EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000030367 (Gene tree)
Gene ID: 108312212
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 200314 bases
Position: chrKV389548.1:5297875-5498188
Accession: 108312212
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000025197	R3H	PF01424.22	5.8e-05	1	1
ENSCCAP00000025209	RNA_bind	PF08675.11	1.1e-33	1	1
ENSCCAP00000025197	RNA_bind	PF08675.11	1.6e-33	1	1
ENSCCAP00000025197	CAF1	PF04857.20	5.8e-89	1	1
ENSCCAP00000025209	CAF1	PF04857.20	7.1e-52	1	2
ENSCCAP00000025209	CAF1	PF04857.20	7.1e-52	2	2
ENSCCAP00000025215	CAF1	PF04857.20	8.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000042737	PARN-203	198	-	ENSCCAP00000025215	65 (aa)	-	A0A2K5RAR4
ENSCCAT00000042731	PARN-202	1395	-	ENSCCAP00000025209	464 (aa)	-	A0A2K5RAR0
ENSCCAT00000042719	PARN-201	3083	XM_017540011	ENSCCAP00000025197	639 (aa)	XP_017395500	A0A2K5RAN0

Gene Model

Click here to download ENSCCAG00000030367's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000030367's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000030367	PARN	100	100.000	ENSG00000140694	PARN	100	100.000	Homo_sapiens
ENSCCAG00000030367	PARN	92	80.000	ENSAPOG00000019730	-	100	69.683	Acanthochromis_polyacanthus
ENSCCAG00000030367	PARN	100	96.610	ENSAMEG00000011208	PARN	100	92.344	Ailuropoda_melanoleuca
ENSCCAG00000030367	PARN	92	78.333	ENSACIG00000000619	parn	83	76.679	Amphilophus_citrinellus
ENSCCAG00000030367	PARN	94	77.966	ENSAOCG00000003465	parn	84	73.604	Amphiprion_ocellaris
ENSCCAG00000030367	PARN	74	77.987	ENSAPEG00000010661	parn	91	77.987	Amphiprion_percula
ENSCCAG00000030367	PARN	91	76.271	ENSATEG00000004661	parn	83	74.829	Anabas_testudineus
ENSCCAG00000030367	PARN	99	87.037	ENSAPLG00000013914	PARN	99	84.227	Anas_platyrhynchos
ENSCCAG00000030367	PARN	100	89.831	ENSACAG00000004973	PARN	100	80.308	Anolis_carolinensis
ENSCCAG00000030367	PARN	100	100.000	ENSANAG00000031516	PARN	100	100.000	Aotus_nancymaae
ENSCCAG00000030367	PARN	94	77.966	ENSACLG00000004742	parn	85	74.199	Astatotilapia_calliptera
ENSCCAG00000030367	PARN	91	79.661	ENSAMXG00000012390	parn	92	72.870	Astyanax_mexicanus
ENSCCAG00000030367	PARN	100	98.305	ENSBTAG00000018097	PARN	100	92.907	Bos_taurus
ENSCCAG00000030367	PARN	100	100.000	ENSCJAG00000015866	PARN	100	100.000	Callithrix_jacchus
ENSCCAG00000030367	PARN	100	94.915	ENSCAFG00000018795	PARN	100	92.488	Canis_familiaris
ENSCCAG00000030367	PARN	100	96.610	ENSCAFG00020024126	PARN	100	92.488	Canis_lupus_dingo
ENSCCAG00000030367	PARN	100	98.305	ENSCHIG00000018143	PARN	100	93.427	Capra_hircus
ENSCCAG00000030367	PARN	60	77.500	ENSCAPG00000007984	PARN	78	63.202	Cavia_aperea
ENSCCAG00000030367	PARN	100	98.305	ENSCPOG00000002263	PARN	100	90.297	Cavia_porcellus
