EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000030115 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: nucleolar GTP-binding protein 1 pseudogene
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 1887 bases
Position: chrKV389457.1:7291631-7293517
Accession: 108300986
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000024666	NOG1	PF06858.14	2.6e-22	1	1
ENSCCAP00000024658	NOG1	PF06858.14	2.8e-22	1	1
ENSCCAP00000024666	MMR_HSR1	PF01926.23	1.5e-07	1	1
ENSCCAP00000024658	MMR_HSR1	PF01926.23	1.6e-07	1	1
ENSCCAP00000024658	NOGCT	PF08155.11	4.9e-20	1	1
ENSCCAP00000024666	NOGCT	PF08155.11	5.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000042173	-	1608	-	ENSCCAP00000024658	535 (aa)	-	A0A2K5R942
ENSCCAT00000042181	-	1551	-	ENSCCAP00000024666	516 (aa)	-	A0A2K5R954

Gene Model

Click here to download ENSCCAG00000030115's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000030115's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000030115	-	99	73.776	ENSCCAG00000021627	-	92	74.566

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000030115	-	100	74.132	ENSG00000107937	GTPBP4	100	74.132	Homo_sapiens
ENSCCAG00000030115	-	100	59.248	ENSAPOG00000020433	gtpbp4	100	58.110	Acanthochromis_polyacanthus
ENSCCAG00000030115	-	100	70.032	ENSAMEG00000001845	GTPBP4	100	70.032	Ailuropoda_melanoleuca
ENSCCAG00000030115	-	100	58.044	ENSACIG00000018629	gtpbp4	100	58.517	Amphilophus_citrinellus
ENSCCAG00000030115	-	100	61.672	ENSAOCG00000000427	gtpbp4	93	61.830	Amphiprion_ocellaris
ENSCCAG00000030115	-	100	61.830	ENSAPEG00000002544	gtpbp4	100	61.987	Amphiprion_percula
ENSCCAG00000030115	-	100	60.972	ENSATEG00000012635	gtpbp4	95	62.303	Anabas_testudineus
ENSCCAG00000030115	-	55	64.329	ENSAPLG00000013790	-	100	64.634	Anas_platyrhynchos
ENSCCAG00000030115	-	100	64.196	ENSACAG00000002943	GTPBP4	100	64.196	Anolis_carolinensis
ENSCCAG00000030115	-	86	76.301	ENSANAG00000029209	-	100	76.590	Aotus_nancymaae
ENSCCAG00000030115	-	99	63.593	ENSANAG00000022188	-	99	63.911	Aotus_nancymaae
ENSCCAG00000030115	-	75	66.741	ENSACLG00000026330	gtpbp4	92	66.667	Astatotilapia_calliptera
ENSCCAG00000030115	-	100	61.453	ENSAMXG00000019771	gtpbp4	100	62.085	Astyanax_mexicanus
ENSCCAG00000030115	-	100	69.874	ENSBTAG00000014917	GTPBP4	100	70.662	Bos_taurus
ENSCCAG00000030115	-	99	41.798	WBGene00020297	nog-1	99	41.798	Caenorhabditis_elegans
ENSCCAG00000030115	-	100	73.742	ENSCJAG00000022962	-	100	74.528	Callithrix_jacchus
ENSCCAG00000030115	-	100	74.057	ENSCJAG00000008494	-	100	74.843	Callithrix_jacchus
ENSCCAG00000030115	-	91	69.165	ENSCAFG00000005536	GTPBP4	100	70.017	Canis_familiaris
ENSCCAG00000030115	-	100	70.505	ENSCAFG00020004307	GTPBP4	100	71.293	Canis_lupus_dingo
ENSCCAG00000030115	-	100	69.854	ENSCHIG00000018346	GTPBP4	100	70.505	Capra_hircus
ENSCCAG00000030115	-	100	71.451	ENSTSYG00000004977	GTPBP4	100	72.240	Carlito_syrichta
