EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000029796 (Gene tree)
Gene ID: 108286936
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 9577 bases
Position: chrKV389758.1:2511419-2520995
Accession: 108286936
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000024023	MBD	PF01429.19	2.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000041534	MBD4-201	2303	XM_017505089	ENSCCAP00000024023	579 (aa)	XP_017360578	A0A2K5R7A4

Gene Model

Click here to download ENSCCAG00000029796's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000029796's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000029796	MBD4	100	89.157	ENSG00000129071	MBD4	100	89.157	Homo_sapiens
ENSCCAG00000029796	MBD4	65	52.459	ENSAPOG00000021668	mbd4	81	52.459	Acanthochromis_polyacanthus
ENSCCAG00000029796	MBD4	99	75.433	ENSAMEG00000004562	MBD4	99	75.433	Ailuropoda_melanoleuca
ENSCCAG00000029796	MBD4	53	58.400	ENSAOCG00000001157	mbd4	62	58.400	Amphiprion_ocellaris
ENSCCAG00000029796	MBD4	50	61.017	ENSAPEG00000016131	mbd4	61	61.017	Amphiprion_percula
ENSCCAG00000029796	MBD4	52	71.765	ENSAMXG00000017271	mbd4	56	71.765	Astyanax_mexicanus
ENSCCAG00000029796	MBD4	99	69.512	ENSBTAG00000021645	MBD4	100	69.512	Bos_taurus
ENSCCAG00000029796	MBD4	100	92.919	ENSCJAG00000017293	MBD4	100	92.919	Callithrix_jacchus
ENSCCAG00000029796	MBD4	99	75.043	ENSCAFG00000004867	MBD4	99	75.043	Canis_familiaris
ENSCCAG00000029796	MBD4	99	75.043	ENSCAFG00020007082	MBD4	99	75.043	Canis_lupus_dingo
ENSCCAG00000029796	MBD4	99	68.118	ENSCHIG00000009760	MBD4	100	68.118	Capra_hircus
ENSCCAG00000029796	MBD4	100	87.392	ENSCATG00000035211	MBD4	100	87.392	Cercocebus_atys
ENSCCAG00000029796	MBD4	96	69.479	ENSCLAG00000008974	MBD4	98	69.479	Chinchilla_lanigera
ENSCCAG00000029796	MBD4	100	87.392	ENSCSAG00000009037	MBD4	100	87.392	Chlorocebus_sabaeus
ENSCCAG00000029796	MBD4	86	50.487	ENSCPBG00000014704	MBD4	89	50.487	Chrysemys_picta_bellii
ENSCCAG00000029796	MBD4	100	87.565	ENSCANG00000007120	MBD4	100	87.565	Colobus_angolensis_palliatus
ENSCCAG00000029796	MBD4	99	65.854	ENSCGRG00001003507	Mbd4	100	66.202	Cricetulus_griseus_chok1gshd
ENSCCAG00000029796	MBD4	99	65.854	ENSCGRG00000010974	Mbd4	100	66.202	Cricetulus_griseus_crigri
ENSCCAG00000029796	MBD4	99	75.261	ENSDNOG00000049619	MBD4	100	75.261	Dasypus_novemcinctus
ENSCCAG00000029796	MBD4	81	63.597	ENSDORG00000000902	-	97	63.025	Dipodomys_ordii
ENSCCAG00000029796	MBD4	99	78.397	ENSEASG00005014800	MBD4	100	78.397	Equus_asinus_asinus
