EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000029828 (Gene tree)
Gene ID: 108311197
Gene Symbol: RRP1
Alias: D21S2056E|NNP-1|Nop52|RRP1A
Full Name: ribosomal RNA processing 1
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 16900 bases
Position: chrKV389538.1:2902410-2919309
Accession: 108311197
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000024084	Nop52	PF05997.12	2.7e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000041596	RRP1-201	2666	XM_017538543	ENSCCAP00000024084	461 (aa)	XP_017394032	A0A2K5R7I0

Gene Model

Click here to download ENSCCAG00000029828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000029828's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000029828	RRP1	80	51.697	ENSCCAG00000029384	RRP1B	64	48.182

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000029828	RRP1	100	90.497	ENSG00000160214	RRP1	100	100.000	Homo_sapiens
ENSCCAG00000029828	RRP1	80	51.031	ENSG00000160208	RRP1B	56	47.865	Homo_sapiens
ENSCCAG00000029828	RRP1	99	69.197	ENSAMEG00000011448	RRP1	98	69.892	Ailuropoda_melanoleuca
ENSCCAG00000029828	RRP1	78	50.685	ENSAMEG00000011401	RRP1B	58	47.418	Ailuropoda_melanoleuca
ENSCCAG00000029828	RRP1	61	50.350	ENSACIG00000019121	rrp1	63	47.239	Amphilophus_citrinellus
ENSCCAG00000029828	RRP1	84	47.301	ENSAOCG00000017894	-	83	47.368	Amphiprion_ocellaris
ENSCCAG00000029828	RRP1	74	52.890	ENSAPLG00000004310	RRP1B	53	50.130	Anas_platyrhynchos
ENSCCAG00000029828	RRP1	73	57.143	ENSACAG00000017851	RRP1B	51	52.393	Anolis_carolinensis
ENSCCAG00000029828	RRP1	94	47.682	ENSANAG00000034889	RRP1B	56	48.643	Aotus_nancymaae
ENSCCAG00000029828	RRP1	100	88.069	ENSANAG00000037815	RRP1	100	88.069	Aotus_nancymaae
ENSCCAG00000029828	RRP1	99	64.579	ENSBTAG00000003981	RRP1	99	65.443	Bos_taurus
ENSCCAG00000029828	RRP1	94	93.103	ENSCJAG00000043205	RRP1	89	93.088	Callithrix_jacchus
ENSCCAG00000029828	RRP1	80	49.740	ENSCJAG00000017077	RRP1B	56	46.485	Callithrix_jacchus
ENSCCAG00000029828	RRP1	99	68.996	ENSCAFG00000010646	RRP1	92	72.104	Canis_familiaris
ENSCCAG00000029828	RRP1	72	51.327	ENSCAFG00000010621	RRP1B	53	48.541	Canis_familiaris
ENSCCAG00000029828	RRP1	80	51.715	ENSCAFG00020018901	RRP1B	58	48.598	Canis_lupus_dingo
ENSCCAG00000029828	RRP1	99	68.996	ENSCAFG00020018979	RRP1	92	72.104	Canis_lupus_dingo
ENSCCAG00000029828	RRP1	99	65.443	ENSCHIG00000020948	RRP1	99	65.659	Capra_hircus
ENSCCAG00000029828	RRP1	77	49.863	ENSCHIG00000021519	RRP1B	54	47.772	Capra_hircus
ENSCCAG00000029828	RRP1	99	69.510	ENSTSYG00000012831	RRP1	99	70.488	Carlito_syrichta
