EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000029484 (Gene tree)
Gene ID: 108311439
Gene Symbol: -
Alias: ASF|MGC5228|SF2|SF2p33|SFRS1|SRp30a
Full Name: serine and arginine rich splicing factor 1
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 4833 bases
Position: chrKV389541.1:5160202-5165034
Accession: 108311439
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000023431	RRM_1	PF00076.22	1.9e-33	1	2
ENSCCAP00000023431	RRM_1	PF00076.22	1.9e-33	2	2
ENSCCAP00000023447	RRM_1	PF00076.22	2e-33	1	2
ENSCCAP00000023447	RRM_1	PF00076.22	2e-33	2	2
ENSCCAP00000023456	RRM_1	PF00076.22	8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000040935	-	3851	XM_017538850	ENSCCAP00000023431	248 (aa)	XP_017394339	A0A2K5R5L0
ENSCCAT00000040960	-	222	-	ENSCCAP00000023456	73 (aa)	-	A0A2K5R5N8
ENSCCAT00000040951	-	762	-	ENSCCAP00000023447	253 (aa)	-	A0A2K5R5N7

Gene Model

Click here to download ENSCCAG00000029484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000029484's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000029484	-	75	41.818	ENSCCAG00000018540	-	55	37.778
ENSCCAG00000029484	-	79	50.000	ENSCCAG00000032244	SRSF3	58	48.649
ENSCCAG00000029484	-	78	61.404	ENSCCAG00000029002	SRSF5	86	45.968
ENSCCAG00000029484	-	75	39.344	ENSCCAG00000037368	-	76	36.364
ENSCCAG00000029484	-	77	40.678	ENSCCAG00000036263	-	75	39.683
ENSCCAG00000029484	-	77	50.000	ENSCCAG00000026018	-	58	40.670
ENSCCAG00000029484	-	99	68.056	ENSCCAG00000036053	SRSF9	97	62.698
ENSCCAG00000029484	-	77	40.678	ENSCCAG00000028588	-	83	39.706

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000029484	-	100	100.000	ENSG00000136450	SRSF1	100	100.000	Homo_sapiens
ENSCCAG00000029484	-	99	90.278	ENSAPOG00000008542	-	100	86.220	Acanthochromis_polyacanthus
ENSCCAG00000029484	-	93	91.176	ENSAPOG00000002748	-	98	84.362	Acanthochromis_polyacanthus
ENSCCAG00000029484	-	99	98.611	ENSAMEG00000002635	SRSF1	100	97.177	Ailuropoda_melanoleuca
ENSCCAG00000029484	-	93	91.176	ENSACIG00000008091	srsf1a	98	78.926	Amphilophus_citrinellus
ENSCCAG00000029484	-	93	91.176	ENSAOCG00000010671	-	98	85.185	Amphiprion_ocellaris
ENSCCAG00000029484	-	99	90.278	ENSAOCG00000000337	-	100	86.508	Amphiprion_ocellaris
ENSCCAG00000029484	-	93	91.176	ENSAPEG00000009915	-	98	85.185	Amphiprion_percula
ENSCCAG00000029484	-	99	90.278	ENSAPEG00000023352	-	99	86.561	Amphiprion_percula
ENSCCAG00000029484	-	99	87.500	ENSATEG00000021567	-	100	84.959	Anabas_testudineus
ENSCCAG00000029484	-	93	91.176	ENSATEG00000022403	-	98	84.898	Anabas_testudineus
ENSCCAG00000029484	-	100	98.387	ENSACAG00000005542	-	100	98.387	Anolis_carolinensis
