EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000030041 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: X-ray repair cross-complementing protein 6 pseudogene
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 1923 bases
Position: chrKV389543.1:2251557-2253479
Accession: 108311527
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000024486	SAP	PF02037.27	6.1e-09	1	1
ENSCCAP00000024481	SAP	PF02037.27	1.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000041995	-	1896	-	ENSCCAP00000024481	631 (aa)	-	A0A2K5R8L1
ENSCCAT00000042000	-	789	-	ENSCCAP00000024486	262 (aa)	-	A0A2K5R8L4

Gene Model

Click here to download ENSCCAG00000030041's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000030041's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000030041	-	87	91.562	ENSCCAG00000030468	-	100	91.562
ENSCCAG00000030041	-	98	76.677	ENSCCAG00000037663	-	100	76.198
ENSCCAG00000030041	-	95	75.534	ENSCCAG00000035711	-	100	75.534

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000030041	-	95	92.447	ENSG00000196419	XRCC6	100	92.447	Homo_sapiens
ENSCCAG00000030041	-	94	53.125	ENSAPOG00000012704	xrcc6	99	53.454	Acanthochromis_polyacanthus
ENSCCAG00000030041	-	94	53.125	ENSACIG00000021277	xrcc6	99	53.289	Amphilophus_citrinellus
ENSCCAG00000030041	-	94	51.888	ENSAOCG00000021344	xrcc6	99	52.053	Amphiprion_ocellaris
ENSCCAG00000030041	-	94	52.381	ENSAPEG00000020712	xrcc6	99	52.545	Amphiprion_percula
ENSCCAG00000030041	-	94	52.632	ENSATEG00000007119	xrcc6	99	52.796	Anabas_testudineus
ENSCCAG00000030041	-	87	67.877	ENSAPLG00000004469	XRCC6	99	67.877	Anas_platyrhynchos
ENSCCAG00000030041	-	95	79.805	ENSANAG00000023445	-	100	81.385	Aotus_nancymaae
ENSCCAG00000030041	-	95	83.580	ENSANAG00000020017	-	100	88.312	Aotus_nancymaae
ENSCCAG00000030041	-	95	93.432	ENSANAG00000018684	XRCC6	99	94.495	Aotus_nancymaae
ENSCCAG00000030041	-	95	82.266	ENSANAG00000035230	-	100	82.266	Aotus_nancymaae
ENSCCAG00000030041	-	94	53.454	ENSACLG00000018608	xrcc6	99	53.454	Astatotilapia_calliptera
ENSCCAG00000030041	-	95	54.235	ENSAMXG00000007545	xrcc6	99	54.235	Astyanax_mexicanus
ENSCCAG00000030041	-	88	93.506	ENSCJAG00000040177	-	100	93.506	Callithrix_jacchus
ENSCCAG00000030041	-	95	93.596	ENSCJAG00000045512	XRCC6	100	93.596	Callithrix_jacchus
ENSCCAG00000030041	-	68	95.531	ENSCJAG00000039518	-	85	95.531	Callithrix_jacchus
ENSCCAG00000030041	-	88	91.342	ENSCJAG00000044926	-	100	91.342	Callithrix_jacchus
ENSCCAG00000030041	-	88	93.506	ENSCJAG00000043192	-	100	93.506	Callithrix_jacchus
ENSCCAG00000030041	-	95	81.579	ENSTSYG00000011348	XRCC6	99	81.579	Carlito_syrichta
ENSCCAG00000030041	-	95	92.939	ENSCATG00000042366	XRCC6	100	92.939	Cercocebus_atys
ENSCCAG00000030041	-	95	80.890	ENSCLAG00000016669	XRCC6	99	81.054	Chinchilla_lanigera
