EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000029710 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 3622 bases
Position: chrKV389757.1:1067909-1071530
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000023850	RRM_1	PF00076.22	7.8e-25	1	2
ENSCCAP00000023850	RRM_1	PF00076.22	7.8e-25	2	2
ENSCCAP00000023871	RRM_1	PF00076.22	1.3e-23	1	2
ENSCCAP00000023871	RRM_1	PF00076.22	1.3e-23	2	2
ENSCCAP00000023854	RRM_1	PF00076.22	1.5e-23	1	2
ENSCCAP00000023854	RRM_1	PF00076.22	1.5e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000041362	-	411	-	ENSCCAP00000023854	136 (aa)	-	A0A2K5R6W0
ENSCCAT00000041358	-	441	-	ENSCCAP00000023850	146 (aa)	-	A0A2K5R6W6
ENSCCAT00000041379	-	993	-	ENSCCAP00000023871	330 (aa)	-	A0A2K5R6U6

Gene Model

Click here to download ENSCCAG00000029710's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000029710's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000029710	-	100	77.622	ENSCCAG00000007508	-	100	77.622
ENSCCAG00000029710	-	100	79.720	ENSCCAG00000019303	RBM14	100	79.720
ENSCCAG00000029710	-	100	58.741	ENSCCAG00000021719	-	100	58.741
ENSCCAG00000029710	-	99	67.153	ENSCCAG00000023319	-	98	59.686
ENSCCAG00000029710	-	94	68.939	ENSCCAG00000024345	-	100	68.657
ENSCCAG00000029710	-	98	79.856	ENSCCAG00000016501	RBM4B	99	81.560
ENSCCAG00000029710	-	92	37.815	ENSCCAG00000034251	-	88	36.641

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000029710	-	99	75.912	ENSACAG00000007777	-	100	55.833	Anolis_carolinensis
ENSCCAG00000029710	-	96	70.803	ENSANAG00000033951	-	100	71.533	Aotus_nancymaae
ENSCCAG00000029710	-	96	67.153	ENSTSYG00000035012	-	92	68.116	Carlito_syrichta
ENSCCAG00000029710	-	96	81.022	ENSTSYG00000036089	-	89	80.142	Carlito_syrichta
ENSCCAG00000029710	-	99	71.429	ENSCANG00000043380	-	100	69.626	Colobus_angolensis_palliatus
ENSCCAG00000029710	-	98	66.197	ENSGGOG00000025398	-	99	67.361	Gorilla_gorilla
ENSCCAG00000029710	-	96	72.993	ENSHGLG00000007536	-	100	56.772	Heterocephalus_glaber_female
ENSCCAG00000029710	-	96	65.693	ENSHGLG00000003890	-	100	64.384	Heterocephalus_glaber_female
ENSCCAG00000029710	-	100	74.825	ENSHGLG00000007708	-	98	74.825	Heterocephalus_glaber_female
ENSCCAG00000029710	-	98	72.662	ENSHGLG00100011767	-	100	57.637	Heterocephalus_glaber_male
ENSCCAG00000029710	-	96	76.642	ENSHGLG00100012753	-	89	77.305	Heterocephalus_glaber_male
ENSCCAG00000029710	-	100	74.825	ENSHGLG00100011999	-	98	74.825	Heterocephalus_glaber_male
ENSCCAG00000029710	-	99	64.789	ENSJJAG00000014755	-	90	71.831	Jaculus_jaculus
ENSCCAG00000029710	-	96	81.022	ENSJJAG00000011978	-	87	80.142	Jaculus_jaculus
ENSCCAG00000029710	-	62	36.957	ENSLACG00000009547	-	89	36.957	Latimeria_chalumnae
ENSCCAG00000029710	-	96	73.723	ENSMFAG00000041731	-	93	70.968	Macaca_fascicularis
ENSCCAG00000029710	-	96	73.723	ENSMMUG00000003366	-	100	60.526	Macaca_mulatta
ENSCCAG00000029710	-	98	79.856	ENSMMUG00000010577	-	94	81.884	Macaca_mulatta
ENSCCAG00000029710	-	96	73.723	ENSMNEG00000036946	-	93	70.968	Macaca_nemestrina
ENSCCAG00000029710	-	96	73.723	ENSMLEG00000038589	-	93	69.585	Mandrillus_leucophaeus
ENSCCAG00000029710	-	96	81.022	ENSNGAG00000012575	-	100	81.295	Nannospalax_galili
ENSCCAG00000029710	-	100	61.449	ENSNLEG00000027654	-	100	59.420	Nomascus_leucogenys
ENSCCAG00000029710	-	95	59.451	ENSPPAG00000040796	-	100	59.451	Pan_paniscus
ENSCCAG00000029710	-	98	57.647	ENSPTRG00000046155	-	100	57.647	Pan_troglodytes
ENSCCAG00000029710	-	96	74.453	ENSPANG00000018676	-	91	76.056	Papio_anubis
ENSCCAG00000029710	-	96	81.022	ENSPCAG00000003414	-	100	67.313	Procavia_capensis
ENSCCAG00000029710	-	99	73.571	ENSRBIG00000035855	-	100	75.460	Rhinopithecus_bieti
ENSCCAG00000029710	-	99	73.571	ENSRROG00000038956	-	100	75.460	Rhinopithecus_roxellana
ENSCCAG00000029710	-	100	63.889	ENSSBOG00000025871	-	100	63.889	Saimiri_boliviensis_boliviensis
ENSCCAG00000029710	-	77	63.345	ENSSHAG00000008133	-	99	62.633	Sarcophilus_harrisii
ENSCCAG00000029710	-	99	75.182	ENSSPUG00000005889	-	93	74.468	Sphenodon_punctatus
ENSCCAG00000029710	-	96	81.022	ENSSSCG00000038304	-	100	73.259	Sus_scrofa
ENSCCAG00000029710	-	96	81.022	ENSUMAG00000011745	-	86	64.062	Ursus_maritimus