EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000030130 (Gene tree)
Gene ID: 108304397
Gene Symbol: SLIRP
Alias: C14orf156|DC50
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 51120 bases
Position: chrKV389480.1:1368676-1419795
Accession: 108304397
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000024654	RRM_1	PF00076.22	3.7e-14	1	1
ENSCCAP00000024660	RRM_1	PF00076.22	3.9e-14	1	1
ENSCCAP00000024652	RRM_1	PF00076.22	4.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000042167	SLIRP-201	375	-	ENSCCAP00000024652	124 (aa)	-	A0A2K5R920
ENSCCAT00000042169	SLIRP-202	2298	XM_017528536	ENSCCAP00000024654	108 (aa)	XP_017384025	A0A2K5R959
ENSCCAT00000042175	SLIRP-203	2703	-	ENSCCAP00000024660	109 (aa)	-	A0A2K5R969

Gene Model

Click here to download ENSCCAG00000030130's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000030130's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000030130	SLIRP	89	30.769	ENSCCAG00000036244	HNRNPAB	57	30.769
ENSCCAG00000030130	SLIRP	74	35.714	ENSCCAG00000036872	RBM38	69	35.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000030130	SLIRP	89	82.727	ENSG00000119705	SLIRP	100	81.452	Homo_sapiens
ENSCCAG00000030130	SLIRP	69	58.108	ENSAPOG00000001298	slirp	74	58.108	Acanthochromis_polyacanthus
ENSCCAG00000030130	SLIRP	83	80.220	ENSAMEG00000003975	SLIRP	100	80.220	Ailuropoda_melanoleuca
ENSCCAG00000030130	SLIRP	69	56.000	ENSACIG00000023083	slirp	74	56.000	Amphilophus_citrinellus
ENSCCAG00000030130	SLIRP	69	57.333	ENSAOCG00000006342	slirp	76	57.333	Amphiprion_ocellaris
ENSCCAG00000030130	SLIRP	69	57.333	ENSAPEG00000015917	slirp	76	57.333	Amphiprion_percula
ENSCCAG00000030130	SLIRP	69	57.333	ENSAPEG00000015719	-	77	57.333	Amphiprion_percula
ENSCCAG00000030130	SLIRP	71	51.948	ENSATEG00000013525	slirp	77	51.948	Anabas_testudineus
ENSCCAG00000030130	SLIRP	74	55.000	ENSAMXG00000018693	slirp	80	55.000	Astyanax_mexicanus
ENSCCAG00000030130	SLIRP	100	94.444	ENSCJAG00000016946	SLIRP	100	94.444	Callithrix_jacchus
ENSCCAG00000030130	SLIRP	100	74.775	ENSCAFG00020015876	-	100	74.775	Canis_lupus_dingo
ENSCCAG00000030130	SLIRP	100	79.817	ENSCATG00000036327	SLIRP	99	81.522	Cercocebus_atys
ENSCCAG00000030130	SLIRP	90	82.653	ENSCSAG00000011736	SLIRP	100	81.651	Chlorocebus_sabaeus
ENSCCAG00000030130	SLIRP	75	52.381	ENSCPBG00000026327	SLIRP	85	52.381	Chrysemys_picta_bellii
ENSCCAG00000030130	SLIRP	69	86.486	ENSCANG00000032892	SLIRP	97	80.000	Colobus_angolensis_palliatus
ENSCCAG00000030130	SLIRP	100	70.270	ENSCGRG00001024068	Slirp	100	70.270	Cricetulus_griseus_chok1gshd
ENSCCAG00000030130	SLIRP	100	70.270	ENSCGRG00000017440	Slirp	100	70.270	Cricetulus_griseus_crigri
ENSCCAG00000030130	SLIRP	66	56.338	ENSCSEG00000015766	slirp	72	56.338	Cynoglossus_semilaevis