ENSCCAG00000030115	-	99	61.650	ENSCAPG00000002134	GTPBP4	99	62.298	Cavia_aperea
ENSCCAG00000030115	-	100	71.136	ENSCPOG00000013736	GTPBP4	100	71.767	Cavia_porcellus
ENSCCAG00000030115	-	100	73.817	ENSCATG00000004303	GTPBP4	100	74.606	Cercocebus_atys
ENSCCAG00000030115	-	100	71.767	ENSCLAG00000011323	GTPBP4	100	71.924	Chinchilla_lanigera
ENSCCAG00000030115	-	100	73.975	ENSCSAG00000014097	GTPBP4	100	74.763	Chlorocebus_sabaeus
ENSCCAG00000030115	-	95	71.429	ENSCHOG00000012602	GTPBP4	78	84.211	Choloepus_hoffmanni
ENSCCAG00000030115	-	100	65.142	ENSCPBG00000008398	GTPBP4	100	65.300	Chrysemys_picta_bellii
ENSCCAG00000030115	-	100	47.418	ENSCING00000001957	-	100	47.887	Ciona_intestinalis
ENSCCAG00000030115	-	100	47.077	ENSCSAVG00000009793	-	99	53.074	Ciona_savignyi
ENSCCAG00000030115	-	100	69.388	ENSCANG00000014168	GTPBP4	100	70.173	Colobus_angolensis_palliatus
ENSCCAG00000030115	-	100	72.713	ENSCGRG00001013765	Gtpbp4	100	72.871	Cricetulus_griseus_chok1gshd
ENSCCAG00000030115	-	100	72.713	ENSCGRG00000012171	Gtpbp4	100	72.871	Cricetulus_griseus_crigri
ENSCCAG00000030115	-	100	56.426	ENSCSEG00000007352	gtpbp4	100	57.729	Cynoglossus_semilaevis
ENSCCAG00000030115	-	100	59.091	ENSCVAG00000008993	gtpbp4	100	60.883	Cyprinodon_variegatus
ENSCCAG00000030115	-	100	61.173	ENSDARG00000018961	gtpbp4	100	61.648	Danio_rerio
ENSCCAG00000030115	-	72	79.335	ENSDNOG00000006746	GTPBP4	99	79.572	Dasypus_novemcinctus
ENSCCAG00000030115	-	100	70.690	ENSDORG00000010884	Gtpbp4	100	70.862	Dipodomys_ordii
ENSCCAG00000030115	-	100	44.325	FBgn0028473	Non1	100	44.479	Drosophila_melanogaster
ENSCCAG00000030115	-	77	75.510	ENSETEG00000016840	-	71	75.510	Echinops_telfairi
ENSCCAG00000030115	-	98	45.177	ENSEBUG00000010311	gtpbp4	99	44.845	Eptatretus_burgeri
ENSCCAG00000030115	-	100	71.136	ENSEASG00005019082	GTPBP4	100	71.924	Equus_asinus_asinus
ENSCCAG00000030115	-	100	71.136	ENSECAG00000001700	GTPBP4	100	71.924	Equus_caballus
ENSCCAG00000030115	-	100	69.512	ENSEEUG00000009889	GTPBP4	91	69.512	Erinaceus_europaeus
ENSCCAG00000030115	-	100	59.434	ENSELUG00000008578	gtpbp4	100	55.988	Esox_lucius
ENSCCAG00000030115	-	100	71.293	ENSFCAG00000026213	GTPBP4	100	71.293	Felis_catus
ENSCCAG00000030115	-	99	65.287	ENSFALG00000006971	GTPBP4	87	65.452	Ficedula_albicollis
ENSCCAG00000030115	-	100	70.978	ENSFDAG00000000998	GTPBP4	100	71.767	Fukomys_damarensis
ENSCCAG00000030115	-	100	60.658	ENSFHEG00000012922	gtpbp4	100	61.830	Fundulus_heteroclitus
ENSCCAG00000030115	-	100	59.621	ENSGMOG00000016090	gtpbp4	100	59.779	Gadus_morhua
ENSCCAG00000030115	-	100	64.501	ENSGALG00000006703	GTPBP4	100	64.659	Gallus_gallus
ENSCCAG00000030115	-	100	60.815	ENSGAFG00000002075	gtpbp4	100	62.145	Gambusia_affinis
ENSCCAG00000030115	-	100	60.731	ENSGACG00000017481	gtpbp4	100	60.890	Gasterosteus_aculeatus