ENSCCAG00000029484	-	70	92.157	ENSANAG00000025417	-	99	76.016	Aotus_nancymaae
ENSCCAG00000029484	-	100	100.000	ENSANAG00000020583	-	100	100.000	Aotus_nancymaae
ENSCCAG00000029484	-	95	95.652	ENSAMXG00000035996	srsf1a	98	93.145	Astyanax_mexicanus
ENSCCAG00000029484	-	54	78.065	ENSAMXG00000024373	-	94	77.778	Astyanax_mexicanus
ENSCCAG00000029484	-	100	100.000	ENSBTAG00000014766	SRSF1	100	100.000	Bos_taurus
ENSCCAG00000029484	-	97	87.324	ENSCJAG00000008111	-	88	91.371	Callithrix_jacchus
ENSCCAG00000029484	-	100	100.000	ENSCJAG00000041713	-	100	100.000	Callithrix_jacchus
ENSCCAG00000029484	-	100	100.000	ENSCAFG00000017430	SRSF1	100	100.000	Canis_familiaris
ENSCCAG00000029484	-	100	100.000	ENSCAFG00020025632	-	100	100.000	Canis_lupus_dingo
ENSCCAG00000029484	-	100	100.000	ENSCHIG00000010787	SRSF1	100	100.000	Capra_hircus
ENSCCAG00000029484	-	100	100.000	ENSTSYG00000013899	-	100	100.000	Carlito_syrichta
ENSCCAG00000029484	-	100	100.000	ENSCPOG00000032681	-	100	100.000	Cavia_porcellus
ENSCCAG00000029484	-	100	100.000	ENSCATG00000042294	-	100	100.000	Cercocebus_atys
ENSCCAG00000029484	-	99	94.444	ENSCATG00000005962	-	75	96.629	Cercocebus_atys
ENSCCAG00000029484	-	100	100.000	ENSCLAG00000014707	-	100	100.000	Chinchilla_lanigera
ENSCCAG00000029484	-	100	99.209	ENSCSAG00000005642	-	100	99.209	Chlorocebus_sabaeus
ENSCCAG00000029484	-	100	100.000	ENSCHOG00000001899	SRSF1	100	100.000	Choloepus_hoffmanni
ENSCCAG00000029484	-	100	98.814	ENSCPBG00000009851	-	100	98.814	Chrysemys_picta_bellii
ENSCCAG00000029484	-	100	100.000	ENSCANG00000029726	-	100	100.000	Colobus_angolensis_palliatus
ENSCCAG00000029484	-	100	100.000	ENSCGRG00001000670	Srsf1	100	100.000	Cricetulus_griseus_chok1gshd
ENSCCAG00000029484	-	100	100.000	ENSCGRG00000005590	Srsf1	100	100.000	Cricetulus_griseus_crigri
ENSCCAG00000029484	-	93	91.176	ENSCSEG00000014272	-	98	84.553	Cynoglossus_semilaevis
ENSCCAG00000029484	-	99	88.889	ENSCSEG00000009973	-	100	80.303	Cynoglossus_semilaevis
ENSCCAG00000029484	-	93	91.176	ENSCVAG00000018617	-	98	85.185	Cyprinodon_variegatus
ENSCCAG00000029484	-	95	84.058	ENSCVAG00000005458	-	98	86.179	Cyprinodon_variegatus
ENSCCAG00000029484	-	99	96.735	ENSDARG00000017843	srsf1b	99	96.735	Danio_rerio
ENSCCAG00000029484	-	95	95.652	ENSDARG00000057691	srsf1a	98	92.095	Danio_rerio
ENSCCAG00000029484	-	100	100.000	ENSDNOG00000011737	-	100	100.000	Dasypus_novemcinctus
ENSCCAG00000029484	-	100	100.000	ENSDORG00000015082	Srsf1	100	100.000	Dipodomys_ordii
ENSCCAG00000029484	-	99	95.833	ENSETEG00000005349	-	63	98.913	Echinops_telfairi
ENSCCAG00000029484	-	100	100.000	ENSEASG00005002922	-	100	100.000	Equus_asinus_asinus
