EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000029530 (Gene tree)
Gene ID: 108284677
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 6247 bases
Position: chrKV389707.1:3031039-3037285
Accession: 108284677
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000023499	PseudoU_synth_2	PF00849.22	6.1e-20	1	1
ENSCCAP00000023516	PseudoU_synth_2	PF00849.22	1.4e-18	1	1
ENSCCAP00000023508	PseudoU_synth_2	PF00849.22	3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000041021	RPUSD3-203	639	-	ENSCCAP00000023516	212 (aa)	-	A0A2K5R5U6
ENSCCAT00000041004	RPUSD3-201	1434	XM_017501533	ENSCCAP00000023499	348 (aa)	XP_017357022	A0A2K5R5V7
ENSCCAT00000041013	RPUSD3-202	1002	-	ENSCCAP00000023508	333 (aa)	-	A0A2K5R5T4

Gene Model

Click here to download ENSCCAG00000029530's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000029530's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000029530	RPUSD3	100	90.566	ENSG00000156990	RPUSD3	100	90.566	Homo_sapiens
ENSCCAG00000029530	RPUSD3	100	78.409	ENSAMEG00000016227	RPUSD3	100	78.409	Ailuropoda_melanoleuca
ENSCCAG00000029530	RPUSD3	83	56.818	ENSACAG00000009836	RPUSD3	81	56.338	Anolis_carolinensis
ENSCCAG00000029530	RPUSD3	96	90.148	ENSANAG00000019945	-	82	91.626	Aotus_nancymaae
ENSCCAG00000029530	RPUSD3	99	69.524	ENSANAG00000007127	-	100	69.524	Aotus_nancymaae
ENSCCAG00000029530	RPUSD3	99	86.124	ENSANAG00000038118	-	98	86.124	Aotus_nancymaae
ENSCCAG00000029530	RPUSD3	95	82.673	ENSBTAG00000007968	RPUSD3	100	79.360	Bos_taurus
ENSCCAG00000029530	RPUSD3	100	77.841	ENSCAFG00000029733	RPUSD3	100	77.841	Canis_familiaris
ENSCCAG00000029530	RPUSD3	100	77.841	ENSCAFG00020008582	RPUSD3	100	77.841	Canis_lupus_dingo
ENSCCAG00000029530	RPUSD3	98	78.779	ENSCHIG00000026027	RPUSD3	100	78.779	Capra_hircus
ENSCCAG00000029530	RPUSD3	95	81.056	ENSTSYG00000009994	RPUSD3	96	81.056	Carlito_syrichta
ENSCCAG00000029530	RPUSD3	76	80.228	ENSCAPG00000017559	RPUSD3	99	80.228	Cavia_aperea
ENSCCAG00000029530	RPUSD3	76	79.924	ENSCPOG00000037956	RPUSD3	86	74.426	Cavia_porcellus
ENSCCAG00000029530	RPUSD3	100	90.094	ENSCATG00000036939	RPUSD3	100	90.094	Cercocebus_atys
ENSCCAG00000029530	RPUSD3	100	88.319	ENSCSAG00000010506	RPUSD3	100	88.319	Chlorocebus_sabaeus
ENSCCAG00000029530	RPUSD3	53	83.036	ENSCHOG00000010151	-	67	84.127	Choloepus_hoffmanni
ENSCCAG00000029530	RPUSD3	74	57.085	ENSCPBG00000008825	RPUSD3	95	56.589	Chrysemys_picta_bellii
ENSCCAG00000029530	RPUSD3	100	90.094	ENSCANG00000040711	RPUSD3	100	90.094	Colobus_angolensis_palliatus
ENSCCAG00000029530	RPUSD3	96	74.925	ENSCGRG00001004923	Rpusd3	92	74.925	Cricetulus_griseus_chok1gshd
ENSCCAG00000029530	RPUSD3	96	74.925	ENSCGRG00000018315	Rpusd3	97	74.925	Cricetulus_griseus_crigri
ENSCCAG00000029530	RPUSD3	95	77.723	ENSDNOG00000039160	RPUSD3	87	78.419	Dasypus_novemcinctus
ENSCCAG00000029530	RPUSD3	81	72.101	ENSDORG00000026827	Rpusd3	92	77.358	Dipodomys_ordii
