EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000030129 (Gene tree)
Gene ID: 108290153
Gene Symbol: -
Alias: -
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 16027 bases
Position: chrKV389851.1:1389848-1405874
Accession: 108290153
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000024731	RRM_1	PF00076.22	1.1e-38	1	3
ENSCCAP00000024731	RRM_1	PF00076.22	1.1e-38	2	3
ENSCCAP00000024731	RRM_1	PF00076.22	1.1e-38	3	3
ENSCCAP00000024726	RRM_1	PF00076.22	3.3e-38	1	3
ENSCCAP00000024726	RRM_1	PF00076.22	3.3e-38	2	3
ENSCCAP00000024726	RRM_1	PF00076.22	3.3e-38	3	3
ENSCCAP00000024722	RRM_1	PF00076.22	5.1e-38	1	3
ENSCCAP00000024722	RRM_1	PF00076.22	5.1e-38	2	3
ENSCCAP00000024722	RRM_1	PF00076.22	5.1e-38	3	3
ENSCCAP00000024693	RRM_1	PF00076.22	5.2e-38	1	3
ENSCCAP00000024693	RRM_1	PF00076.22	5.2e-38	2	3
ENSCCAP00000024693	RRM_1	PF00076.22	5.2e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000042238	-	1770	-	ENSCCAP00000024722	589 (aa)	-	A0A2K5R992
ENSCCAT00000042242	-	1578	-	ENSCCAP00000024726	525 (aa)	-	A0A2K5R9C0
ENSCCAT00000042209	-	4372	XM_017509876	ENSCCAP00000024693	594 (aa)	XP_017365365	A0A2K5R975
ENSCCAT00000042247	-	1182	-	ENSCCAP00000024731	393 (aa)	-	A0A2K5R9C5

Gene Model

Click here to download ENSCCAG00000030129's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000030129's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000030129	-	81	55.418	ENSCCAG00000023435	-	76	47.198
ENSCCAG00000030129	-	77	55.375	ENSCCAG00000022117	SYNCRIP	79	46.444
ENSCCAG00000030129	-	87	68.300	ENSCCAG00000018168	A1CF	75	58.681
ENSCCAG00000030129	-	52	42.927	ENSCCAG00000020065	DND1	58	42.927
ENSCCAG00000030129	-	76	58.667	ENSCCAG00000001323	-	58	58.667
ENSCCAG00000030129	-	99	68.750	ENSCCAG00000024397	-	99	68.412
ENSCCAG00000030129	-	77	42.997	ENSCCAG00000017947	-	82	38.741
ENSCCAG00000030129	-	76	74.000	ENSCCAG00000027619	-	64	74.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000030129	-	100	98.476	ENSG00000163694	RBM47	100	98.618	Homo_sapiens
ENSCCAG00000030129	-	100	83.733	ENSAPOG00000011062	rbm47	100	83.733	Acanthochromis_polyacanthus
ENSCCAG00000030129	-	100	95.973	ENSAMEG00000009672	RBM47	100	95.973	Ailuropoda_melanoleuca
ENSCCAG00000030129	-	100	84.267	ENSACIG00000011531	rbm47	100	84.267	Amphilophus_citrinellus
ENSCCAG00000030129	-	100	81.378	ENSAOCG00000022245	rbm47	100	83.733	Amphiprion_ocellaris
ENSCCAG00000030129	-	100	81.378	ENSAPEG00000018304	rbm47	100	83.733	Amphiprion_percula
ENSCCAG00000030129	-	100	82.262	ENSATEG00000018400	rbm47	100	82.262	Anabas_testudineus
ENSCCAG00000030129	-	100	87.270	ENSAPLG00000013974	RBM47	100	88.027	Anas_platyrhynchos
ENSCCAG00000030129	-	100	86.689	ENSACAG00000011833	RBM47	100	86.023	Anolis_carolinensis
ENSCCAG00000030129	-	100	99.327	ENSANAG00000029440	RBM47	100	99.327	Aotus_nancymaae
ENSCCAG00000030129	-	100	82.732	ENSACLG00000016902	rbm47	100	82.732	Astatotilapia_calliptera