ENSCCAG00000029484	-	100	100.000	ENSECAG00000016654	SRSF1	100	100.000	Equus_caballus
ENSCCAG00000029484	-	99	98.611	ENSEEUG00000009255	-	63	100.000	Erinaceus_europaeus
ENSCCAG00000029484	-	95	92.754	ENSELUG00000021646	srsf1a	98	79.839	Esox_lucius
ENSCCAG00000029484	-	100	100.000	ENSFCAG00000002250	-	100	100.000	Felis_catus
ENSCCAG00000029484	-	100	82.213	ENSFALG00000005062	-	100	82.213	Ficedula_albicollis
ENSCCAG00000029484	-	100	100.000	ENSFDAG00000010646	-	100	100.000	Fukomys_damarensis
ENSCCAG00000029484	-	93	91.176	ENSFHEG00000003174	srsf1a	98	85.185	Fundulus_heteroclitus
ENSCCAG00000029484	-	93	94.118	ENSGMOG00000014787	-	99	82.645	Gadus_morhua
ENSCCAG00000029484	-	100	98.790	ENSGALG00000005525	SRSF1	100	98.790	Gallus_gallus
ENSCCAG00000029484	-	99	88.889	ENSGACG00000020621	srsf1b	100	74.390	Gasterosteus_aculeatus
ENSCCAG00000029484	-	100	98.814	ENSGAGG00000022965	-	100	98.814	Gopherus_agassizii
ENSCCAG00000029484	-	100	100.000	ENSGGOG00000004386	SRSF1	100	100.000	Gorilla_gorilla
ENSCCAG00000029484	-	93	91.176	ENSHBUG00000016788	srsf1a	98	84.774	Haplochromis_burtoni
ENSCCAG00000029484	-	87	100.000	ENSHGLG00000000669	-	100	100.000	Heterocephalus_glaber_female
ENSCCAG00000029484	-	87	100.000	ENSHGLG00000000600	-	100	100.000	Heterocephalus_glaber_female
ENSCCAG00000029484	-	100	100.000	ENSHGLG00100016906	-	100	100.000	Heterocephalus_glaber_male
ENSCCAG00000029484	-	95	88.406	ENSHCOG00000018918	srsf1a	97	81.928	Hippocampus_comes
ENSCCAG00000029484	-	95	94.203	ENSIPUG00000017039	srsf1a	98	93.145	Ictalurus_punctatus
ENSCCAG00000029484	-	100	95.968	ENSIPUG00000008750	srsf1b	100	95.968	Ictalurus_punctatus
ENSCCAG00000029484	-	100	100.000	ENSSTOG00000000243	-	100	100.000	Ictidomys_tridecemlineatus
ENSCCAG00000029484	-	100	100.000	ENSJJAG00000000102	-	100	100.000	Jaculus_jaculus
ENSCCAG00000029484	-	99	97.222	ENSJJAG00000014464	-	95	88.189	Jaculus_jaculus
ENSCCAG00000029484	-	93	91.176	ENSKMAG00000019232	srsf1a	98	83.951	Kryptolebias_marmoratus
ENSCCAG00000029484	-	93	91.176	ENSLBEG00000020864	-	98	84.362	Labrus_bergylta
ENSCCAG00000029484	-	99	77.778	ENSLBEG00000015294	-	98	83.133	Labrus_bergylta
ENSCCAG00000029484	-	95	98.551	ENSLACG00000014160	srsf1a	92	93.878	Latimeria_chalumnae
ENSCCAG00000029484	-	99	98.611	ENSLOCG00000005994	srsf1a	100	97.177	Lepisosteus_oculatus
ENSCCAG00000029484	-	100	100.000	ENSLAFG00000025743	SRSF1	100	100.000	Loxodonta_africana
ENSCCAG00000029484	-	100	100.000	ENSMFAG00000040003	-	100	100.000	Macaca_fascicularis
ENSCCAG00000029484	-	100	100.000	ENSMMUG00000004725	SRSF1	100	100.000	Macaca_mulatta
ENSCCAG00000029484	-	100	97.233	ENSMMUG00000003260	-	100	97.233	Macaca_mulatta