ENSCCAG00000030130	SLIRP	63	60.870	ENSCVAG00000012504	slirp	68	60.870	Cyprinodon_variegatus
ENSCCAG00000030130	SLIRP	69	56.000	ENSDARG00000097753	slirp	85	51.111	Danio_rerio
ENSCCAG00000030130	SLIRP	81	72.222	ENSDNOG00000007721	SLIRP	100	65.455	Dasypus_novemcinctus
ENSCCAG00000030130	SLIRP	100	73.874	ENSDORG00000012379	Slirp	100	73.874	Dipodomys_ordii
ENSCCAG00000030130	SLIRP	90	74.227	ENSETEG00000010345	SLIRP	100	72.222	Echinops_telfairi
ENSCCAG00000030130	SLIRP	100	81.081	ENSEASG00005020193	SLIRP	100	81.081	Equus_asinus_asinus
ENSCCAG00000030130	SLIRP	92	56.436	ENSEEUG00000007257	SLIRP	100	56.436	Erinaceus_europaeus
ENSCCAG00000030130	SLIRP	69	55.405	ENSELUG00000016800	slirp	73	55.405	Esox_lucius
ENSCCAG00000030130	SLIRP	82	83.146	ENSFCAG00000036326	SLIRP	91	83.146	Felis_catus
ENSCCAG00000030130	SLIRP	66	50.704	ENSFALG00000012583	SLIRP	88	47.872	Ficedula_albicollis
ENSCCAG00000030130	SLIRP	97	68.142	ENSFDAG00000008347	SLIRP	100	68.142	Fukomys_damarensis
ENSCCAG00000030130	SLIRP	60	55.385	ENSFHEG00000004709	slirp	71	55.385	Fundulus_heteroclitus
ENSCCAG00000030130	SLIRP	81	48.864	ENSGMOG00000016948	slirp	71	56.757	Gadus_morhua
ENSCCAG00000030130	SLIRP	78	46.429	ENSGALG00000031238	SLIRP	89	47.059	Gallus_gallus
ENSCCAG00000030130	SLIRP	81	53.933	ENSGAFG00000010998	slirp	89	53.933	Gambusia_affinis
ENSCCAG00000030130	SLIRP	72	53.012	ENSGACG00000020137	slirp	97	53.012	Gasterosteus_aculeatus
ENSCCAG00000030130	SLIRP	85	52.128	ENSGAGG00000009953	SLIRP	65	52.128	Gopherus_agassizii
ENSCCAG00000030130	SLIRP	89	82.727	ENSGGOG00000011059	-	100	81.452	Gorilla_gorilla
ENSCCAG00000030130	SLIRP	100	66.667	ENSHGLG00000018491	SLIRP	100	66.667	Heterocephalus_glaber_female
ENSCCAG00000030130	SLIRP	100	66.667	ENSHGLG00100014153	SLIRP	100	66.667	Heterocephalus_glaber_male
ENSCCAG00000030130	SLIRP	70	61.039	ENSHCOG00000006795	slirp	78	61.039	Hippocampus_comes
ENSCCAG00000030130	SLIRP	80	51.724	ENSIPUG00000010214	SLIRP	87	51.724	Ictalurus_punctatus
ENSCCAG00000030130	SLIRP	90	77.000	ENSSTOG00000034316	SLIRP	100	76.577	Ictidomys_tridecemlineatus
ENSCCAG00000030130	SLIRP	81	43.011	ENSKMAG00000002038	slirp	89	43.011	Kryptolebias_marmoratus
ENSCCAG00000030130	SLIRP	81	52.273	ENSLBEG00000007564	slirp	88	52.273	Labrus_bergylta
ENSCCAG00000030130	SLIRP	81	50.000	ENSLACG00000013434	SLIRP	87	50.000	Latimeria_chalumnae
ENSCCAG00000030130	SLIRP	90	81.633	ENSMFAG00000042960	SLIRP	100	79.817	Macaca_fascicularis
ENSCCAG00000030130	SLIRP	90	81.633	ENSMMUG00000029256	SLIRP	100	80.734	Macaca_mulatta
ENSCCAG00000030130	SLIRP	90	81.633	ENSMNEG00000028921	SLIRP	100	79.817	Macaca_nemestrina
ENSCCAG00000030130	SLIRP	100	75.806	ENSMLEG00000043644	SLIRP	97	80.000	Mandrillus_leucophaeus
ENSCCAG00000030130	SLIRP	81	52.273	ENSMZEG00005004617	slirp	89	52.273	Maylandia_zebra
