EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000030237 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: THO complex subunit 4 pseudogene
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 4143 bases
Position: chrKV389951.1:236014-240156
Accession: 108293233
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000024898	RRM_1	PF00076.22	1.5e-10	1	1
ENSCCAP00000024878	RRM_1	PF00076.22	3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000042415	-	651	-	ENSCCAP00000024898	216 (aa)	-	A0A2K5R9U7
ENSCCAT00000042395	-	597	-	ENSCCAP00000024878	198 (aa)	-	A0A2K5R9S8

Gene Model

Click here to download ENSCCAG00000030237's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000030237's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000030237	-	100	74.708	ENSCCAG00000020578	-	93	85.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000030237	-	100	73.152	ENSG00000183684	ALYREF	97	76.265	Homo_sapiens
ENSCCAG00000030237	-	100	56.777	ENSAPOG00000018455	ALYREF	100	60.073	Acanthochromis_polyacanthus
ENSCCAG00000030237	-	87	74.020	ENSAMEG00000017463	ALYREF	83	75.980	Ailuropoda_melanoleuca
ENSCCAG00000030237	-	87	77.157	ENSACAG00000010526	ALYREF	100	67.969	Anolis_carolinensis
ENSCCAG00000030237	-	100	81.944	ENSANAG00000028229	-	77	81.481	Aotus_nancymaae
ENSCCAG00000030237	-	76	90.909	ENSANAG00000022638	-	68	90.909	Aotus_nancymaae
ENSCCAG00000030237	-	100	72.374	ENSBTAG00000008498	ALYREF	100	75.097	Bos_taurus
ENSCCAG00000030237	-	100	71.984	ENSCJAG00000039942	ALYREF	93	85.714	Callithrix_jacchus
ENSCCAG00000030237	-	100	71.595	ENSCAFG00000005877	ALYREF	100	74.319	Canis_familiaris
ENSCCAG00000030237	-	100	76.471	ENSCAFG00020009815	ALYREF	100	78.281	Canis_lupus_dingo
ENSCCAG00000030237	-	99	83.562	ENSCHIG00000017396	ALYREF	92	86.758	Capra_hircus
ENSCCAG00000030237	-	84	81.319	ENSTSYG00000002272	ALYREF	77	84.066	Carlito_syrichta
ENSCCAG00000030237	-	57	80.451	ENSCAPG00000014727	-	100	82.707	Cavia_aperea
ENSCCAG00000030237	-	100	84.234	ENSCPOG00000013710	ALYREF	100	86.937	Cavia_porcellus
ENSCCAG00000030237	-	100	73.152	ENSCATG00000033169	ALYREF	93	85.143	Cercocebus_atys
ENSCCAG00000030237	-	100	77.419	ENSCLAG00000015026	ALYREF	100	82.569	Chinchilla_lanigera
ENSCCAG00000030237	-	100	73.152	ENSCSAG00000002216	ALYREF	97	76.265	Chlorocebus_sabaeus
ENSCCAG00000030237	-	85	85.792	ENSCANG00000034056	ALYREF	95	85.792	Colobus_angolensis_palliatus
ENSCCAG00000030237	-	100	83.408	ENSCGRG00001018191	-	100	84.305	Cricetulus_griseus_chok1gshd
ENSCCAG00000030237	-	83	79.255	ENSCGRG00000015871	-	98	76.531	Cricetulus_griseus_crigri
ENSCCAG00000030237	-	84	52.299	ENSCSEG00000015438	-	96	55.367	Cynoglossus_semilaevis
ENSCCAG00000030237	-	78	80.337	ENSDNOG00000002563	ALYREF	84	77.889	Dasypus_novemcinctus