ENSCCAG00000030041	-	95	92.939	ENSCSAG00000005784	XRCC6	100	92.939	Chlorocebus_sabaeus
ENSCCAG00000030041	-	95	69.608	ENSCPBG00000020535	XRCC6	100	69.771	Chrysemys_picta_bellii
ENSCCAG00000030041	-	90	34.542	ENSCING00000000633	-	95	34.542	Ciona_intestinalis
ENSCCAG00000030041	-	82	39.171	ENSCSAVG00000000984	-	99	41.494	Ciona_savignyi
ENSCCAG00000030041	-	95	92.939	ENSCANG00000031032	XRCC6	100	92.939	Colobus_angolensis_palliatus
ENSCCAG00000030041	-	95	72.697	ENSCGRG00001019029	Xrcc6	99	72.862	Cricetulus_griseus_chok1gshd
ENSCCAG00000030041	-	95	80.263	ENSCGRG00000001528	Xrcc6	99	80.428	Cricetulus_griseus_crigri
ENSCCAG00000030041	-	95	52.778	ENSCSEG00000020434	xrcc6	99	52.941	Cynoglossus_semilaevis
ENSCCAG00000030041	-	94	53.038	ENSCVAG00000002189	xrcc6	99	53.279	Cyprinodon_variegatus
ENSCCAG00000030041	-	94	54.754	ENSDARG00000071551	xrcc6	99	55.082	Danio_rerio
ENSCCAG00000030041	-	83	64.977	ENSETEG00000015333	-	78	71.290	Echinops_telfairi
ENSCCAG00000030041	-	95	81.250	ENSEASG00005001514	XRCC6	99	81.743	Equus_asinus_asinus
ENSCCAG00000030041	-	95	80.757	ENSECAG00000017563	XRCC6	99	82.703	Equus_caballus
ENSCCAG00000030041	-	95	51.792	ENSELUG00000020301	xrcc6	100	51.792	Esox_lucius
ENSCCAG00000030041	-	95	65.957	ENSFALG00000011908	XRCC6	97	66.121	Ficedula_albicollis
ENSCCAG00000030041	-	95	53.595	ENSFHEG00000016833	xrcc6	99	54.085	Fundulus_heteroclitus
ENSCCAG00000030041	-	84	53.333	ENSGMOG00000013524	xrcc6	88	53.333	Gadus_morhua
ENSCCAG00000030041	-	95	65.957	ENSGALG00000011932	XRCC6	99	65.957	Gallus_gallus
ENSCCAG00000030041	-	95	51.311	ENSGAFG00000008130	xrcc6	99	51.639	Gambusia_affinis
ENSCCAG00000030041	-	94	50.492	ENSGACG00000004868	xrcc6	99	50.656	Gasterosteus_aculeatus
ENSCCAG00000030041	-	95	69.558	ENSGAGG00000017518	XRCC6	100	69.722	Gopherus_agassizii
ENSCCAG00000030041	-	88	88.412	ENSGGOG00000026303	-	100	88.412	Gorilla_gorilla
ENSCCAG00000030041	-	95	92.447	ENSGGOG00000015885	XRCC6	100	92.447	Gorilla_gorilla
ENSCCAG00000030041	-	87	54.234	ENSHBUG00000023281	xrcc6	98	54.430	Haplochromis_burtoni
ENSCCAG00000030041	-	95	79.242	ENSHGLG00000018078	XRCC6	99	79.407	Heterocephalus_glaber_female
ENSCCAG00000030041	-	95	79.242	ENSHGLG00100011264	XRCC6	99	79.407	Heterocephalus_glaber_male
ENSCCAG00000030041	-	94	50.822	ENSHCOG00000009821	xrcc6	99	50.984	Hippocampus_comes
ENSCCAG00000030041	-	95	53.431	ENSIPUG00000000767	xrcc6	99	53.431	Ictalurus_punctatus
ENSCCAG00000030041	-	95	83.717	ENSSTOG00000009490	XRCC6	99	84.046	Ictidomys_tridecemlineatus
ENSCCAG00000030041	-	95	74.836	ENSJJAG00000017136	Xrcc6	99	75.822	Jaculus_jaculus
ENSCCAG00000030041	-	94	52.217	ENSKMAG00000002141	xrcc6	99	52.381	Kryptolebias_marmoratus
ENSCCAG00000030041	-	94	52.053	ENSLBEG00000002691	xrcc6	99	52.451	Labrus_bergylta
ENSCCAG00000030041	-	79	56.863	ENSLOCG00000011533	xrcc6	99	56.863	Lepisosteus_oculatus