ENSCCAG00000029484	-	100	100.000	ENSMNEG00000027680	-	100	100.000	Macaca_nemestrina
ENSCCAG00000029484	-	100	96.838	ENSMNEG00000015983	-	100	96.838	Macaca_nemestrina
ENSCCAG00000029484	-	100	100.000	ENSMLEG00000040509	SRSF1	100	100.000	Mandrillus_leucophaeus
ENSCCAG00000029484	-	100	94.466	ENSMLEG00000015243	-	100	94.466	Mandrillus_leucophaeus
ENSCCAG00000029484	-	99	94.444	ENSMAMG00000019691	-	100	88.211	Mastacembelus_armatus
ENSCCAG00000029484	-	93	91.176	ENSMAMG00000018454	-	98	85.185	Mastacembelus_armatus
ENSCCAG00000029484	-	99	88.889	ENSMAMG00000019687	-	100	85.081	Mastacembelus_armatus
ENSCCAG00000029484	-	100	100.000	ENSMAUG00000021845	Srsf1	100	100.000	Mesocricetus_auratus
ENSCCAG00000029484	-	100	100.000	ENSMICG00000013639	-	100	100.000	Microcebus_murinus
ENSCCAG00000029484	-	100	100.000	ENSMOCG00000001996	Srsf1	100	100.000	Microtus_ochrogaster
ENSCCAG00000029484	-	93	91.176	ENSMMOG00000014354	srsf1a	98	78.099	Mola_mola
ENSCCAG00000029484	-	99	98.611	ENSMODG00000014781	-	63	98.919	Monodelphis_domestica
ENSCCAG00000029484	-	95	89.855	ENSMALG00000017129	-	75	88.601	Monopterus_albus
ENSCCAG00000029484	-	99	91.667	ENSMALG00000007763	-	79	79.695	Monopterus_albus
ENSCCAG00000029484	-	100	100.000	MGP_CAROLIEiJ_G0016943	Srsf1	100	100.000	Mus_caroli
ENSCCAG00000029484	-	100	100.000	ENSMUSG00000018379	Srsf1	100	100.000	Mus_musculus
ENSCCAG00000029484	-	100	100.000	MGP_PahariEiJ_G0018074	Srsf1	100	100.000	Mus_pahari
ENSCCAG00000029484	-	100	100.000	MGP_SPRETEiJ_G0017790	Srsf1	100	100.000	Mus_spretus
ENSCCAG00000029484	-	100	100.000	ENSMPUG00000015369	SRSF1	100	100.000	Mustela_putorius_furo
ENSCCAG00000029484	-	99	91.667	ENSMLUG00000023995	-	100	90.323	Myotis_lucifugus
ENSCCAG00000029484	-	100	100.000	ENSMLUG00000011040	SRSF1	100	100.000	Myotis_lucifugus
ENSCCAG00000029484	-	100	100.000	ENSNGAG00000011395	Srsf1	100	100.000	Nannospalax_galili
ENSCCAG00000029484	-	99	91.667	ENSNBRG00000008041	srsf1b	80	82.741	Neolamprologus_brichardi
ENSCCAG00000029484	-	100	100.000	ENSNLEG00000008088	-	100	100.000	Nomascus_leucogenys
ENSCCAG00000029484	-	99	98.611	ENSMEUG00000002783	-	100	98.425	Notamacropus_eugenii
ENSCCAG00000029484	-	74	100.000	ENSOPRG00000001234	-	100	100.000	Ochotona_princeps
ENSCCAG00000029484	-	100	99.597	ENSODEG00000011481	-	100	99.597	Octodon_degus
ENSCCAG00000029484	-	99	94.444	ENSONIG00000004860	-	81	90.863	Oreochromis_niloticus
ENSCCAG00000029484	-	93	91.176	ENSONIG00000013160	-	98	84.774	Oreochromis_niloticus
ENSCCAG00000029484	-	99	72.222	ENSOCUG00000010894	-	77	71.795	Oryctolagus_cuniculus