ENSCCAG00000030129	-	98	79.198	ENSAMXG00000021794	rbm47	100	81.443	Astyanax_mexicanus
ENSCCAG00000030129	-	100	96.812	ENSBTAG00000002356	RBM47	100	96.812	Bos_taurus
ENSCCAG00000030129	-	100	99.327	ENSCJAG00000019385	RBM47	100	99.327	Callithrix_jacchus
ENSCCAG00000030129	-	96	92.496	ENSCAFG00000015898	RBM47	100	92.630	Canis_familiaris
ENSCCAG00000030129	-	90	93.768	ENSCAFG00020010558	RBM47	94	93.634	Canis_lupus_dingo
ENSCCAG00000030129	-	100	96.812	ENSCHIG00000026214	RBM47	100	96.812	Capra_hircus
ENSCCAG00000030129	-	90	84.146	ENSTSYG00000033612	RBM47	96	84.146	Carlito_syrichta
ENSCCAG00000030129	-	100	87.331	ENSCAPG00000008426	RBM47	100	87.752	Cavia_aperea
ENSCCAG00000030129	-	100	96.533	ENSCPOG00000014100	RBM47	100	96.533	Cavia_porcellus
ENSCCAG00000030129	-	100	98.667	ENSCATG00000042064	RBM47	100	98.667	Cercocebus_atys
ENSCCAG00000030129	-	100	96.000	ENSCLAG00000001684	RBM47	100	94.304	Chinchilla_lanigera
ENSCCAG00000030129	-	100	98.485	ENSCSAG00000017060	RBM47	100	98.485	Chlorocebus_sabaeus
ENSCCAG00000030129	-	87	97.093	ENSCHOG00000011731	RBM47	88	93.671	Choloepus_hoffmanni
ENSCCAG00000030129	-	100	93.085	ENSCPBG00000013831	RBM47	100	90.268	Chrysemys_picta_bellii
ENSCCAG00000030129	-	100	98.667	ENSCANG00000019997	RBM47	100	98.667	Colobus_angolensis_palliatus
ENSCCAG00000030129	-	100	87.713	ENSCGRG00001020102	-	100	87.524	Cricetulus_griseus_chok1gshd
ENSCCAG00000030129	-	100	94.180	ENSCGRG00001000623	-	100	93.456	Cricetulus_griseus_chok1gshd
ENSCCAG00000030129	-	100	87.335	ENSCGRG00000014760	-	100	87.146	Cricetulus_griseus_crigri
ENSCCAG00000030129	-	100	93.651	ENSCGRG00000007762	-	100	94.937	Cricetulus_griseus_crigri
ENSCCAG00000030129	-	95	82.540	ENSCSEG00000004545	rbm47	100	75.585	Cynoglossus_semilaevis
ENSCCAG00000030129	-	98	83.880	ENSCVAG00000020144	rbm47	100	81.888	Cyprinodon_variegatus
ENSCCAG00000030129	-	98	80.451	ENSDARG00000061985	rbm47	100	76.277	Danio_rerio
ENSCCAG00000030129	-	100	92.217	ENSDNOG00000046854	RBM47	100	93.909	Dasypus_novemcinctus
ENSCCAG00000030129	-	100	94.491	ENSDORG00000010144	Rbm47	100	94.324	Dipodomys_ordii
ENSCCAG00000030129	-	100	93.155	ENSETEG00000009194	RBM47	100	94.658	Echinops_telfairi
ENSCCAG00000030129	-	95	71.429	ENSEBUG00000011912	rbm47	99	71.429	Eptatretus_burgeri
ENSCCAG00000030129	-	100	96.309	ENSEASG00005008443	RBM47	100	96.309	Equus_asinus_asinus
ENSCCAG00000030129	-	100	96.309	ENSECAG00000004400	RBM47	100	96.309	Equus_caballus
ENSCCAG00000030129	-	76	94.372	ENSEEUG00000001194	RBM47	75	95.238	Erinaceus_europaeus
ENSCCAG00000030129	-	99	82.759	ENSELUG00000006148	rbm47	97	82.586	Esox_lucius
ENSCCAG00000030129	-	100	95.966	ENSFCAG00000012399	RBM47	100	95.966	Felis_catus
ENSCCAG00000030129	-	100	90.134	ENSFALG00000002861	RBM47	100	90.970	Ficedula_albicollis
ENSCCAG00000030129	-	100	94.667	ENSFDAG00000016326	RBM47	100	93.063	Fukomys_damarensis
ENSCCAG00000030129	-	100	80.977	ENSFHEG00000007938	rbm47	100	76.007	Fundulus_heteroclitus