ENSCCAG00000030115	-	91	64.225	ENSGAGG00000018689	GTPBP4	100	64.736	Gopherus_agassizii
ENSCCAG00000030115	-	100	74.448	ENSGGOG00000013372	GTPBP4	100	74.448	Gorilla_gorilla
ENSCCAG00000030115	-	100	60.815	ENSHBUG00000000192	gtpbp4	100	62.303	Haplochromis_burtoni
ENSCCAG00000030115	-	100	71.293	ENSHGLG00000013071	GTPBP4	100	72.082	Heterocephalus_glaber_female
ENSCCAG00000030115	-	100	71.293	ENSHGLG00100017850	GTPBP4	100	72.082	Heterocephalus_glaber_male
ENSCCAG00000030115	-	100	64.409	ENSHGLG00100002964	-	100	65.197	Heterocephalus_glaber_male
ENSCCAG00000030115	-	100	61.575	ENSHCOG00000011543	gtpbp4	100	62.047	Hippocampus_comes
ENSCCAG00000030115	-	100	61.987	ENSIPUG00000014417	GTPBP4	100	62.145	Ictalurus_punctatus
ENSCCAG00000030115	-	100	68.530	ENSSTOG00000023023	-	100	68.530	Ictidomys_tridecemlineatus
ENSCCAG00000030115	-	100	72.082	ENSSTOG00000010042	-	100	72.240	Ictidomys_tridecemlineatus
ENSCCAG00000030115	-	100	70.505	ENSJJAG00000010021	Gtpbp4	100	70.662	Jaculus_jaculus
ENSCCAG00000030115	-	100	60.568	ENSKMAG00000021705	gtpbp4	100	60.726	Kryptolebias_marmoratus
ENSCCAG00000030115	-	100	56.535	ENSLBEG00000021419	gtpbp4	100	58.844	Labrus_bergylta
ENSCCAG00000030115	-	100	62.618	ENSLACG00000001449	GTPBP4	100	62.776	Latimeria_chalumnae
ENSCCAG00000030115	-	100	59.846	ENSLOCG00000012279	gtpbp4	100	60.615	Lepisosteus_oculatus
ENSCCAG00000030115	-	100	71.451	ENSLAFG00000018578	GTPBP4	100	71.609	Loxodonta_africana
ENSCCAG00000030115	-	100	73.502	ENSMFAG00000046251	GTPBP4	100	74.290	Macaca_fascicularis
ENSCCAG00000030115	-	100	70.978	ENSMMUG00000010813	GTPBP4	100	71.767	Macaca_mulatta
ENSCCAG00000030115	-	100	73.659	ENSMNEG00000044366	GTPBP4	100	74.448	Macaca_nemestrina
ENSCCAG00000030115	-	100	73.817	ENSMLEG00000039605	GTPBP4	100	74.606	Mandrillus_leucophaeus
ENSCCAG00000030115	-	100	62.618	ENSMAMG00000013763	gtpbp4	92	62.776	Mastacembelus_armatus
ENSCCAG00000030115	-	100	60.972	ENSMZEG00005006621	gtpbp4	100	62.461	Maylandia_zebra
ENSCCAG00000030115	-	100	72.240	ENSMAUG00000000571	Gtpbp4	100	72.397	Mesocricetus_auratus
ENSCCAG00000030115	-	100	71.767	ENSMICG00000013332	GTPBP4	100	72.555	Microcebus_murinus
ENSCCAG00000030115	-	100	72.397	ENSMOCG00000002209	Gtpbp4	100	72.555	Microtus_ochrogaster
ENSCCAG00000030115	-	100	58.202	ENSMMOG00000011257	gtpbp4	100	58.360	Mola_mola
ENSCCAG00000030115	-	100	67.981	ENSMODG00000005978	GTPBP4	100	68.139	Monodelphis_domestica
ENSCCAG00000030115	-	100	61.356	ENSMALG00000012488	gtpbp4	100	61.356	Monopterus_albus
ENSCCAG00000030115	-	99	70.886	MGP_CAROLIEiJ_G0018215	Gtpbp4	100	71.044	Mus_caroli
ENSCCAG00000030115	-	100	72.397	ENSMUSG00000021149	Gtpbp4	100	72.555	Mus_musculus
ENSCCAG00000030115	-	100	72.397	MGP_PahariEiJ_G0019265	Gtpbp4	100	72.555	Mus_pahari
ENSCCAG00000030115	-	99	72.310	MGP_SPRETEiJ_G0019073	Gtpbp4	100	72.468	Mus_spretus