ENSCCAG00000029530	RPUSD3	100	72.034	ENSETEG00000006538	RPUSD3	99	72.034	Echinops_telfairi
ENSCCAG00000029530	RPUSD3	81	37.931	ENSEBUG00000015605	RPUSD3	67	39.806	Eptatretus_burgeri
ENSCCAG00000029530	RPUSD3	100	79.261	ENSEASG00005014160	RPUSD3	97	79.656	Equus_asinus_asinus
ENSCCAG00000029530	RPUSD3	100	79.830	ENSECAG00000019988	RPUSD3	97	80.229	Equus_caballus
ENSCCAG00000029530	RPUSD3	96	56.342	ENSEEUG00000007353	RPUSD3	96	56.342	Erinaceus_europaeus
ENSCCAG00000029530	RPUSD3	100	78.693	ENSFCAG00000014199	RPUSD3	100	78.693	Felis_catus
ENSCCAG00000029530	RPUSD3	78	52.015	ENSFALG00000012968	RPUSD3	99	49.451	Ficedula_albicollis
ENSCCAG00000029530	RPUSD3	73	83.871	ENSFDAG00000008350	RPUSD3	81	81.679	Fukomys_damarensis
ENSCCAG00000029530	RPUSD3	97	47.840	ENSGAGG00000007493	RPUSD3	95	48.615	Gopherus_agassizii
ENSCCAG00000029530	RPUSD3	100	91.038	ENSGGOG00000013120	RPUSD3	100	91.038	Gorilla_gorilla
ENSCCAG00000029530	RPUSD3	87	78.261	ENSHGLG00000011722	RPUSD3	74	79.381	Heterocephalus_glaber_female
ENSCCAG00000029530	RPUSD3	87	78.261	ENSHGLG00100016038	RPUSD3	74	79.381	Heterocephalus_glaber_male
ENSCCAG00000029530	RPUSD3	95	82.673	ENSSTOG00000002125	RPUSD3	100	75.706	Ictidomys_tridecemlineatus
ENSCCAG00000029530	RPUSD3	95	74.257	ENSJJAG00000012679	Rpusd3	96	73.414	Jaculus_jaculus
ENSCCAG00000029530	RPUSD3	94	83.000	ENSLAFG00000017501	RPUSD3	97	81.437	Loxodonta_africana
ENSCCAG00000029530	RPUSD3	100	88.604	ENSMFAG00000032407	RPUSD3	100	88.604	Macaca_fascicularis
ENSCCAG00000029530	RPUSD3	100	88.393	ENSMMUG00000010628	RPUSD3	97	91.640	Macaca_mulatta
ENSCCAG00000029530	RPUSD3	100	88.319	ENSMNEG00000040308	RPUSD3	100	88.319	Macaca_nemestrina
ENSCCAG00000029530	RPUSD3	100	90.094	ENSMLEG00000033940	RPUSD3	100	90.094	Mandrillus_leucophaeus
ENSCCAG00000029530	RPUSD3	95	75.375	ENSMAUG00000015473	Rpusd3	97	75.375	Mesocricetus_auratus
ENSCCAG00000029530	RPUSD3	99	81.517	ENSMICG00000002315	RPUSD3	100	79.651	Microcebus_murinus
ENSCCAG00000029530	RPUSD3	97	73.021	ENSMOCG00000022613	Rpusd3	99	73.021	Microtus_ochrogaster
ENSCCAG00000029530	RPUSD3	99	55.398	ENSMODG00000005210	RPUSD3	90	55.398	Monodelphis_domestica
ENSCCAG00000029530	RPUSD3	97	72.700	MGP_CAROLIEiJ_G0028725	Rpusd3	98	72.700	Mus_caroli
ENSCCAG00000029530	RPUSD3	97	72.997	ENSMUSG00000051169	Rpusd3	98	72.997	Mus_musculus
ENSCCAG00000029530	RPUSD3	97	72.997	MGP_PahariEiJ_G0022476	Rpusd3	98	72.997	Mus_pahari
ENSCCAG00000029530	RPUSD3	97	72.700	MGP_SPRETEiJ_G0029753	Rpusd3	98	72.700	Mus_spretus
ENSCCAG00000029530	RPUSD3	100	76.136	ENSMPUG00000017132	RPUSD3	100	76.136	Mustela_putorius_furo
ENSCCAG00000029530	RPUSD3	98	81.214	ENSMLUG00000006135	RPUSD3	99	81.214	Myotis_lucifugus
ENSCCAG00000029530	RPUSD3	96	75.150	ENSNGAG00000023704	Rpusd3	97	75.150	Nannospalax_galili
ENSCCAG00000029530	RPUSD3	100	91.038	ENSNLEG00000004214	RPUSD3	100	91.038	Nomascus_leucogenys