ENSCCAG00000030129	-	100	81.519	ENSGMOG00000014802	rbm47	100	81.108	Gadus_morhua
ENSCCAG00000030129	-	95	90.691	ENSGALG00000014267	RBM47	99	92.287	Gallus_gallus
ENSCCAG00000030129	-	96	82.632	ENSGAFG00000020571	rbm47	99	82.632	Gambusia_affinis
ENSCCAG00000030129	-	100	79.487	ENSGACG00000016223	rbm47	100	79.487	Gasterosteus_aculeatus
ENSCCAG00000030129	-	100	90.772	ENSGAGG00000020051	RBM47	100	90.436	Gopherus_agassizii
ENSCCAG00000030129	-	100	98.667	ENSGGOG00000001367	RBM47	100	98.667	Gorilla_gorilla
ENSCCAG00000030129	-	100	82.732	ENSHBUG00000003520	rbm47	100	82.732	Haplochromis_burtoni
ENSCCAG00000030129	-	100	74.905	ENSHGLG00000016914	RBM47	100	96.203	Heterocephalus_glaber_female
ENSCCAG00000030129	-	100	90.133	ENSHGLG00100003071	-	100	83.729	Heterocephalus_glaber_male
ENSCCAG00000030129	-	100	94.241	ENSHGLG00100014028	-	100	96.203	Heterocephalus_glaber_male
ENSCCAG00000030129	-	95	84.043	ENSHCOG00000002074	rbm47	99	84.043	Hippocampus_comes
ENSCCAG00000030129	-	100	80.829	ENSIPUG00000004743	rbm47	100	82.620	Ictalurus_punctatus
ENSCCAG00000030129	-	100	96.395	ENSSTOG00000004727	RBM47	100	96.395	Ictidomys_tridecemlineatus
ENSCCAG00000030129	-	100	93.634	ENSJJAG00000013823	Rbm47	100	93.970	Jaculus_jaculus
ENSCCAG00000030129	-	100	80.916	ENSKMAG00000000084	rbm47	100	84.169	Kryptolebias_marmoratus
ENSCCAG00000030129	-	100	80.000	ENSLBEG00000008436	rbm47	100	82.979	Labrus_bergylta
ENSCCAG00000030129	-	100	88.564	ENSLACG00000007196	RBM47	100	84.486	Latimeria_chalumnae
ENSCCAG00000030129	-	95	87.166	ENSLOCG00000012966	rbm47	95	87.166	Lepisosteus_oculatus
ENSCCAG00000030129	-	100	94.463	ENSLAFG00000011998	RBM47	100	94.799	Loxodonta_africana
ENSCCAG00000030129	-	100	98.667	ENSMFAG00000037967	RBM47	100	98.667	Macaca_fascicularis
ENSCCAG00000030129	-	100	98.485	ENSMMUG00000012036	RBM47	100	98.485	Macaca_mulatta
ENSCCAG00000030129	-	100	98.476	ENSMNEG00000040774	RBM47	100	98.476	Macaca_nemestrina
ENSCCAG00000030129	-	100	99.048	ENSMLEG00000041432	RBM47	100	99.048	Mandrillus_leucophaeus
ENSCCAG00000030129	-	100	82.474	ENSMAMG00000019143	rbm47	100	82.474	Mastacembelus_armatus
ENSCCAG00000030129	-	100	82.732	ENSMZEG00005023659	rbm47	100	82.732	Maylandia_zebra
ENSCCAG00000030129	-	100	89.850	ENSMGAG00000012226	RBM47	100	90.183	Meleagris_gallopavo
ENSCCAG00000030129	-	100	93.635	ENSMAUG00000006493	Rbm47	100	94.937	Mesocricetus_auratus
ENSCCAG00000030129	-	100	89.057	ENSMICG00000026417	RBM47	100	90.323	Microcebus_murinus
ENSCCAG00000030129	-	100	93.792	ENSMOCG00000021170	Rbm47	100	95.570	Microtus_ochrogaster
ENSCCAG00000030129	-	100	76.606	ENSMMOG00000007260	rbm47	100	81.137	Mola_mola
ENSCCAG00000030129	-	100	92.800	ENSMODG00000007003	RBM47	100	91.092	Monodelphis_domestica
ENSCCAG00000030129	-	79	81.073	ENSMODG00000015426	-	99	81.073	Monodelphis_domestica
ENSCCAG00000030129	-	100	81.980	ENSMODG00000020561	-	100	81.154	Monodelphis_domestica
ENSCCAG00000030129	-	100	80.256	ENSMALG00000005167	rbm47	100	84.574	Monopterus_albus