ENSCCAG00000030237	-	90	74.757	ENSDORG00000025849	-	84	74.757	Dipodomys_ordii
ENSCCAG00000030237	-	78	84.091	ENSETEG00000016596	ALYREF	100	83.523	Echinops_telfairi
ENSCCAG00000030237	-	99	75.229	ENSEASG00005005824	ALYREF	95	74.708	Equus_asinus_asinus
ENSCCAG00000030237	-	99	75.229	ENSECAG00000018754	ALYREF	95	74.708	Equus_caballus
ENSCCAG00000030237	-	84	82.456	ENSEEUG00000010164	ALYREF	100	83.041	Erinaceus_europaeus
ENSCCAG00000030237	-	100	72.374	ENSFCAG00000022549	ALYREF	98	75.097	Felis_catus
ENSCCAG00000030237	-	88	77.487	ENSFDAG00000001213	ALYREF	92	81.152	Fukomys_damarensis
ENSCCAG00000030237	-	100	71.765	ENSGALG00000007237	ALYREF	100	70.196	Gallus_gallus
ENSCCAG00000030237	-	100	60.385	ENSGACG00000013328	ALYREF	100	61.923	Gasterosteus_aculeatus
ENSCCAG00000030237	-	100	69.767	ENSGAGG00000008536	ALYREF	100	71.318	Gopherus_agassizii
ENSCCAG00000030237	-	100	73.541	ENSGGOG00000013935	ALYREF	93	85.714	Gorilla_gorilla
ENSCCAG00000030237	-	100	80.000	ENSHGLG00000008293	ALYREF	100	85.068	Heterocephalus_glaber_female
ENSCCAG00000030237	-	88	69.507	ENSHGLG00100006949	ALYREF	95	70.852	Heterocephalus_glaber_male
ENSCCAG00000030237	-	100	58.955	ENSHCOG00000015046	ALYREF	100	60.300	Hippocampus_comes
ENSCCAG00000030237	-	100	72.941	ENSJJAG00000004134	-	100	74.118	Jaculus_jaculus
ENSCCAG00000030237	-	100	62.934	ENSLACG00000005694	ALYREF	100	65.637	Latimeria_chalumnae
ENSCCAG00000030237	-	82	81.283	ENSLAFG00000003083	ALYREF	100	82.353	Loxodonta_africana
ENSCCAG00000030237	-	100	72.400	ENSMFAG00000001394	ALYREF	97	76.096	Macaca_fascicularis
ENSCCAG00000030237	-	100	73.152	ENSMMUG00000012884	ALYREF	93	85.143	Macaca_mulatta
ENSCCAG00000030237	-	100	73.152	ENSMNEG00000043666	ALYREF	89	85.143	Macaca_nemestrina
ENSCCAG00000030237	-	86	85.484	ENSMLEG00000043353	ALYREF	87	85.484	Mandrillus_leucophaeus
ENSCCAG00000030237	-	100	77.880	ENSMAUG00000020552	-	100	79.263	Mesocricetus_auratus
ENSCCAG00000030237	-	100	72.266	ENSMICG00000017403	ALYREF	93	84.571	Microcebus_murinus
ENSCCAG00000030237	-	100	78.802	ENSMOCG00000016792	-	100	82.949	Microtus_ochrogaster
ENSCCAG00000030237	-	99	71.206	ENSMODG00000003030	ALYREF	84	72.374	Monodelphis_domestica
ENSCCAG00000030237	-	100	60.886	ENSMALG00000019408	ALYREF	100	61.852	Monopterus_albus
ENSCCAG00000030237	-	100	78.027	MGP_CAROLIEiJ_G0014874	Alyref2	100	74.439	Mus_caroli
ENSCCAG00000030237	-	100	72.549	MGP_CAROLIEiJ_G0017529	Alyref	100	75.294	Mus_caroli
ENSCCAG00000030237	-	100	61.983	ENSMUSG00000086727	4931428L18Rik	100	59.336	Mus_musculus
ENSCCAG00000030237	-	100	60.744	ENSMUSG00000117091	AC153137.1	100	58.506	Mus_musculus
ENSCCAG00000030237	-	89	64.286	ENSMUSG00000112931	Gm4303	62	68.889	Mus_musculus