ENSCCAG00000029530	RPUSD3	75	67.816	ENSMEUG00000013098	-	100	67.816	Notamacropus_eugenii
ENSCCAG00000029530	RPUSD3	95	62.840	ENSOPRG00000002300	RPUSD3	94	62.840	Ochotona_princeps
ENSCCAG00000029530	RPUSD3	76	79.167	ENSODEG00000018137	RPUSD3	91	79.167	Octodon_degus
ENSCCAG00000029530	RPUSD3	84	53.371	ENSOANG00000012081	-	99	51.930	Ornithorhynchus_anatinus
ENSCCAG00000029530	RPUSD3	87	80.000	ENSOCUG00000027885	RPUSD3	100	66.667	Oryctolagus_cuniculus
ENSCCAG00000029530	RPUSD3	95	81.773	ENSOGAG00000012592	RPUSD3	100	82.166	Otolemur_garnettii
ENSCCAG00000029530	RPUSD3	95	83.663	ENSOARG00000005928	RPUSD3	99	79.202	Ovis_aries
ENSCCAG00000029530	RPUSD3	100	90.566	ENSPPAG00000038083	RPUSD3	100	90.566	Pan_paniscus
ENSCCAG00000029530	RPUSD3	100	78.977	ENSPPRG00000024433	RPUSD3	100	78.977	Panthera_pardus
ENSCCAG00000029530	RPUSD3	100	79.228	ENSPTIG00000006828	RPUSD3	100	79.942	Panthera_tigris_altaica
ENSCCAG00000029530	RPUSD3	100	91.038	ENSPTRG00000051760	RPUSD3	100	91.038	Pan_troglodytes
ENSCCAG00000029530	RPUSD3	100	90.094	ENSPANG00000023885	RPUSD3	100	90.094	Papio_anubis
ENSCCAG00000029530	RPUSD3	98	73.547	ENSPEMG00000017245	Rpusd3	100	73.547	Peromyscus_maniculatus_bairdii
ENSCCAG00000029530	RPUSD3	85	65.934	ENSPCIG00000021901	RPUSD3	84	65.172	Phascolarctos_cinereus
ENSCCAG00000029530	RPUSD3	100	88.319	ENSPPYG00000013676	RPUSD3	100	88.319	Pongo_abelii
ENSCCAG00000029530	RPUSD3	95	58.416	ENSPCAG00000013731	-	100	59.862	Procavia_capensis
ENSCCAG00000029530	RPUSD3	100	83.807	ENSPCOG00000018314	RPUSD3	100	83.807	Propithecus_coquereli
ENSCCAG00000029530	RPUSD3	100	78.754	ENSPVAG00000011107	RPUSD3	100	78.754	Pteropus_vampyrus
ENSCCAG00000029530	RPUSD3	95	72.871	ENSRNOG00000009084	Rpusd3	96	72.871	Rattus_norvegicus
ENSCCAG00000029530	RPUSD3	100	91.038	ENSRBIG00000041230	RPUSD3	100	91.038	Rhinopithecus_bieti
ENSCCAG00000029530	RPUSD3	100	91.038	ENSRROG00000043328	RPUSD3	100	91.038	Rhinopithecus_roxellana
ENSCCAG00000029530	RPUSD3	100	95.402	ENSSBOG00000036106	RPUSD3	100	95.402	Saimiri_boliviensis_boliviensis
ENSCCAG00000029530	RPUSD3	95	58.911	ENSSHAG00000015536	RPUSD3	99	60.390	Sarcophilus_harrisii
ENSCCAG00000029530	RPUSD3	100	78.409	ENSSSCG00000011555	RPUSD3	100	78.409	Sus_scrofa
ENSCCAG00000029530	RPUSD3	73	50.323	ENSTGUG00000008744	RPUSD3	93	53.456	Taeniopygia_guttata
ENSCCAG00000029530	RPUSD3	95	80.198	ENSTBEG00000000176	RPUSD3	100	75.862	Tupaia_belangeri
ENSCCAG00000029530	RPUSD3	95	83.744	ENSTTRG00000007544	RPUSD3	100	78.187	Tursiops_truncatus
ENSCCAG00000029530	RPUSD3	97	80.676	ENSUAMG00000011354	RPUSD3	98	80.892	Ursus_americanus
ENSCCAG00000029530	RPUSD3	100	77.841	ENSUMAG00000018830	RPUSD3	100	77.841	Ursus_maritimus
ENSCCAG00000029530	RPUSD3	99	79.621	ENSVVUG00000023735	RPUSD3	100	79.070	Vulpes_vulpes
ENSCCAG00000029530	RPUSD3	81	50.867	ENSXETG00000023546	rpusd3	99	51.064	Xenopus_tropicalis