ENSCCAG00000030115	-	91	68.825	ENSMPUG00000016221	GTPBP4	100	68.825	Mustela_putorius_furo
ENSCCAG00000030115	-	100	70.032	ENSMLUG00000028192	GTPBP4	100	70.820	Myotis_lucifugus
ENSCCAG00000030115	-	100	71.609	ENSNGAG00000015364	Gtpbp4	100	71.767	Nannospalax_galili
ENSCCAG00000030115	-	100	53.729	ENSNBRG00000019965	gtpbp4	100	55.290	Neolamprologus_brichardi
ENSCCAG00000030115	-	100	74.763	ENSNLEG00000013495	GTPBP4	100	74.763	Nomascus_leucogenys
ENSCCAG00000030115	-	100	71.968	ENSOPRG00000008671	GTPBP4	91	71.968	Ochotona_princeps
ENSCCAG00000030115	-	100	71.767	ENSODEG00000000962	-	100	72.555	Octodon_degus
ENSCCAG00000030115	-	100	71.136	ENSODEG00000019152	-	100	71.136	Octodon_degus
ENSCCAG00000030115	-	100	61.129	ENSONIG00000017707	gtpbp4	100	62.618	Oreochromis_niloticus
ENSCCAG00000030115	-	99	65.452	ENSOANG00000006095	-	99	65.610	Ornithorhynchus_anatinus
ENSCCAG00000030115	-	61	68.097	ENSOCUG00000014716	-	100	68.097	Oryctolagus_cuniculus
ENSCCAG00000030115	-	100	71.136	ENSOCUG00000016120	-	100	71.293	Oryctolagus_cuniculus
ENSCCAG00000030115	-	100	60.726	ENSORLG00000006151	gtpbp4	100	60.883	Oryzias_latipes
ENSCCAG00000030115	-	100	60.726	ENSORLG00020020899	gtpbp4	100	60.883	Oryzias_latipes_hni
ENSCCAG00000030115	-	100	60.095	ENSORLG00015020562	gtpbp4	100	60.726	Oryzias_latipes_hsok
ENSCCAG00000030115	-	100	61.041	ENSOMEG00000019684	gtpbp4	100	61.199	Oryzias_melastigma
ENSCCAG00000030115	-	100	72.555	ENSOGAG00000011941	GTPBP4	100	73.344	Otolemur_garnettii
ENSCCAG00000030115	-	100	69.702	ENSOARG00000015047	GTPBP4	100	70.016	Ovis_aries
ENSCCAG00000030115	-	100	74.290	ENSPPAG00000042066	GTPBP4	100	74.290	Pan_paniscus
ENSCCAG00000030115	-	100	71.451	ENSPPRG00000009895	GTPBP4	100	71.451	Panthera_pardus
ENSCCAG00000030115	-	100	71.451	ENSPTIG00000008569	GTPBP4	100	71.451	Panthera_tigris_altaica
ENSCCAG00000030115	-	76	76.159	ENSPTRG00000002236	GTPBP4	86	76.510	Pan_troglodytes
ENSCCAG00000030115	-	100	73.659	ENSPANG00000023543	GTPBP4	100	74.448	Papio_anubis
ENSCCAG00000030115	-	100	60.726	ENSPKIG00000012301	gtpbp4	100	61.789	Paramormyrops_kingsleyae
ENSCCAG00000030115	-	57	65.826	ENSPSIG00000005442	GTPBP4	93	65.826	Pelodiscus_sinensis
ENSCCAG00000030115	-	100	59.148	ENSPMGG00000001462	gtpbp4	100	59.148	Periophthalmus_magnuspinnatus
ENSCCAG00000030115	-	100	71.924	ENSPEMG00000015091	-	100	72.082	Peromyscus_maniculatus_bairdii
ENSCCAG00000030115	-	100	59.797	ENSPEMG00000012279	-	100	59.797	Peromyscus_maniculatus_bairdii
ENSCCAG00000030115	-	100	55.222	ENSPMAG00000000905	gtpbp4	100	55.696	Petromyzon_marinus
ENSCCAG00000030115	-	100	67.666	ENSPCIG00000026082	GTPBP4	100	67.823	Phascolarctos_cinereus
ENSCCAG00000030115	-	100	60.972	ENSPFOG00000000026	gtpbp4	100	62.303	Poecilia_formosa
ENSCCAG00000030115	-	91	59.423	ENSPLAG00000002898	gtpbp4	97	60.855	Poecilia_latipinna
ENSCCAG00000030115	-	100	61.129	ENSPMEG00000016422	gtpbp4	100	62.461	Poecilia_mexicana