ENSCCAG00000029796	MBD4	99	78.397	ENSECAG00000022106	MBD4	100	78.397	Equus_caballus
ENSCCAG00000029796	MBD4	96	59.712	ENSEEUG00000011459	MBD4	99	60.072	Erinaceus_europaeus
ENSCCAG00000029796	MBD4	99	76.817	ENSFCAG00000000083	MBD4	99	76.817	Felis_catus
ENSCCAG00000029796	MBD4	82	44.124	ENSFALG00000013663	MBD4	99	44.400	Ficedula_albicollis
ENSCCAG00000029796	MBD4	86	50.877	ENSGAGG00000018644	MBD4	89	50.877	Gopherus_agassizii
ENSCCAG00000029796	MBD4	100	88.124	ENSGGOG00000010698	MBD4	100	88.124	Gorilla_gorilla
ENSCCAG00000029796	MBD4	96	71.813	ENSHGLG00000009034	MBD4	98	71.813	Heterocephalus_glaber_female
ENSCCAG00000029796	MBD4	96	71.813	ENSHGLG00100000135	MBD4	98	71.813	Heterocephalus_glaber_male
ENSCCAG00000029796	MBD4	99	70.261	ENSSTOG00000020663	MBD4	100	70.261	Ictidomys_tridecemlineatus
ENSCCAG00000029796	MBD4	85	40.237	ENSLBEG00000005669	MBD4	81	50.725	Labrus_bergylta
ENSCCAG00000029796	MBD4	99	73.310	ENSLAFG00000010609	MBD4	99	73.310	Loxodonta_africana
ENSCCAG00000029796	MBD4	100	86.874	ENSMFAG00000002266	MBD4	100	86.874	Macaca_fascicularis
ENSCCAG00000029796	MBD4	100	86.919	ENSMMUG00000012723	MBD4	100	86.919	Macaca_mulatta
ENSCCAG00000029796	MBD4	96	86.535	ENSMNEG00000029752	MBD4	99	86.535	Macaca_nemestrina
ENSCCAG00000029796	MBD4	100	87.219	ENSMLEG00000024859	MBD4	100	87.219	Mandrillus_leucophaeus
ENSCCAG00000029796	MBD4	100	80.311	ENSMICG00000008022	MBD4	100	80.311	Microcebus_murinus
ENSCCAG00000029796	MBD4	68	47.607	ENSMOCG00000002466	-	97	47.103	Microtus_ochrogaster
ENSCCAG00000029796	MBD4	86	59.839	ENSMODG00000006399	-	99	59.438	Monodelphis_domestica
ENSCCAG00000029796	MBD4	99	66.261	MGP_CAROLIEiJ_G0028760	Mbd4	100	66.261	Mus_caroli
ENSCCAG00000029796	MBD4	99	65.739	ENSMUSG00000030322	Mbd4	100	65.739	Mus_musculus
ENSCCAG00000029796	MBD4	99	65.625	MGP_PahariEiJ_G0022511	-	100	65.625	Mus_pahari
ENSCCAG00000029796	MBD4	99	65.217	MGP_SPRETEiJ_G0029788	Mbd4	100	65.217	Mus_spretus
ENSCCAG00000029796	MBD4	99	73.785	ENSMPUG00000017195	MBD4	99	73.785	Mustela_putorius_furo
ENSCCAG00000029796	MBD4	92	78.531	ENSMLUG00000014766	MBD4	97	78.531	Myotis_lucifugus
ENSCCAG00000029796	MBD4	100	88.601	ENSNLEG00000005337	MBD4	100	88.601	Nomascus_leucogenys
ENSCCAG00000029796	MBD4	50	100.000	ENSMEUG00000015599	-	77	100.000	Notamacropus_eugenii
ENSCCAG00000029796	MBD4	99	64.076	ENSOPRG00000000473	MBD4	99	64.076	Ochotona_princeps
ENSCCAG00000029796	MBD4	85	39.548	ENSONIG00000017212	mbd4	56	70.647	Oreochromis_niloticus