ENSCCAG00000030129	-	100	93.651	MGP_CAROLIEiJ_G0027258	Rbm47	100	93.671	Mus_caroli
ENSCCAG00000030129	-	100	93.915	ENSMUSG00000070780	Rbm47	100	93.671	Mus_musculus
ENSCCAG00000030129	-	100	93.915	MGP_PahariEiJ_G0017040	Rbm47	100	94.304	Mus_pahari
ENSCCAG00000030129	-	100	92.893	MGP_SPRETEiJ_G0028253	Rbm47	100	93.671	Mus_spretus
ENSCCAG00000030129	-	100	96.639	ENSMPUG00000006177	RBM47	94	96.639	Mustela_putorius_furo
ENSCCAG00000030129	-	100	93.132	ENSMLUG00000000889	RBM47	100	93.412	Myotis_lucifugus
ENSCCAG00000030129	-	100	95.213	ENSNGAG00000003325	Rbm47	100	94.295	Nannospalax_galili
ENSCCAG00000030129	-	100	82.946	ENSNBRG00000015092	rbm47	100	82.946	Neolamprologus_brichardi
ENSCCAG00000030129	-	100	98.663	ENSNLEG00000017151	RBM47	100	98.286	Nomascus_leucogenys
ENSCCAG00000030129	-	91	93.855	ENSMEUG00000009516	-	99	87.119	Notamacropus_eugenii
ENSCCAG00000030129	-	85	97.083	ENSOPRG00000016507	-	75	97.083	Ochotona_princeps
ENSCCAG00000030129	-	100	95.733	ENSODEG00000004873	RBM47	100	94.078	Octodon_degus
ENSCCAG00000030129	-	100	81.538	ENSONIG00000009061	rbm47	100	81.795	Oreochromis_niloticus
ENSCCAG00000030129	-	100	86.265	ENSOANG00000008978	RBM47	100	87.102	Ornithorhynchus_anatinus
ENSCCAG00000030129	-	100	94.799	ENSOCUG00000012034	RBM47	100	94.755	Oryctolagus_cuniculus
ENSCCAG00000030129	-	100	84.309	ENSORLG00000005847	rbm47	100	84.309	Oryzias_latipes
ENSCCAG00000030129	-	100	84.309	ENSORLG00020005154	rbm47	100	84.309	Oryzias_latipes_hni
ENSCCAG00000030129	-	100	84.574	ENSORLG00015000066	rbm47	100	84.574	Oryzias_latipes_hsok
ENSCCAG00000030129	-	100	84.309	ENSOMEG00000010730	rbm47	100	84.309	Oryzias_melastigma
ENSCCAG00000030129	-	100	86.949	ENSOGAG00000025193	-	100	87.119	Otolemur_garnettii
ENSCCAG00000030129	-	100	97.143	ENSOGAG00000029367	-	100	97.143	Otolemur_garnettii
ENSCCAG00000030129	-	100	93.421	ENSOARG00000012711	RBM47	100	88.275	Ovis_aries
ENSCCAG00000030129	-	100	98.316	ENSPPAG00000029763	RBM47	100	98.316	Pan_paniscus
ENSCCAG00000030129	-	100	92.941	ENSPPRG00000012873	RBM47	100	92.941	Panthera_pardus
ENSCCAG00000030129	-	85	90.711	ENSPTIG00000017046	RBM47	100	91.502	Panthera_tigris_altaica
ENSCCAG00000030129	-	100	98.667	ENSPTRG00000016006	RBM47	100	98.667	Pan_troglodytes
ENSCCAG00000030129	-	100	98.667	ENSPANG00000005980	RBM47	100	98.667	Papio_anubis
ENSCCAG00000030129	-	97	81.061	ENSPKIG00000013431	RBM47	98	82.597	Paramormyrops_kingsleyae
ENSCCAG00000030129	-	90	85.552	ENSPKIG00000005037	rbm47	100	81.984	Paramormyrops_kingsleyae
ENSCCAG00000030129	-	95	92.819	ENSPSIG00000017516	RBM47	97	91.098	Pelodiscus_sinensis
ENSCCAG00000030129	-	95	83.422	ENSPMGG00000018540	rbm47	100	83.957	Periophthalmus_magnuspinnatus
ENSCCAG00000030129	-	100	93.960	ENSPEMG00000011088	Rbm47	100	94.463	Peromyscus_maniculatus_bairdii
ENSCCAG00000030129	-	91	85.833	ENSPFOG00000007997	rbm47	100	80.506	Poecilia_formosa