ENSCCAG00000029828	RRP1	83	62.592	ENSCAPG00000008576	RRP1	99	63.814	Cavia_aperea
ENSCCAG00000029828	RRP1	99	65.116	ENSCPOG00000038986	RRP1	88	73.383	Cavia_porcellus
ENSCCAG00000029828	RRP1	74	50.704	ENSCPOG00000002396	RRP1B	62	44.053	Cavia_porcellus
ENSCCAG00000029828	RRP1	80	51.289	ENSCATG00000017423	RRP1B	56	48.090	Cercocebus_atys
ENSCCAG00000029828	RRP1	100	87.041	ENSCATG00000015632	RRP1	100	88.985	Cercocebus_atys
ENSCCAG00000029828	RRP1	89	71.831	ENSCLAG00000011639	RRP1	92	71.831	Chinchilla_lanigera
ENSCCAG00000029828	RRP1	72	92.121	ENSCSAG00000007936	RRP1	100	92.121	Chlorocebus_sabaeus
ENSCCAG00000029828	RRP1	80	51.309	ENSCSAG00000007961	RRP1B	56	48.064	Chlorocebus_sabaeus
ENSCCAG00000029828	RRP1	71	45.345	ENSCHOG00000002426	-	54	45.345	Choloepus_hoffmanni
ENSCCAG00000029828	RRP1	73	33.528	ENSCING00000003304	-	73	32.653	Ciona_intestinalis
ENSCCAG00000029828	RRP1	96	47.009	ENSCANG00000040952	RRP1B	56	48.081	Colobus_angolensis_palliatus
ENSCCAG00000029828	RRP1	91	74.347	ENSCANG00000042611	RRP1	85	73.986	Colobus_angolensis_palliatus
ENSCCAG00000029828	RRP1	71	54.054	ENSCGRG00001023882	-	55	66.667	Cricetulus_griseus_chok1gshd
ENSCCAG00000029828	RRP1	99	67.666	ENSCGRG00001011920	Rrp1	91	74.074	Cricetulus_griseus_chok1gshd
ENSCCAG00000029828	RRP1	71	53.372	ENSCGRG00001010889	-	53	49.265	Cricetulus_griseus_chok1gshd
ENSCCAG00000029828	RRP1	99	67.666	ENSCGRG00000008915	Rrp1	91	74.074	Cricetulus_griseus_crigri
ENSCCAG00000029828	RRP1	75	51.724	ENSCSEG00000020711	-	64	51.873	Cynoglossus_semilaevis
ENSCCAG00000029828	RRP1	75	46.000	ENSCVAG00000017568	-	89	46.197	Cyprinodon_variegatus
ENSCCAG00000029828	RRP1	73	46.866	ENSDARG00000103337	rrp1	54	43.299	Danio_rerio
ENSCCAG00000029828	RRP1	99	69.787	ENSDNOG00000019880	RRP1	99	69.362	Dasypus_novemcinctus
ENSCCAG00000029828	RRP1	90	62.998	ENSDORG00000002104	Rrp1	99	63.615	Dipodomys_ordii
ENSCCAG00000029828	RRP1	71	64.438	ENSETEG00000002963	-	99	52.711	Echinops_telfairi
ENSCCAG00000029828	RRP1	80	50.398	ENSEASG00005001687	RRP1B	56	48.700	Equus_asinus_asinus
ENSCCAG00000029828	RRP1	99	70.690	ENSEASG00005001673	RRP1	100	70.690	Equus_asinus_asinus
ENSCCAG00000029828	RRP1	80	50.133	ENSECAG00000018018	RRP1B	56	48.463	Equus_caballus
ENSCCAG00000029828	RRP1	99	71.121	ENSECAG00000015703	RRP1	100	71.121	Equus_caballus
ENSCCAG00000029828	RRP1	73	48.747	ENSELUG00000015885	-	87	50.153	Esox_lucius
ENSCCAG00000029828	RRP1	90	74.341	ENSFCAG00000008434	RRP1	92	72.581	Felis_catus
ENSCCAG00000029828	RRP1	62	57.895	ENSFALG00000002024	RRP1B	52	50.411	Ficedula_albicollis