ENSCCAG00000029796	MBD4	72	44.208	ENSOANG00000004589	-	94	44.208	Ornithorhynchus_anatinus
ENSCCAG00000029796	MBD4	99	67.182	ENSOCUG00000013006	MBD4	100	67.182	Oryctolagus_cuniculus
ENSCCAG00000029796	MBD4	99	75.130	ENSOGAG00000010236	MBD4	100	75.130	Otolemur_garnettii
ENSCCAG00000029796	MBD4	99	68.293	ENSOARG00000014699	MBD4	100	68.293	Ovis_aries
ENSCCAG00000029796	MBD4	100	87.780	ENSPPAG00000036528	MBD4	100	87.780	Pan_paniscus
ENSCCAG00000029796	MBD4	99	75.779	ENSPPRG00000016480	MBD4	99	75.779	Panthera_pardus
ENSCCAG00000029796	MBD4	100	88.640	ENSPTRG00000015377	MBD4	100	88.640	Pan_troglodytes
ENSCCAG00000029796	MBD4	100	88.256	ENSPANG00000015047	MBD4	100	88.256	Papio_anubis
ENSCCAG00000029796	MBD4	86	49.811	ENSPSIG00000007892	MBD4	88	49.811	Pelodiscus_sinensis
ENSCCAG00000029796	MBD4	90	59.733	ENSPEMG00000006226	Mbd4	97	59.733	Peromyscus_maniculatus_bairdii
ENSCCAG00000029796	MBD4	92	56.562	ENSPCIG00000002276	-	100	56.192	Phascolarctos_cinereus
ENSCCAG00000029796	MBD4	100	87.565	ENSPPYG00000013417	MBD4	100	87.565	Pongo_abelii
ENSCCAG00000029796	MBD4	95	68.354	ENSPCAG00000012915	MBD4	99	68.354	Procavia_capensis
ENSCCAG00000029796	MBD4	99	77.336	ENSPVAG00000005238	MBD4	99	77.336	Pteropus_vampyrus
ENSCCAG00000029796	MBD4	99	65.744	ENSRNOG00000010919	Mbd4	100	65.744	Rattus_norvegicus
ENSCCAG00000029796	MBD4	100	88.083	ENSRBIG00000027722	MBD4	100	88.083	Rhinopithecus_bieti
ENSCCAG00000029796	MBD4	100	87.910	ENSRROG00000029136	MBD4	100	87.910	Rhinopithecus_roxellana
ENSCCAG00000029796	MBD4	99	93.414	ENSSBOG00000016810	MBD4	100	93.241	Saimiri_boliviensis_boliviensis
ENSCCAG00000029796	MBD4	93	55.638	ENSSHAG00000012953	MBD4	94	55.638	Sarcophilus_harrisii
ENSCCAG00000029796	MBD4	85	43.080	ENSSFOG00015016292	mbd4	95	43.333	Scleropages_formosus
ENSCCAG00000029796	MBD4	81	59.957	ENSSARG00000004496	-	80	59.957	Sorex_araneus
ENSCCAG00000029796	MBD4	86	50.487	ENSSPUG00000017344	MBD4	91	49.902	Sphenodon_punctatus
ENSCCAG00000029796	MBD4	99	73.043	ENSSSCG00000033303	MBD4	100	73.043	Sus_scrofa
ENSCCAG00000029796	MBD4	88	60.550	ENSTBEG00000003041	-	88	60.550	Tupaia_belangeri
ENSCCAG00000029796	MBD4	97	74.250	ENSTTRG00000011265	MBD4	100	74.250	Tursiops_truncatus
ENSCCAG00000029796	MBD4	86	78.112	ENSUAMG00000000814	MBD4	99	78.112	Ursus_americanus
ENSCCAG00000029796	MBD4	99	75.784	ENSUMAG00000017542	MBD4	100	75.784	Ursus_maritimus
ENSCCAG00000029796	MBD4	64	70.046	ENSVPAG00000004040	-	68	70.046	Vicugna_pacos
ENSCCAG00000029796	MBD4	99	75.390	ENSVVUG00000014222	MBD4	99	75.390	Vulpes_vulpes