ENSCCAG00000030129	-	95	83.245	ENSPLAG00000002072	rbm47	100	83.245	Poecilia_latipinna
ENSCCAG00000030129	-	96	86.761	ENSPMEG00000017492	rbm47	100	83.511	Poecilia_mexicana
ENSCCAG00000030129	-	96	86.761	ENSPREG00000008456	rbm47	100	83.511	Poecilia_reticulata
ENSCCAG00000030129	-	98	85.559	ENSPPYG00000014688	RBM47	100	83.080	Pongo_abelii
ENSCCAG00000030129	-	96	96.579	ENSPCAG00000011879	RBM47	81	97.000	Procavia_capensis
ENSCCAG00000030129	-	100	91.765	ENSPCOG00000023451	RBM47	100	92.373	Propithecus_coquereli
ENSCCAG00000030129	-	100	93.970	ENSPVAG00000003812	RBM47	100	94.807	Pteropus_vampyrus
ENSCCAG00000030129	-	100	82.732	ENSPNYG00000022868	rbm47	100	82.732	Pundamilia_nyererei
ENSCCAG00000030129	-	98	80.250	ENSPNAG00000007940	rbm47	100	81.748	Pygocentrus_nattereri
ENSCCAG00000030129	-	100	93.289	ENSRNOG00000002408	Rbm47	100	93.624	Rattus_norvegicus
ENSCCAG00000030129	-	100	98.857	ENSRBIG00000039601	RBM47	100	98.857	Rhinopithecus_bieti
ENSCCAG00000030129	-	100	98.857	ENSRROG00000044696	RBM47	100	98.857	Rhinopithecus_roxellana
ENSCCAG00000030129	-	100	97.964	ENSSBOG00000028475	RBM47	100	99.172	Saimiri_boliviensis_boliviensis
ENSCCAG00000030129	-	100	93.067	ENSSHAG00000017576	RBM47	100	91.864	Sarcophilus_harrisii
ENSCCAG00000030129	-	96	79.737	ENSSFOG00015024101	RBM47	100	74.790	Scleropages_formosus
ENSCCAG00000030129	-	96	80.867	ENSSFOG00015012445	rbm47	100	81.654	Scleropages_formosus
ENSCCAG00000030129	-	98	78.750	ENSSMAG00000009744	rbm47	100	80.256	Scophthalmus_maximus
ENSCCAG00000030129	-	100	81.313	ENSSDUG00000022684	rbm47	100	84.043	Seriola_dumerili
ENSCCAG00000030129	-	100	80.303	ENSSLDG00000003109	rbm47	100	84.309	Seriola_lalandi_dorsalis
ENSCCAG00000030129	-	95	93.931	ENSSARG00000001735	RBM47	75	95.302	Sorex_araneus
ENSCCAG00000030129	-	100	88.027	ENSSPUG00000007515	RBM47	100	91.444	Sphenodon_punctatus
ENSCCAG00000030129	-	100	82.097	ENSSPAG00000001257	rbm47	100	84.800	Stegastes_partitus
ENSCCAG00000030129	-	100	96.309	ENSSSCG00000008796	RBM47	100	96.309	Sus_scrofa
ENSCCAG00000030129	-	100	89.465	ENSTGUG00000008705	RBM47	100	90.404	Taeniopygia_guttata
ENSCCAG00000030129	-	93	84.110	ENSTRUG00000014050	rbm47	100	84.110	Takifugu_rubripes
ENSCCAG00000030129	-	100	81.654	ENSTNIG00000006127	rbm47	100	76.112	Tetraodon_nigroviridis
ENSCCAG00000030129	-	95	90.374	ENSTBEG00000001607	RBM47	76	91.139	Tupaia_belangeri
ENSCCAG00000030129	-	100	95.470	ENSTTRG00000002839	RBM47	100	95.470	Tursiops_truncatus
ENSCCAG00000030129	-	100	96.134	ENSUAMG00000021346	RBM47	100	96.134	Ursus_americanus
ENSCCAG00000030129	-	57	96.575	ENSVPAG00000000641	-	57	96.575	Vicugna_pacos
ENSCCAG00000030129	-	96	93.717	ENSVVUG00000014774	RBM47	100	92.905	Vulpes_vulpes
ENSCCAG00000030129	-	100	84.992	ENSXETG00000012802	rbm47	100	84.992	Xenopus_tropicalis
ENSCCAG00000030129	-	95	83.245	ENSXCOG00000000780	rbm47	100	83.245	Xiphophorus_couchianus
ENSCCAG00000030129	-	100	83.245	ENSXMAG00000009874	rbm47	100	83.245	Xiphophorus_maculatus