ENSCCAG00000029828	RRP1	67	47.112	ENSFDAG00000010899	RRP1B	53	44.089	Fukomys_damarensis
ENSCCAG00000029828	RRP1	99	66.667	ENSFDAG00000013728	RRP1	97	70.159	Fukomys_damarensis
ENSCCAG00000029828	RRP1	82	54.450	ENSGALG00000035696	RRP1B	54	51.544	Gallus_gallus
ENSCCAG00000029828	RRP1	85	44.221	ENSGACG00000001438	rrp1	52	49.408	Gasterosteus_aculeatus
ENSCCAG00000029828	RRP1	74	60.234	ENSGAGG00000000375	RRP1B	56	52.184	Gopherus_agassizii
ENSCCAG00000029828	RRP1	80	51.031	ENSGGOG00000012069	RRP1B	56	47.865	Gorilla_gorilla
ENSCCAG00000029828	RRP1	100	88.337	ENSGGOG00000000173	RRP1	100	90.065	Gorilla_gorilla
ENSCCAG00000029828	RRP1	83	47.990	ENSHGLG00000004968	RRP1B	55	47.990	Heterocephalus_glaber_female
ENSCCAG00000029828	RRP1	90	69.121	ENSHGLG00000017085	RRP1	88	70.883	Heterocephalus_glaber_female
ENSCCAG00000029828	RRP1	89	39.212	ENSHCOG00000018388	-	54	39.167	Hippocampus_comes
ENSCCAG00000029828	RRP1	73	46.000	ENSIPUG00000000673	-	67	46.000	Ictalurus_punctatus
ENSCCAG00000029828	RRP1	93	71.689	ENSSTOG00000011116	RRP1	98	71.689	Ictidomys_tridecemlineatus
ENSCCAG00000029828	RRP1	72	52.786	ENSSTOG00000011790	RRP1B	57	49.034	Ictidomys_tridecemlineatus
ENSCCAG00000029828	RRP1	99	68.240	ENSJJAG00000018886	Rrp1	99	68.319	Jaculus_jaculus
ENSCCAG00000029828	RRP1	70	49.851	ENSJJAG00000021279	Rrp1b	54	46.411	Jaculus_jaculus
ENSCCAG00000029828	RRP1	72	48.406	ENSKMAG00000005539	rrp1	51	48.696	Kryptolebias_marmoratus
ENSCCAG00000029828	RRP1	74	46.133	ENSLBEG00000021417	RRP1	89	46.779	Labrus_bergylta
ENSCCAG00000029828	RRP1	87	50.725	ENSLACG00000017332	-	58	48.975	Latimeria_chalumnae
ENSCCAG00000029828	RRP1	74	50.142	ENSLOCG00000004064	-	53	47.301	Lepisosteus_oculatus
ENSCCAG00000029828	RRP1	77	53.168	ENSLAFG00000000766	RRP1B	85	53.168	Loxodonta_africana
ENSCCAG00000029828	RRP1	82	72.798	ENSLAFG00000022901	RRP1	99	65.957	Loxodonta_africana
ENSCCAG00000029828	RRP1	80	51.444	ENSMFAG00000039152	RRP1B	56	47.856	Macaca_fascicularis
ENSCCAG00000029828	RRP1	100	88.337	ENSMFAG00000003202	RRP1	100	87.905	Macaca_fascicularis
ENSCCAG00000029828	RRP1	100	88.337	ENSMMUG00000012304	RRP1	100	87.905	Macaca_mulatta
ENSCCAG00000029828	RRP1	80	51.289	ENSMMUG00000000104	RRP1B	57	47.778	Macaca_mulatta
ENSCCAG00000029828	RRP1	100	88.121	ENSMNEG00000031210	RRP1	100	87.689	Macaca_nemestrina
ENSCCAG00000029828	RRP1	80	51.289	ENSMNEG00000034269	RRP1B	56	47.778	Macaca_nemestrina
ENSCCAG00000029828	RRP1	72	50.286	ENSMLEG00000040044	RRP1B	53	46.929	Mandrillus_leucophaeus
ENSCCAG00000029828	RRP1	92	86.085	ENSMLEG00000037797	RRP1	99	87.972	Mandrillus_leucophaeus