ENSCCAG00000030041	-	95	92.939	ENSMFAG00000003352	XRCC6	100	92.939	Macaca_fascicularis
ENSCCAG00000030041	-	95	92.939	ENSMMUG00000001856	XRCC6	100	92.939	Macaca_mulatta
ENSCCAG00000030041	-	95	92.939	ENSMNEG00000035076	XRCC6	99	94.505	Macaca_nemestrina
ENSCCAG00000030041	-	95	92.939	ENSMLEG00000019869	XRCC6	100	92.939	Mandrillus_leucophaeus
ENSCCAG00000030041	-	94	51.639	ENSMAMG00000003368	xrcc6	99	52.623	Mastacembelus_armatus
ENSCCAG00000030041	-	90	52.316	ENSMAMG00000003405	xrcc6	96	52.316	Mastacembelus_armatus
ENSCCAG00000030041	-	94	53.454	ENSMZEG00005028080	xrcc6	99	52.961	Maylandia_zebra
ENSCCAG00000030041	-	95	65.466	ENSMGAG00000012146	XRCC6	99	65.416	Meleagris_gallopavo
ENSCCAG00000030041	-	95	79.934	ENSMAUG00000017340	Xrcc6	99	80.099	Mesocricetus_auratus
ENSCCAG00000030041	-	95	79.605	ENSMOCG00000015717	Xrcc6	99	79.934	Microtus_ochrogaster
ENSCCAG00000030041	-	94	52.217	ENSMMOG00000003536	xrcc6	99	52.217	Mola_mola
ENSCCAG00000030041	-	94	53.783	ENSMALG00000013912	xrcc6	94	53.947	Monopterus_albus
ENSCCAG00000030041	-	95	72.862	MGP_CAROLIEiJ_G0020067	Xrcc6	99	73.026	Mus_caroli
ENSCCAG00000030041	-	95	78.454	ENSMUSG00000022471	Xrcc6	99	78.618	Mus_musculus
ENSCCAG00000030041	-	95	77.632	MGP_PahariEiJ_G0020069	Xrcc6	99	77.796	Mus_pahari
ENSCCAG00000030041	-	91	78.803	MGP_SPRETEiJ_G0020967	Xrcc6	99	79.174	Mus_spretus
ENSCCAG00000030041	-	95	79.112	ENSNGAG00000013750	Xrcc6	99	79.276	Nannospalax_galili
ENSCCAG00000030041	-	94	53.618	ENSNBRG00000004125	xrcc6	99	53.618	Neolamprologus_brichardi
ENSCCAG00000030041	-	88	90.043	ENSNLEG00000034343	-	100	90.043	Nomascus_leucogenys
ENSCCAG00000030041	-	90	79.138	ENSOPRG00000002386	XRCC6	99	79.138	Ochotona_princeps
ENSCCAG00000030041	-	95	77.924	ENSODEG00000015847	XRCC6	99	78.089	Octodon_degus
ENSCCAG00000030041	-	95	53.344	ENSONIG00000019715	xrcc6	99	53.344	Oreochromis_niloticus
ENSCCAG00000030041	-	83	76.037	ENSOANG00000011328	XRCC6	99	77.184	Ornithorhynchus_anatinus
ENSCCAG00000030041	-	95	80.788	ENSOCUG00000006948	XRCC6	100	81.117	Oryctolagus_cuniculus
ENSCCAG00000030041	-	95	51.713	ENSORLG00020007820	xrcc6	99	52.039	Oryzias_latipes_hni
ENSCCAG00000030041	-	95	51.387	ENSORLG00015006406	xrcc6	99	51.713	Oryzias_latipes_hsok
ENSCCAG00000030041	-	95	51.550	ENSOMEG00000008998	xrcc6	99	51.876	Oryzias_melastigma
ENSCCAG00000030041	-	95	82.566	ENSOGAG00000008821	XRCC6	99	82.895	Otolemur_garnettii
ENSCCAG00000030041	-	88	89.610	ENSPPAG00000043936	-	100	89.610	Pan_paniscus
ENSCCAG00000030041	-	83	94.954	ENSPPAG00000037167	XRCC6	100	74.711	Pan_paniscus
ENSCCAG00000030041	-	95	92.447	ENSPTRG00000022548	XRCC6	100	92.991	Pan_troglodytes
ENSCCAG00000030041	-	88	89.610	ENSPTRG00000043309	-	100	89.610	Pan_troglodytes
ENSCCAG00000030041	-	95	92.447	ENSPTRG00000045824	XRCC6	100	92.991	Pan_troglodytes
ENSCCAG00000030041	-	88	89.610	ENSPTRG00000040111	-	100	89.610	Pan_troglodytes