ENSCCAG00000030367	PARN	91	100.000	ENSCATG00000041368	PARN	100	100.000	Cercocebus_atys
ENSCCAG00000030367	PARN	52	36.552	ENSCATG00000033196	PNLDC1	70	36.552	Cercocebus_atys
ENSCCAG00000030367	PARN	100	96.610	ENSCLAG00000015406	PARN	99	90.454	Chinchilla_lanigera
ENSCCAG00000030367	PARN	100	100.000	ENSCSAG00000008142	PARN	100	98.279	Chlorocebus_sabaeus
ENSCCAG00000030367	PARN	98	98.077	ENSCHOG00000007014	PARN	100	76.424	Choloepus_hoffmanni
ENSCCAG00000030367	PARN	88	85.027	ENSCPBG00000006609	PARN	97	85.102	Chrysemys_picta_bellii
ENSCCAG00000030367	PARN	88	47.368	ENSCING00000010142	-	99	44.465	Ciona_intestinalis
ENSCCAG00000030367	PARN	100	100.000	ENSCANG00000028849	-	100	100.000	Colobus_angolensis_palliatus
ENSCCAG00000030367	PARN	91	100.000	ENSCANG00000023734	-	100	85.909	Colobus_angolensis_palliatus
ENSCCAG00000030367	PARN	100	96.610	ENSCGRG00001012096	Parn	100	85.202	Cricetulus_griseus_chok1gshd
ENSCCAG00000030367	PARN	100	96.610	ENSCGRG00000004939	Parn	100	85.202	Cricetulus_griseus_crigri
ENSCCAG00000030367	PARN	94	79.661	ENSCSEG00000002064	parn	100	65.158	Cynoglossus_semilaevis
ENSCCAG00000030367	PARN	91	77.966	ENSCVAG00000014848	parn	83	73.630	Cyprinodon_variegatus
ENSCCAG00000030367	PARN	100	71.186	ENSDARG00000102634	parn	100	59.259	Danio_rerio
ENSCCAG00000030367	PARN	100	98.305	ENSDNOG00000000833	PARN	100	92.645	Dasypus_novemcinctus
ENSCCAG00000030367	PARN	91	96.610	ENSDORG00000027812	-	100	87.727	Dipodomys_ordii
ENSCCAG00000030367	PARN	92	95.000	ENSETEG00000014828	-	78	93.916	Echinops_telfairi
ENSCCAG00000030367	PARN	76	52.101	ENSEBUG00000007052	PARN	70	70.536	Eptatretus_burgeri
ENSCCAG00000030367	PARN	100	98.305	ENSEASG00005011400	PARN	100	92.801	Equus_asinus_asinus
ENSCCAG00000030367	PARN	100	96.610	ENSECAG00000017792	PARN	100	92.645	Equus_caballus
ENSCCAG00000030367	PARN	92	96.667	ENSEEUG00000010370	PARN	86	83.710	Erinaceus_europaeus
ENSCCAG00000030367	PARN	91	79.661	ENSELUG00000013139	parn	77	72.804	Esox_lucius
ENSCCAG00000030367	PARN	100	96.610	ENSFCAG00000044961	PARN	100	96.610	Felis_catus
ENSCCAG00000030367	PARN	58	30.585	ENSFALG00000012081	PNLDC1	70	30.105	Ficedula_albicollis
ENSCCAG00000030367	PARN	98	88.462	ENSFALG00000003911	PARN	98	82.911	Ficedula_albicollis
ENSCCAG00000030367	PARN	100	98.305	ENSFDAG00000009234	PARN	100	89.828	Fukomys_damarensis
ENSCCAG00000030367	PARN	98	71.875	ENSFHEG00000013738	parn	100	71.875	Fundulus_heteroclitus
ENSCCAG00000030367	PARN	91	77.966	ENSGMOG00000003231	parn	97	76.866	Gadus_morhua
ENSCCAG00000030367	PARN	100	91.525	ENSGALG00000003091	PARN	100	82.271	Gallus_gallus
ENSCCAG00000030367	PARN	91	79.661	ENSGAFG00000011061	parn	84	73.154	Gambusia_affinis
ENSCCAG00000030367	PARN	91	74.576	ENSGACG00000019501	parn	100	68.875	Gasterosteus_aculeatus
ENSCCAG00000030367	PARN	70	78.834	ENSGAGG00000023281	PARN	83	78.834	Gopherus_agassizii