ENSCCAG00000030237	-	89	64.286	ENSMUSG00000096744	Gm4307	62	68.889	Mus_musculus
ENSCCAG00000030237	-	100	72.549	ENSMUSG00000025134	Alyref	100	75.294	Mus_musculus
ENSCCAG00000030237	-	100	60.536	ENSMUSG00000097427	Gm6763	98	67.133	Mus_musculus
ENSCCAG00000030237	-	100	80.275	ENSMUSG00000060244	Alyref2	100	82.110	Mus_musculus
ENSCCAG00000030237	-	100	60.536	ENSMUSG00000097878	Gm8764	98	67.133	Mus_musculus
ENSCCAG00000030237	-	100	60.536	ENSMUSG00000091779	Gm21293	100	55.556	Mus_musculus
ENSCCAG00000030237	-	100	60.536	ENSMUSG00000095022	Gm20765	100	55.556	Mus_musculus
ENSCCAG00000030237	-	89	64.286	ENSMUSG00000112856	Gm4305	62	68.889	Mus_musculus
ENSCCAG00000030237	-	90	63.981	ENSMUSG00000094314	Gm4301	62	67.778	Mus_musculus
ENSCCAG00000030237	-	100	60.536	ENSMUSG00000097550	Gm21304	100	55.556	Mus_musculus
ENSCCAG00000030237	-	90	64.455	ENSMUSG00000091101	Gm4302	61	68.889	Mus_musculus
ENSCCAG00000030237	-	100	59.623	ENSMUSG00000090854	Gm4340	100	54.717	Mus_musculus
ENSCCAG00000030237	-	100	60.536	ENSMUSG00000094144	Gm21312	100	55.556	Mus_musculus
ENSCCAG00000030237	-	90	63.981	ENSMUSG00000096640	Gm4312	62	67.778	Mus_musculus
ENSCCAG00000030237	-	83	70.213	MGP_PahariEiJ_G0027255	-	80	70.556	Mus_pahari
ENSCCAG00000030237	-	83	70.213	MGP_PahariEiJ_G0027254	-	82	70.556	Mus_pahari
ENSCCAG00000030237	-	100	72.549	MGP_PahariEiJ_G0018655	-	100	75.294	Mus_pahari
ENSCCAG00000030237	-	87	74.444	MGP_PahariEiJ_G0018656	-	99	74.468	Mus_pahari
ENSCCAG00000030237	-	100	72.549	MGP_SPRETEiJ_G0018373	Alyref	100	75.294	Mus_spretus
ENSCCAG00000030237	-	100	79.817	MGP_SPRETEiJ_G0015679	Alyref2	100	81.651	Mus_spretus
ENSCCAG00000030237	-	78	52.212	MGP_SPRETEiJ_G0016590	-	55	71.774	Mus_spretus
ENSCCAG00000030237	-	98	58.515	ENSMLUG00000024976	-	79	56.957	Myotis_lucifugus
ENSCCAG00000030237	-	98	53.191	ENSMLUG00000015043	-	98	52.766	Myotis_lucifugus
ENSCCAG00000030237	-	75	58.046	ENSMLUG00000028343	-	83	57.471	Myotis_lucifugus
ENSCCAG00000030237	-	98	54.150	ENSMLUG00000002626	-	98	53.755	Myotis_lucifugus
ENSCCAG00000030237	-	98	60.086	ENSMLUG00000025677	-	77	58.369	Myotis_lucifugus
ENSCCAG00000030237	-	88	75.127	ENSMLUG00000009555	-	72	77.157	Myotis_lucifugus
ENSCCAG00000030237	-	98	56.223	ENSMLUG00000022869	-	81	54.506	Myotis_lucifugus
ENSCCAG00000030237	-	98	58.150	ENSMLUG00000024447	-	76	57.269	Myotis_lucifugus
ENSCCAG00000030237	-	98	53.586	ENSMLUG00000024471	-	82	53.165	Myotis_lucifugus
ENSCCAG00000030237	-	98	59.740	ENSMLUG00000027352	-	77	60.088	Myotis_lucifugus
ENSCCAG00000030237	-	100	43.893	ENSMLUG00000023213	-	100	43.130	Myotis_lucifugus
ENSCCAG00000030237	-	98	58.798	ENSMLUG00000030407	-	77	56.652	Myotis_lucifugus
ENSCCAG00000030237	-	98	66.234	ENSMLUG00000027516	-	78	64.935	Myotis_lucifugus