ENSCCAG00000029828	RRP1	82	54.188	ENSMGAG00000014591	RRP1B	55	52.019	Meleagris_gallopavo
ENSCCAG00000029828	RRP1	86	62.624	ENSMAUG00000017653	Rrp1	96	59.624	Mesocricetus_auratus
ENSCCAG00000029828	RRP1	99	73.978	ENSMICG00000004700	RRP1	99	74.194	Microcebus_murinus
ENSCCAG00000029828	RRP1	77	53.297	ENSMICG00000004686	RRP1B	56	49.881	Microcebus_murinus
ENSCCAG00000029828	RRP1	99	53.755	ENSMOCG00000015687	Rrp1	99	56.367	Microtus_ochrogaster
ENSCCAG00000029828	RRP1	71	48.844	ENSMOCG00000001117	Rrp1b	53	43.885	Microtus_ochrogaster
ENSCCAG00000029828	RRP1	74	45.507	ENSMMOG00000019175	rrp1	98	42.821	Mola_mola
ENSCCAG00000029828	RRP1	74	55.263	ENSMODG00000021033	RRP1B	52	51.861	Monodelphis_domestica
ENSCCAG00000029828	RRP1	75	63.689	ENSMODG00000021036	-	53	60.533	Monodelphis_domestica
ENSCCAG00000029828	RRP1	74	50.437	ENSMALG00000010310	rrp1	88	50.437	Monopterus_albus
ENSCCAG00000029828	RRP1	71	50.000	MGP_CAROLIEiJ_G0021376	Rrp1b	53	63.492	Mus_caroli
ENSCCAG00000029828	RRP1	99	59.615	MGP_CAROLIEiJ_G0015508	Rrp1	99	61.963	Mus_caroli
ENSCCAG00000029828	RRP1	71	51.183	ENSMUSG00000058392	Rrp1b	53	65.079	Mus_musculus
ENSCCAG00000029828	RRP1	99	59.417	ENSMUSG00000061032	Rrp1	99	61.663	Mus_musculus
ENSCCAG00000029828	RRP1	99	59.542	MGP_PahariEiJ_G0030921	Rrp1	99	62.118	Mus_pahari
ENSCCAG00000029828	RRP1	71	51.775	MGP_PahariEiJ_G0023695	Rrp1b	53	63.492	Mus_pahari
ENSCCAG00000029828	RRP1	99	81.200	MGP_SPRETEiJ_G0016321	Rrp1	99	60.736	Mus_spretus
ENSCCAG00000029828	RRP1	71	51.775	MGP_SPRETEiJ_G0022290	Rrp1b	53	65.079	Mus_spretus
ENSCCAG00000029828	RRP1	60	53.147	ENSMPUG00000009810	RRP1B	60	45.812	Mustela_putorius_furo
ENSCCAG00000029828	RRP1	84	68.265	ENSMPUG00000009826	RRP1	96	65.605	Mustela_putorius_furo
ENSCCAG00000029828	RRP1	88	92.576	ENSMLUG00000017788	RRP1	99	65.759	Myotis_lucifugus
ENSCCAG00000029828	RRP1	92	48.292	ENSMLUG00000007738	RRP1B	58	48.292	Myotis_lucifugus
ENSCCAG00000029828	RRP1	80	49.086	ENSNGAG00000021073	Rrp1b	52	48.148	Nannospalax_galili
ENSCCAG00000029828	RRP1	86	54.788	ENSNGAG00000022344	Rrp1	93	55.902	Nannospalax_galili
ENSCCAG00000029828	RRP1	100	89.417	ENSNLEG00000034734	RRP1	100	89.417	Nomascus_leucogenys
ENSCCAG00000029828	RRP1	80	51.289	ENSNLEG00000001490	RRP1B	58	48.081	Nomascus_leucogenys
ENSCCAG00000029828	RRP1	58	69.912	ENSMEUG00000003226	-	56	69.912	Notamacropus_eugenii
ENSCCAG00000029828	RRP1	79	66.391	ENSOPRG00000001319	RRP1	100	67.493	Ochotona_princeps
ENSCCAG00000029828	RRP1	72	61.493	ENSOANG00000006472	-	99	54.667	Ornithorhynchus_anatinus