ENSCCAG00000029484	-	93	91.176	ENSORLG00000004580	srsf1a	98	85.185	Oryzias_latipes
ENSCCAG00000029484	-	93	91.176	ENSORLG00020009456	srsf1a	98	85.185	Oryzias_latipes_hni
ENSCCAG00000029484	-	93	91.176	ENSORLG00015014384	srsf1a	98	84.774	Oryzias_latipes_hsok
ENSCCAG00000029484	-	71	90.341	ENSOMEG00000004106	srsf1a	92	82.743	Oryzias_melastigma
ENSCCAG00000029484	-	100	100.000	ENSOGAG00000025950	-	100	100.000	Otolemur_garnettii
ENSCCAG00000029484	-	99	97.222	ENSOARG00000008323	SRSF1	100	95.161	Ovis_aries
ENSCCAG00000029484	-	100	100.000	ENSPPAG00000043403	-	100	100.000	Pan_paniscus
ENSCCAG00000029484	-	100	100.000	ENSPPRG00000004238	-	100	100.000	Panthera_pardus
ENSCCAG00000029484	-	100	100.000	ENSPTRG00000049077	SRSF1	100	100.000	Pan_troglodytes
ENSCCAG00000029484	-	100	100.000	ENSPANG00000022305	-	100	100.000	Papio_anubis
ENSCCAG00000029484	-	100	77.075	ENSPANG00000030275	-	100	76.680	Papio_anubis
ENSCCAG00000029484	-	99	97.222	ENSPKIG00000012857	srsf1b	100	95.968	Paramormyrops_kingsleyae
ENSCCAG00000029484	-	99	95.102	ENSPKIG00000007204	srsf1a	99	95.102	Paramormyrops_kingsleyae
ENSCCAG00000029484	-	99	78.378	ENSPSIG00000009000	-	100	92.000	Pelodiscus_sinensis
ENSCCAG00000029484	-	96	84.937	ENSPMGG00000005467	-	99	85.470	Periophthalmus_magnuspinnatus
ENSCCAG00000029484	-	95	89.855	ENSPMGG00000013112	-	99	85.654	Periophthalmus_magnuspinnatus
ENSCCAG00000029484	-	100	100.000	ENSPEMG00000021416	Srsf1	100	100.000	Peromyscus_maniculatus_bairdii
ENSCCAG00000029484	-	100	99.197	ENSPCIG00000006076	-	100	99.197	Phascolarctos_cinereus
ENSCCAG00000029484	-	96	82.857	ENSPFOG00000018325	-	86	85.714	Poecilia_formosa
ENSCCAG00000029484	-	96	82.857	ENSPLAG00000008416	srsf1b	98	85.714	Poecilia_latipinna
ENSCCAG00000029484	-	93	91.176	ENSPMEG00000020607	-	98	87.805	Poecilia_mexicana
ENSCCAG00000029484	-	93	91.176	ENSPMEG00000014312	-	98	87.805	Poecilia_mexicana
ENSCCAG00000029484	-	96	82.857	ENSPMEG00000002388	-	98	85.714	Poecilia_mexicana
ENSCCAG00000029484	-	95	89.855	ENSPREG00000009667	srsf1a	98	85.185	Poecilia_reticulata
ENSCCAG00000029484	-	100	100.000	ENSPPYG00000008240	SRSF1	100	100.000	Pongo_abelii
ENSCCAG00000029484	-	100	100.000	ENSPCAG00000005199	SRSF1	100	100.000	Procavia_capensis
ENSCCAG00000029484	-	99	86.111	ENSPCOG00000025736	-	95	76.531	Propithecus_coquereli
ENSCCAG00000029484	-	100	100.000	ENSPCOG00000023654	-	100	100.000	Propithecus_coquereli
ENSCCAG00000029484	-	89	100.000	ENSPVAG00000000519	-	75	100.000	Pteropus_vampyrus
ENSCCAG00000029484	-	99	97.222	ENSPNAG00000014601	srsf1b	100	94.355	Pygocentrus_nattereri
ENSCCAG00000029484	-	95	95.652	ENSPNAG00000022241	srsf1a	98	90.947	Pygocentrus_nattereri