ENSCCAG00000030130	SLIRP	100	72.973	ENSMAUG00000003857	Slirp	100	72.973	Mesocricetus_auratus
ENSCCAG00000030130	SLIRP	100	74.194	ENSMICG00000012080	SLIRP	100	74.194	Microcebus_murinus
ENSCCAG00000030130	SLIRP	98	76.147	ENSMOCG00000016019	Slirp	97	76.147	Microtus_ochrogaster
ENSCCAG00000030130	SLIRP	69	56.757	ENSMMOG00000018268	slirp	74	56.757	Mola_mola
ENSCCAG00000030130	SLIRP	62	66.176	ENSMODG00000005207	-	96	66.176	Monodelphis_domestica
ENSCCAG00000030130	SLIRP	69	56.000	ENSMALG00000012581	slirp	77	56.000	Monopterus_albus
ENSCCAG00000030130	SLIRP	97	75.000	MGP_CAROLIEiJ_G0017995	Slirp	100	75.000	Mus_caroli
ENSCCAG00000030130	SLIRP	98	75.229	ENSMUSG00000021040	Slirp	97	75.229	Mus_musculus
ENSCCAG00000030130	SLIRP	98	75.229	MGP_SPRETEiJ_G0018840	Slirp	97	75.229	Mus_spretus
ENSCCAG00000030130	SLIRP	85	78.947	ENSMLUG00000024998	-	100	74.775	Myotis_lucifugus
ENSCCAG00000030130	SLIRP	90	76.000	ENSMLUG00000029544	-	100	72.973	Myotis_lucifugus
ENSCCAG00000030130	SLIRP	91	74.757	ENSNGAG00000016363	Slirp	99	74.757	Nannospalax_galili
ENSCCAG00000030130	SLIRP	100	79.839	ENSNLEG00000032459	-	100	79.839	Nomascus_leucogenys
ENSCCAG00000030130	SLIRP	93	73.267	ENSNLEG00000027238	-	97	73.267	Nomascus_leucogenys
ENSCCAG00000030130	SLIRP	98	74.312	ENSODEG00000012580	SLIRP	99	76.923	Octodon_degus
ENSCCAG00000030130	SLIRP	69	58.108	ENSONIG00000011692	slirp	75	58.108	Oreochromis_niloticus
ENSCCAG00000030130	SLIRP	99	53.271	ENSOANG00000022366	SLIRP	96	53.271	Ornithorhynchus_anatinus
ENSCCAG00000030130	SLIRP	81	52.273	ENSORLG00000010761	slirp	68	52.273	Oryzias_latipes
ENSCCAG00000030130	SLIRP	69	59.459	ENSORLG00020022188	slirp	74	59.459	Oryzias_latipes_hni
ENSCCAG00000030130	SLIRP	81	52.273	ENSORLG00015020171	slirp	87	52.273	Oryzias_latipes_hsok
ENSCCAG00000030130	SLIRP	81	53.409	ENSOMEG00000019321	slirp	88	53.409	Oryzias_melastigma
ENSCCAG00000030130	SLIRP	89	82.727	ENSPPAG00000040710	-	100	81.452	Pan_paniscus
ENSCCAG00000030130	SLIRP	82	83.146	ENSPPRG00000014350	SLIRP	91	83.146	Panthera_pardus
ENSCCAG00000030130	SLIRP	82	83.146	ENSPTIG00000014196	SLIRP	91	83.146	Panthera_tigris_altaica
ENSCCAG00000030130	SLIRP	89	82.727	ENSPTRG00000030691	SLIRP	100	81.452	Pan_troglodytes
ENSCCAG00000030130	SLIRP	100	81.651	ENSPANG00000026323	SLIRP	100	81.651	Papio_anubis
ENSCCAG00000030130	SLIRP	63	52.941	ENSPKIG00000008831	slirp	67	52.941	Paramormyrops_kingsleyae
ENSCCAG00000030130	SLIRP	62	64.706	ENSPMGG00000010541	slirp	78	64.706	Periophthalmus_magnuspinnatus
ENSCCAG00000030130	SLIRP	88	72.727	ENSPEMG00000013234	Slirp	96	70.909	Peromyscus_maniculatus_bairdii
ENSCCAG00000030130	SLIRP	63	50.000	ENSPMAG00000009355	slirp	76	50.000	Petromyzon_marinus
ENSCCAG00000030130	SLIRP	77	56.977	ENSPCIG00000026842	-	92	56.977	Phascolarctos_cinereus