ENSCCAG00000030041	-	95	92.775	ENSPANG00000001252	XRCC6	99	96.537	Papio_anubis
ENSCCAG00000030041	-	94	57.072	ENSPKIG00000003974	xrcc6	99	57.213	Paramormyrops_kingsleyae
ENSCCAG00000030041	-	84	70.909	ENSPSIG00000016499	-	100	70.428	Pelodiscus_sinensis
ENSCCAG00000030041	-	94	52.815	ENSPMGG00000014220	xrcc6	100	52.980	Periophthalmus_magnuspinnatus
ENSCCAG00000030041	-	95	78.783	ENSPEMG00000023446	Xrcc6	99	78.947	Peromyscus_maniculatus_bairdii
ENSCCAG00000030041	-	95	74.590	ENSPCIG00000026409	XRCC6	99	74.918	Phascolarctos_cinereus
ENSCCAG00000030041	-	95	51.634	ENSPFOG00000017173	xrcc6	99	52.124	Poecilia_formosa
ENSCCAG00000030041	-	95	51.307	ENSPLAG00000000562	xrcc6	99	51.797	Poecilia_latipinna
ENSCCAG00000030041	-	95	51.797	ENSPMEG00000018478	xrcc6	99	52.288	Poecilia_mexicana
ENSCCAG00000030041	-	95	51.792	ENSPREG00000020957	xrcc6	93	51.792	Poecilia_reticulata
ENSCCAG00000030041	-	95	82.759	ENSPPYG00000011876	XRCC6	100	80.624	Pongo_abelii
ENSCCAG00000030041	-	95	79.770	ENSPVAG00000001168	XRCC6	99	79.934	Pteropus_vampyrus
ENSCCAG00000030041	-	94	53.454	ENSPNYG00000003815	xrcc6	99	50.704	Pundamilia_nyererei
ENSCCAG00000030041	-	95	78.454	ENSRNOG00000006392	Xrcc6	99	78.783	Rattus_norvegicus
ENSCCAG00000030041	-	95	86.371	ENSRBIG00000039794	XRCC6	100	86.371	Rhinopithecus_bieti
ENSCCAG00000030041	-	95	92.939	ENSRROG00000030297	XRCC6	100	92.939	Rhinopithecus_roxellana
ENSCCAG00000030041	-	88	88.312	ENSRROG00000037576	-	100	88.312	Rhinopithecus_roxellana
ENSCCAG00000030041	-	88	79.654	ENSSBOG00000025802	-	100	79.654	Saimiri_boliviensis_boliviensis
ENSCCAG00000030041	-	83	95.413	ENSSBOG00000024724	-	100	81.818	Saimiri_boliviensis_boliviensis
ENSCCAG00000030041	-	95	74.056	ENSSHAG00000010790	XRCC6	99	74.384	Sarcophilus_harrisii
ENSCCAG00000030041	-	94	56.885	ENSSFOG00015014409	xrcc6	99	56.885	Scleropages_formosus
ENSCCAG00000030041	-	94	53.125	ENSSMAG00000006496	xrcc6	99	53.289	Scophthalmus_maximus
ENSCCAG00000030041	-	95	52.941	ENSSDUG00000007542	xrcc6	99	53.105	Seriola_dumerili
ENSCCAG00000030041	-	95	52.124	ENSSLDG00000009974	xrcc6	99	52.288	Seriola_lalandi_dorsalis
ENSCCAG00000030041	-	95	69.787	ENSSPUG00000012086	XRCC6	99	70.230	Sphenodon_punctatus
ENSCCAG00000030041	-	95	53.105	ENSSPAG00000015199	xrcc6	99	53.268	Stegastes_partitus
ENSCCAG00000030041	-	91	68.041	ENSTGUG00000009852	-	99	66.667	Taeniopygia_guttata
ENSCCAG00000030041	-	94	51.645	ENSTRUG00000017070	xrcc6	99	51.974	Takifugu_rubripes
ENSCCAG00000030041	-	90	53.390	ENSTNIG00000012947	xrcc6	99	53.390	Tetraodon_nigroviridis
ENSCCAG00000030041	-	91	74.527	ENSTBEG00000011736	XRCC6	99	74.527	Tupaia_belangeri
ENSCCAG00000030041	-	95	66.941	ENSTTRG00000006749	XRCC6	99	67.434	Tursiops_truncatus
ENSCCAG00000030041	-	95	51.634	ENSXMAG00000009691	xrcc6	99	52.124	Xiphophorus_maculatus