ENSCCAG00000029484	-	100	100.000	ENSRNOG00000050323	Srsf1	100	100.000	Rattus_norvegicus
ENSCCAG00000029484	-	100	100.000	ENSRBIG00000034445	-	100	100.000	Rhinopithecus_bieti
ENSCCAG00000029484	-	100	100.000	ENSRROG00000041506	-	100	100.000	Rhinopithecus_roxellana
ENSCCAG00000029484	-	100	100.000	ENSSBOG00000025377	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSCCAG00000029484	-	100	99.197	ENSSHAG00000002552	-	100	99.197	Sarcophilus_harrisii
ENSCCAG00000029484	-	82	78.333	ENSSFOG00015001585	-	72	80.519	Scleropages_formosus
ENSCCAG00000029484	-	66	81.250	ENSSFOG00015010677	-	59	83.077	Scleropages_formosus
ENSCCAG00000029484	-	99	96.356	ENSSFOG00015004800	srsf1a	99	96.356	Scleropages_formosus
ENSCCAG00000029484	-	93	91.176	ENSSMAG00000007018	-	98	83.128	Scophthalmus_maximus
ENSCCAG00000029484	-	99	88.889	ENSSMAG00000009719	-	100	86.275	Scophthalmus_maximus
ENSCCAG00000029484	-	99	88.889	ENSSDUG00000003929	-	99	77.510	Seriola_dumerili
ENSCCAG00000029484	-	93	91.176	ENSSDUG00000011303	-	98	84.362	Seriola_dumerili
ENSCCAG00000029484	-	99	88.889	ENSSLDG00000016868	-	99	82.661	Seriola_lalandi_dorsalis
ENSCCAG00000029484	-	99	86.111	ENSSLDG00000016895	-	99	76.113	Seriola_lalandi_dorsalis
ENSCCAG00000029484	-	93	91.176	ENSSLDG00000010543	-	98	84.362	Seriola_lalandi_dorsalis
ENSCCAG00000029484	-	99	98.611	ENSSARG00000010949	-	63	100.000	Sorex_araneus
ENSCCAG00000029484	-	100	98.814	ENSSPUG00000000804	-	100	98.814	Sphenodon_punctatus
ENSCCAG00000029484	-	99	88.889	ENSSPAG00000014152	-	99	84.556	Stegastes_partitus
ENSCCAG00000029484	-	93	91.176	ENSSPAG00000022562	-	98	85.597	Stegastes_partitus
ENSCCAG00000029484	-	100	100.000	ENSSSCG00000017626	-	100	100.000	Sus_scrofa
ENSCCAG00000029484	-	74	98.370	ENSTGUG00000008416	-	100	98.370	Taeniopygia_guttata
ENSCCAG00000029484	-	93	91.176	ENSTRUG00000003691	srsf1a	98	84.362	Takifugu_rubripes
ENSCCAG00000029484	-	93	91.176	ENSTNIG00000016223	srsf1a	98	84.362	Tetraodon_nigroviridis
ENSCCAG00000029484	-	99	94.444	ENSTBEG00000015378	-	63	98.370	Tupaia_belangeri
ENSCCAG00000029484	-	74	100.000	ENSTTRG00000007310	SRSF1	100	100.000	Tursiops_truncatus
ENSCCAG00000029484	-	100	100.000	ENSUAMG00000009858	SRSF1	100	100.000	Ursus_americanus
ENSCCAG00000029484	-	100	100.000	ENSUMAG00000000455	-	100	100.000	Ursus_maritimus
ENSCCAG00000029484	-	100	99.597	ENSVPAG00000010094	SRSF1	100	99.597	Vicugna_pacos
ENSCCAG00000029484	-	100	100.000	ENSVVUG00000011882	-	100	100.000	Vulpes_vulpes
ENSCCAG00000029484	-	99	98.611	ENSXETG00000008954	srsf1	100	91.386	Xenopus_tropicalis
ENSCCAG00000029484	-	93	91.176	ENSXMAG00000011766	srsf1a	98	85.185	Xiphophorus_maculatus