ENSCCAG00000029828	RRP1	82	50.129	ENSOANG00000006470	RRP1B	57	46.818	Ornithorhynchus_anatinus
ENSCCAG00000029828	RRP1	63	60.345	ENSOCUG00000022843	-	99	55.300	Oryctolagus_cuniculus
ENSCCAG00000029828	RRP1	99	72.747	ENSOGAG00000006105	RRP1	99	73.391	Otolemur_garnettii
ENSCCAG00000029828	RRP1	72	54.545	ENSOGAG00000009872	RRP1B	62	48.910	Otolemur_garnettii
ENSCCAG00000029828	RRP1	72	47.429	ENSOARG00000011314	RRP1B	55	45.897	Ovis_aries
ENSCCAG00000029828	RRP1	99	62.338	ENSOARG00000011434	RRP1	99	62.156	Ovis_aries
ENSCCAG00000029828	RRP1	72	50.000	ENSPPAG00000035319	RRP1B	53	46.914	Pan_paniscus
ENSCCAG00000029828	RRP1	100	90.713	ENSPPAG00000029050	RRP1	100	90.713	Pan_paniscus
ENSCCAG00000029828	RRP1	77	51.801	ENSPPRG00000010356	RRP1B	54	49.507	Panthera_pardus
ENSCCAG00000029828	RRP1	90	73.861	ENSPPRG00000010656	RRP1	92	72.018	Panthera_pardus
ENSCCAG00000029828	RRP1	84	60.500	ENSPTIG00000019473	RRP1	88	60.750	Panthera_tigris_altaica
ENSCCAG00000029828	RRP1	68	50.464	ENSPTIG00000016894	RRP1B	63	46.753	Panthera_tigris_altaica
ENSCCAG00000029828	RRP1	100	90.929	ENSPTRG00000013962	RRP1	100	90.929	Pan_troglodytes
ENSCCAG00000029828	RRP1	80	51.031	ENSPTRG00000013958	RRP1B	56	48.081	Pan_troglodytes
ENSCCAG00000029828	RRP1	80	51.289	ENSPANG00000011090	RRP1B	56	48.090	Papio_anubis
ENSCCAG00000029828	RRP1	100	86.825	ENSPANG00000015097	RRP1	100	88.553	Papio_anubis
ENSCCAG00000029828	RRP1	74	47.578	ENSPKIG00000003422	-	52	43.357	Paramormyrops_kingsleyae
ENSCCAG00000029828	RRP1	77	57.660	ENSPSIG00000008152	RRP1B	52	51.606	Pelodiscus_sinensis
ENSCCAG00000029828	RRP1	74	41.360	ENSPMGG00000007512	-	84	40.563	Periophthalmus_magnuspinnatus
ENSCCAG00000029828	RRP1	71	51.506	ENSPEMG00000022490	Rrp1b	54	46.829	Peromyscus_maniculatus_bairdii
ENSCCAG00000029828	RRP1	86	75.062	ENSPEMG00000018421	Rrp1	91	75.622	Peromyscus_maniculatus_bairdii
ENSCCAG00000029828	RRP1	80	52.895	ENSPCIG00000015513	RRP1B	60	49.103	Phascolarctos_cinereus
ENSCCAG00000029828	RRP1	99	53.586	ENSPCIG00000015523	-	91	57.243	Phascolarctos_cinereus
ENSCCAG00000029828	RRP1	80	51.031	ENSPPYG00000011470	RRP1B	56	47.640	Pongo_abelii
ENSCCAG00000029828	RRP1	100	89.633	ENSPPYG00000011474	RRP1	100	89.633	Pongo_abelii
ENSCCAG00000029828	RRP1	78	58.889	ENSPCAG00000008370	-	100	58.777	Procavia_capensis
ENSCCAG00000029828	RRP1	80	52.618	ENSPCOG00000017927	RRP1B	57	50.474	Propithecus_coquereli
ENSCCAG00000029828	RRP1	99	70.149	ENSPCOG00000017706	RRP1	99	71.002	Propithecus_coquereli
ENSCCAG00000029828	RRP1	83	62.143	ENSPVAG00000009925	-	81	62.143	Pteropus_vampyrus