ENSCCAG00000030115	-	100	57.210	ENSPREG00000019870	gtpbp4	100	58.517	Poecilia_reticulata
ENSCCAG00000030115	-	100	74.921	ENSPPYG00000002037	GTPBP4	100	74.921	Pongo_abelii
ENSCCAG00000030115	-	100	68.139	ENSPCOG00000014382	-	100	68.927	Propithecus_coquereli
ENSCCAG00000030115	-	96	70.234	ENSPCOG00000014602	-	100	70.067	Propithecus_coquereli
ENSCCAG00000030115	-	90	66.562	ENSPVAG00000005882	GTPBP4	86	66.352	Pteropus_vampyrus
ENSCCAG00000030115	-	100	60.267	ENSPNYG00000024251	gtpbp4	100	61.849	Pundamilia_nyererei
ENSCCAG00000030115	-	100	61.672	ENSPNAG00000019977	gtpbp4	100	62.303	Pygocentrus_nattereri
ENSCCAG00000030115	-	100	70.597	ENSRNOG00000016217	Gtpbp4	100	71.855	Rattus_norvegicus
ENSCCAG00000030115	-	100	73.502	ENSRBIG00000028875	GTPBP4	100	74.290	Rhinopithecus_bieti
ENSCCAG00000030115	-	100	73.502	ENSRROG00000030798	GTPBP4	100	74.290	Rhinopithecus_roxellana
ENSCCAG00000030115	-	99	35.039	YPL093W	-	99	35.039	Saccharomyces_cerevisiae
ENSCCAG00000030115	-	100	74.528	ENSSBOG00000028421	GTPBP4	100	74.686	Saimiri_boliviensis_boliviensis
ENSCCAG00000030115	-	99	67.197	ENSSHAG00000014713	GTPBP4	94	67.357	Sarcophilus_harrisii
ENSCCAG00000030115	-	100	62.866	ENSSFOG00015003167	gtpbp4	100	63.355	Scleropages_formosus
ENSCCAG00000030115	-	100	59.561	ENSSMAG00000005863	gtpbp4	100	61.041	Scophthalmus_maximus
ENSCCAG00000030115	-	100	61.199	ENSSDUG00000006534	gtpbp4	100	61.356	Seriola_dumerili
ENSCCAG00000030115	-	100	61.199	ENSSLDG00000020688	gtpbp4	100	61.356	Seriola_lalandi_dorsalis
ENSCCAG00000030115	-	62	74.000	ENSSARG00000003409	-	79	74.000	Sorex_araneus
ENSCCAG00000030115	-	100	65.142	ENSSPUG00000002153	GTPBP4	100	65.300	Sphenodon_punctatus
ENSCCAG00000030115	-	67	63.185	ENSSPAG00000014583	gtpbp4	100	63.185	Stegastes_partitus
ENSCCAG00000030115	-	100	68.770	ENSSSCG00000028602	GTPBP4	100	68.770	Sus_scrofa
ENSCCAG00000030115	-	99	64.320	ENSTGUG00000000820	GTPBP4	100	64.480	Taeniopygia_guttata
ENSCCAG00000030115	-	100	60.726	ENSTRUG00000003900	gtpbp4	100	60.726	Takifugu_rubripes
ENSCCAG00000030115	-	100	61.830	ENSTNIG00000007992	gtpbp4	100	61.830	Tetraodon_nigroviridis
ENSCCAG00000030115	-	84	74.522	ENSTBEG00000003613	GTPBP4	78	74.522	Tupaia_belangeri
ENSCCAG00000030115	-	100	69.967	ENSTTRG00000011163	GTPBP4	100	69.967	Tursiops_truncatus
ENSCCAG00000030115	-	100	70.347	ENSUAMG00000013191	GTPBP4	100	70.347	Ursus_americanus
ENSCCAG00000030115	-	91	68.825	ENSUMAG00000016138	GTPBP4	100	68.825	Ursus_maritimus
ENSCCAG00000030115	-	100	70.347	ENSVVUG00000008608	GTPBP4	98	71.136	Vulpes_vulpes
ENSCCAG00000030115	-	100	54.186	ENSXETG00000018097	gtpbp4	100	62.048	Xenopus_tropicalis
ENSCCAG00000030115	-	100	58.466	ENSXCOG00000019953	gtpbp4	98	59.646	Xiphophorus_couchianus
ENSCCAG00000030115	-	100	60.374	ENSXMAG00000006719	gtpbp4	100	61.538	Xiphophorus_maculatus