ENSMFAG00000038841	-	61	79.678	Macaca_fascicularis
ENSCCAG00000029474	SRRM1	100	98.451	ENSMFAG00000025726	SRRM1	100	98.451	Macaca_fascicularis
ENSCCAG00000029474	SRRM1	100	98.341	ENSMMUG00000006645	SRRM1	100	98.341	Macaca_mulatta
ENSCCAG00000029474	SRRM1	55	80.080	ENSMMUG00000039269	-	59	79.477	Macaca_mulatta
ENSCCAG00000029474	SRRM1	100	98.451	ENSMNEG00000039415	SRRM1	100	98.451	Macaca_nemestrina
ENSCCAG00000029474	SRRM1	96	98.785	ENSMLEG00000038030	-	100	92.442	Mandrillus_leucophaeus
ENSCCAG00000029474	SRRM1	59	69.963	ENSMLEG00000032221	-	61	72.624	Mandrillus_leucophaeus
ENSCCAG00000029474	SRRM1	97	96.177	ENSMAUG00000015705	Srrm1	54	96.552	Mesocricetus_auratus
ENSCCAG00000029474	SRRM1	100	97.456	ENSMICG00000006553	SRRM1	100	97.456	Microcebus_murinus
ENSCCAG00000029474	SRRM1	96	96.146	ENSMODG00000013861	SRRM1	55	96.146	Monodelphis_domestica
ENSCCAG00000029474	SRRM1	96	96.552	MGP_CAROLIEiJ_G0026636	Srrm1	100	85.965	Mus_caroli
ENSCCAG00000029474	SRRM1	96	96.755	ENSMUSG00000028809	Srrm1	100	85.965	Mus_musculus
ENSCCAG00000029474	SRRM1	96	96.755	MGP_PahariEiJ_G0028969	Srrm1	100	85.965	Mus_pahari
ENSCCAG00000029474	SRRM1	96	96.755	MGP_SPRETEiJ_G0027616	Srrm1	100	85.965	Mus_spretus
ENSCCAG00000029474	SRRM1	61	97.024	ENSMPUG00000000018	-	75	98.780	Mustela_putorius_furo
ENSCCAG00000029474	SRRM1	94	98.548	ENSMLUG00000006246	SRRM1	53	98.548	Myotis_lucifugus
ENSCCAG00000029474	SRRM1	96	96.755	ENSNGAG00000014562	Srrm1	54	96.755	Nannospalax_galili
ENSCCAG00000029474	SRRM1	100	98.795	ENSNLEG00000008966	SRRM1	100	98.795	Nomascus_leucogenys
ENSCCAG00000029474	SRRM1	60	88.889	ENSMEUG00000014704	SRRM1	59	88.580	Notamacropus_eugenii
ENSCCAG00000029474	SRRM1	100	96.397	ENSOCUG00000008438	SRRM1	100	96.397	Oryctolagus_cuniculus
ENSCCAG00000029474	SRRM1	100	96.187	ENSOGAG00000010210	SRRM1	100	96.187	Otolemur_garnettii
ENSCCAG00000029474	SRRM1	96	97.972	ENSOARG00000006453	SRRM1	99	97.288	Ovis_aries
ENSCCAG00000029474	SRRM1	100	98.686	ENSPPAG00000043918	SRRM1	100	98.686	Pan_paniscus
ENSCCAG00000029474	SRRM1	100	97.898	ENSPPRG00000002509	SRRM1	100	97.898	Panthera_pardus
ENSCCAG00000029474	SRRM1	59	93.625	ENSPTIG00000008778	-	60	93.321	Panthera_tigris_altaica
ENSCCAG00000029474	SRRM1	100	98.783	ENSPTRG00000000349	SRRM1	100	98.783	Pan_troglodytes
ENSCCAG00000029474	SRRM1	55	78.427	ENSPANG00000035568	-	59	77.419	Papio_anubis
ENSCCAG00000029474	SRRM1	100	98.397	ENSPANG00000010194	SRRM1	100	97.912	Papio_anubis
ENSCCAG00000029474	SRRM1	96	96.957	ENSPEMG00000006254	Srrm1	54	96.552	Peromyscus_maniculatus_bairdii
ENSCCAG00000029474	SRRM1	96	95.538	ENSPCIG00000009214	SRRM1	54	95.538	Phascolarctos_cinereus
ENSCCAG00000029474	SRRM1	100	98.578	ENSPPYG00000001716	SRRM1	100	98.578	Pongo_abelii
ENSCCAG00000029474	SRRM1	52	100.000	ENSPCAG00000015138	SRRM1	52	100.000	Procavia_capensis
ENSCCAG00000029474	SRRM1	100	97.593	ENSPCOG00000021311	SRRM1	100	97.593	Propithecus_coquereli
ENSCCAG00000029474	SRRM1	100	98.028	ENSPVAG00000005836	SRRM1	100	98.028	Pteropus_vampyrus
ENSCCAG00000029474	SRRM1	96	96.552	ENSRNOG00000018194	Srrm1	54	96.552	Rattus_norvegicus
ENSCCAG00000029474	SRRM1	96	98.783	ENSRBIG00000035461	SRRM1	99	91.996	Rhinopithecus_bieti
ENSCCAG00000029474	SRRM1	100	98.467	ENSRROG00000035151	SRRM1	100	98.467	Rhinopithecus_roxellana
ENSCCAG00000029474	SRRM1	100	98.028	ENSSBOG00000019884	SRRM1	99	100.000	Saimiri_boliviensis_boliviensis
ENSCCAG00000029474	SRRM1	89	96.296	ENSSHAG00000011061	SRRM1	51	96.296	Sarcophilus_harrisii
ENSCCAG00000029474	SRRM1	61	92.787	ENSSARG00000013718	SRRM1	60	92.787	Sorex_araneus
ENSCCAG00000029474	SRRM1	67	87.681	ENSSPUG00000015890	SRRM1	57	82.103	Sphenodon_punctatus
ENSCCAG00000029474	SRRM1	99	97.036	ENSSSCG00000032947	SRRM1	100	97.442	Sus_scrofa
ENSCCAG00000029474	SRRM1	100	97.152	ENSTBEG00000000100	SRRM1	100	97.152	Tupaia_belangeri
ENSCCAG00000029474	SRRM1	99	97.020	ENSTTRG00000009365	SRRM1	100	97.020	Tursiops_truncatus
ENSCCAG00000029474	SRRM1	89	99.564	ENSUMAG00000013121	SRRM1	95	98.747	Ursus_maritimus
ENSCCAG00000029474	SRRM1	90	95.662	ENSVPAG00000007698	SRRM1	52	95.662	Vicugna_pacos
ENSCCAG00000029474	SRRM1	96	98.377	ENSVVUG00000026966	SRRM1	97	95.307	Vulpes_vulpes