ENSCCAG00000029828	RRP1	99	65.227	ENSRNOG00000001203	Rrp1	98	66.595	Rattus_norvegicus
ENSCCAG00000029828	RRP1	71	50.000	ENSRNOG00000001194	Rrp1b	58	44.989	Rattus_norvegicus
ENSCCAG00000029828	RRP1	100	85.961	ENSRBIG00000032082	RRP1	100	87.905	Rhinopithecus_bieti
ENSCCAG00000029828	RRP1	80	45.103	ENSRBIG00000041689	RRP1B	55	42.697	Rhinopithecus_bieti
ENSCCAG00000029828	RRP1	80	51.289	ENSRROG00000031499	RRP1B	61	48.090	Rhinopithecus_roxellana
ENSCCAG00000029828	RRP1	100	86.393	ENSRROG00000039799	RRP1	100	88.337	Rhinopithecus_roxellana
ENSCCAG00000029828	RRP1	99	89.130	ENSSBOG00000034689	RRP1	100	89.130	Saimiri_boliviensis_boliviensis
ENSCCAG00000029828	RRP1	83	43.721	ENSSBOG00000034727	RRP1B	55	43.721	Saimiri_boliviensis_boliviensis
ENSCCAG00000029828	RRP1	70	61.846	ENSSHAG00000010304	-	96	62.222	Sarcophilus_harrisii
ENSCCAG00000029828	RRP1	74	55.102	ENSSHAG00000017789	RRP1B	56	47.973	Sarcophilus_harrisii
ENSCCAG00000029828	RRP1	67	44.411	ENSSFOG00015003932	-	58	41.689	Scleropages_formosus
ENSCCAG00000029828	RRP1	74	49.573	ENSSMAG00000016847	-	80	50.152	Scophthalmus_maximus
ENSCCAG00000029828	RRP1	73	56.196	ENSSPUG00000002834	RRP1B	54	50.117	Sphenodon_punctatus
ENSCCAG00000029828	RRP1	99	68.387	ENSSSCG00000037061	RRP1	99	68.884	Sus_scrofa
ENSCCAG00000029828	RRP1	77	53.005	ENSSSCG00000021698	RRP1B	61	50.000	Sus_scrofa
ENSCCAG00000029828	RRP1	65	57.616	ENSTGUG00000005926	RRP1B	51	52.304	Taeniopygia_guttata
ENSCCAG00000029828	RRP1	74	51.297	ENSTRUG00000017592	rrp1	97	51.297	Takifugu_rubripes
ENSCCAG00000029828	RRP1	74	48.688	ENSTNIG00000005053	rrp1	54	50.000	Tetraodon_nigroviridis
ENSCCAG00000029828	RRP1	69	78.710	ENSTBEG00000001260	-	65	78.621	Tupaia_belangeri
ENSCCAG00000029828	RRP1	77	49.046	ENSTBEG00000000422	RRP1B	62	49.046	Tupaia_belangeri
ENSCCAG00000029828	RRP1	80	50.794	ENSTTRG00000000723	RRP1B	58	47.529	Tursiops_truncatus
ENSCCAG00000029828	RRP1	69	75.980	ENSTTRG00000011162	RRP1	84	75.980	Tursiops_truncatus
ENSCCAG00000029828	RRP1	73	60.983	ENSUAMG00000014189	-	97	62.209	Ursus_americanus
ENSCCAG00000029828	RRP1	80	51.467	ENSUAMG00000026765	RRP1B	62	49.409	Ursus_americanus
ENSCCAG00000029828	RRP1	72	50.148	ENSUMAG00000025510	RRP1B	65	50.148	Ursus_maritimus
ENSCCAG00000029828	RRP1	90	66.825	ENSUMAG00000025507	RRP1	98	66.915	Ursus_maritimus
ENSCCAG00000029828	RRP1	72	51.471	ENSVVUG00000024509	RRP1B	53	48.677	Vulpes_vulpes
ENSCCAG00000029828	RRP1	69	57.862	ENSVVUG00000024498	-	70	62.324	Vulpes_vulpes
ENSCCAG00000029828	RRP1	70	51.713	ENSXETG00000013683	rrp1b	61	46.482	Xenopus_tropicalis