ENSCCAG00000030130	SLIRP	81	53.409	ENSPFOG00000006758	slirp	88	53.409	Poecilia_formosa
ENSCCAG00000030130	SLIRP	81	52.273	ENSPLAG00000011140	slirp	88	52.273	Poecilia_latipinna
ENSCCAG00000030130	SLIRP	81	53.409	ENSPMEG00000019535	slirp	88	53.409	Poecilia_mexicana
ENSCCAG00000030130	SLIRP	81	52.273	ENSPREG00000011673	slirp	88	52.273	Poecilia_reticulata
ENSCCAG00000030130	SLIRP	88	72.632	ENSPPYG00000006030	SLIRP	97	71.698	Pongo_abelii
ENSCCAG00000030130	SLIRP	100	70.968	ENSPCOG00000015159	SLIRP	100	70.968	Propithecus_coquereli
ENSCCAG00000030130	SLIRP	73	62.025	ENSPNAG00000008633	slirp	80	62.025	Pygocentrus_nattereri
ENSCCAG00000030130	SLIRP	71	83.117	ENSRBIG00000032998	-	82	80.899	Rhinopithecus_bieti
ENSCCAG00000030130	SLIRP	82	74.157	ENSRBIG00000031396	-	100	74.000	Rhinopithecus_bieti
ENSCCAG00000030130	SLIRP	90	81.443	ENSRBIG00000032222	-	100	80.556	Rhinopithecus_bieti
ENSCCAG00000030130	SLIRP	88	75.789	ENSRBIG00000035817	-	100	75.472	Rhinopithecus_bieti
ENSCCAG00000030130	SLIRP	76	79.518	ENSRROG00000017133	-	98	78.723	Rhinopithecus_roxellana
ENSCCAG00000030130	SLIRP	90	80.412	ENSRROG00000036656	-	100	79.630	Rhinopithecus_roxellana
ENSCCAG00000030130	SLIRP	82	75.281	ENSRROG00000035604	-	100	75.000	Rhinopithecus_roxellana
ENSCCAG00000030130	SLIRP	81	77.273	ENSRROG00000041312	-	95	76.768	Rhinopithecus_roxellana
ENSCCAG00000030130	SLIRP	100	87.097	ENSSBOG00000020014	SLIRP	99	87.097	Saimiri_boliviensis_boliviensis
ENSCCAG00000030130	SLIRP	78	56.322	ENSSFOG00015011165	slirp	88	56.322	Scleropages_formosus
ENSCCAG00000030130	SLIRP	69	44.595	ENSSMAG00000012930	slirp	73	44.595	Scophthalmus_maximus
ENSCCAG00000030130	SLIRP	69	62.162	ENSSLDG00000023136	slirp	79	52.874	Seriola_lalandi_dorsalis
ENSCCAG00000030130	SLIRP	81	51.136	ENSSPUG00000009346	SLIRP	90	51.136	Sphenodon_punctatus
ENSCCAG00000030130	SLIRP	69	54.054	ENSSPAG00000013477	slirp	74	54.054	Stegastes_partitus
ENSCCAG00000030130	SLIRP	100	77.477	ENSSSCG00000028167	SLIRP	100	77.477	Sus_scrofa
ENSCCAG00000030130	SLIRP	66	53.521	ENSTGUG00000012337	SLIRP	88	50.000	Taeniopygia_guttata
ENSCCAG00000030130	SLIRP	99	45.133	ENSTRUG00000020127	slirp	74	54.667	Takifugu_rubripes
ENSCCAG00000030130	SLIRP	100	77.477	ENSUAMG00000022445	SLIRP	100	77.477	Ursus_americanus
ENSCCAG00000030130	SLIRP	100	78.378	ENSUMAG00000007166	SLIRP	100	78.378	Ursus_maritimus
ENSCCAG00000030130	SLIRP	100	78.704	ENSVPAG00000001781	SLIRP	100	78.704	Vicugna_pacos
ENSCCAG00000030130	SLIRP	85	80.000	ENSVVUG00000004436	SLIRP	100	76.577	Vulpes_vulpes
ENSCCAG00000030130	SLIRP	65	58.571	ENSXETG00000030343	SLIRP	80	57.746	Xenopus_tropicalis
ENSCCAG00000030130	SLIRP	81	52.273	ENSXCOG00000009422	slirp	88	52.273	Xiphophorus_couchianus
ENSCCAG00000030130	SLIRP	81	53.409	ENSXMAG00000015655	slirp	88	53.409	Xiphophorus_maculatus