ENSCCAG00000030237	-	97	59.825	ENSMLUG00000026271	-	79	58.079	Myotis_lucifugus
ENSCCAG00000030237	-	100	73.541	ENSNLEG00000010313	ALYREF	93	85.714	Nomascus_leucogenys
ENSCCAG00000030237	-	90	59.524	ENSMEUG00000002210	ALYREF	92	62.381	Notamacropus_eugenii
ENSCCAG00000030237	-	57	79.699	ENSOPRG00000005551	-	52	81.203	Ochotona_princeps
ENSCCAG00000030237	-	100	70.385	ENSODEG00000008359	ALYREF	100	73.846	Octodon_degus
ENSCCAG00000030237	-	100	59.480	ENSORLG00000012331	ALYREF	99	61.961	Oryzias_latipes
ENSCCAG00000030237	-	78	82.486	ENSOGAG00000012409	ALYREF	76	84.181	Otolemur_garnettii
ENSCCAG00000030237	-	78	82.022	ENSOARG00000017932	ALYREF	74	78.392	Ovis_aries
ENSCCAG00000030237	-	100	72.374	ENSPPRG00000010829	ALYREF	98	75.097	Panthera_pardus
ENSCCAG00000030237	-	57	89.516	ENSPTIG00000006399	ALYREF	69	89.516	Panthera_tigris_altaica
ENSCCAG00000030237	-	100	73.541	ENSPTRG00000009774	ALYREF	93	85.714	Pan_troglodytes
ENSCCAG00000030237	-	100	73.152	ENSPANG00000019265	ALYREF	93	85.143	Papio_anubis
ENSCCAG00000030237	-	56	78.195	ENSPSIG00000017541	ALYREF	98	81.203	Pelodiscus_sinensis
ENSCCAG00000030237	-	100	73.152	ENSPPYG00000008749	ALYREF	97	76.654	Pongo_abelii
ENSCCAG00000030237	-	100	72.266	ENSPCOG00000020874	ALYREF	93	84.571	Propithecus_coquereli
ENSCCAG00000030237	-	100	65.748	ENSPVAG00000017866	ALYREF	100	67.578	Pteropus_vampyrus
ENSCCAG00000030237	-	85	81.143	ENSRNOG00000036687	Alyref	93	84.000	Rattus_norvegicus
ENSCCAG00000030237	-	78	82.022	ENSRBIG00000039651	ALYREF	72	82.022	Rhinopithecus_bieti
ENSCCAG00000030237	-	90	78.199	ENSRROG00000045364	ALYREF	83	81.991	Rhinopithecus_roxellana
ENSCCAG00000030237	-	83	78.421	ENSSHAG00000010459	ALYREF	98	79.474	Sarcophilus_harrisii
ENSCCAG00000030237	-	100	48.120	ENSSDUG00000003992	-	100	48.315	Seriola_dumerili
ENSCCAG00000030237	-	100	48.669	ENSSLDG00000005386	-	100	49.242	Seriola_lalandi_dorsalis
ENSCCAG00000030237	-	100	68.605	ENSSPUG00000004600	ALYREF	100	68.605	Sphenodon_punctatus
ENSCCAG00000030237	-	100	56.934	ENSSPAG00000011178	ALYREF	97	59.854	Stegastes_partitus
ENSCCAG00000030237	-	100	73.047	ENSSSCG00000032655	ALYREF	100	75.000	Sus_scrofa
ENSCCAG00000030237	-	58	78.519	ENSTGUG00000003513	ALYREF	100	75.556	Taeniopygia_guttata
ENSCCAG00000030237	-	100	59.925	ENSTRUG00000008828	ALYREF	100	60.526	Takifugu_rubripes
ENSCCAG00000030237	-	78	80.337	ENSTBEG00000005834	ALYREF	100	80.899	Tupaia_belangeri
ENSCCAG00000030237	-	100	70.817	ENSTTRG00000012275	ALYREF	100	73.541	Tursiops_truncatus
ENSCCAG00000030237	-	86	61.429	ENSUAMG00000016931	ALYREF	79	62.857	Ursus_americanus
ENSCCAG00000030237	-	86	61.429	ENSUMAG00000016384	ALYREF	79	62.857	Ursus_maritimus
ENSCCAG00000030237	-	100	71.308	ENSXETG00000005391	alyref	100	73.418	Xenopus_tropicalis