ENSCCAG00000030367	PARN	100	100.000	ENSGGOG00000025224	PARN	100	100.000	Gorilla_gorilla
ENSCCAG00000030367	PARN	94	77.966	ENSHBUG00000017906	parn	90	77.654	Haplochromis_burtoni
ENSCCAG00000030367	PARN	100	98.305	ENSHGLG00000010886	PARN	100	90.141	Heterocephalus_glaber_female
ENSCCAG00000030367	PARN	100	98.305	ENSHGLG00100014659	PARN	100	90.141	Heterocephalus_glaber_male
ENSCCAG00000030367	PARN	80	84.615	ENSHCOG00000008683	parn	91	73.724	Hippocampus_comes
ENSCCAG00000030367	PARN	91	69.492	ENSIPUG00000012401	parn	84	62.823	Ictalurus_punctatus
ENSCCAG00000030367	PARN	100	96.610	ENSSTOG00000007519	PARN	100	91.236	Ictidomys_tridecemlineatus
ENSCCAG00000030367	PARN	100	98.305	ENSJJAG00000023049	Parn	100	87.637	Jaculus_jaculus
ENSCCAG00000030367	PARN	94	76.271	ENSKMAG00000009462	parn	84	73.891	Kryptolebias_marmoratus
ENSCCAG00000030367	PARN	91	77.966	ENSLBEG00000009167	parn	90	72.835	Labrus_bergylta
ENSCCAG00000030367	PARN	79	78.770	ENSLACG00000004207	PARN	100	77.358	Latimeria_chalumnae
ENSCCAG00000030367	PARN	96	81.356	ENSLOCG00000000715	parn	87	74.257	Lepisosteus_oculatus
ENSCCAG00000030367	PARN	100	98.305	ENSLAFG00000015036	PARN	100	93.271	Loxodonta_africana
ENSCCAG00000030367	PARN	100	100.000	ENSMFAG00000044852	PARN	100	100.000	Macaca_fascicularis
ENSCCAG00000030367	PARN	100	100.000	ENSMMUG00000018849	PARN	100	100.000	Macaca_mulatta
ENSCCAG00000030367	PARN	100	100.000	ENSMNEG00000045108	PARN	100	100.000	Macaca_nemestrina
ENSCCAG00000030367	PARN	100	100.000	ENSMLEG00000031743	PARN	100	100.000	Mandrillus_leucophaeus
ENSCCAG00000030367	PARN	91	77.966	ENSMAMG00000006939	parn	84	72.697	Mastacembelus_armatus
ENSCCAG00000030367	PARN	94	77.966	ENSMZEG00005013590	parn	90	77.425	Maylandia_zebra
ENSCCAG00000030367	PARN	94	100.000	ENSMGAG00000001004	PARN	95	82.382	Meleagris_gallopavo
ENSCCAG00000030367	PARN	95	94.286	ENSMAUG00000008025	Parn	100	79.784	Mesocricetus_auratus
ENSCCAG00000030367	PARN	100	98.462	ENSMICG00000016053	PARN	100	98.462	Microcebus_murinus
ENSCCAG00000030367	PARN	91	94.915	ENSMOCG00000022211	Parn	100	91.296	Microtus_ochrogaster
ENSCCAG00000030367	PARN	91	79.661	ENSMMOG00000011333	parn	87	76.822	Mola_mola
ENSCCAG00000030367	PARN	92	90.000	ENSMODG00000004915	PARN	99	93.750	Monodelphis_domestica
ENSCCAG00000030367	PARN	91	76.667	ENSMALG00000019426	parn	91	79.143	Monopterus_albus
ENSCCAG00000030367	PARN	100	94.915	MGP_CAROLIEiJ_G0020466	Parn	100	85.915	Mus_caroli
ENSCCAG00000030367	PARN	100	93.220	ENSMUSG00000022685	Parn	100	91.463	Mus_musculus
ENSCCAG00000030367	PARN	100	96.610	MGP_PahariEiJ_G0016172	Parn	100	85.603	Mus_pahari
ENSCCAG00000030367	PARN	100	94.915	MGP_SPRETEiJ_G0021361	Parn	100	85.915	Mus_spretus
ENSCCAG00000030367	PARN	100	98.305	ENSMPUG00000014464	PARN	100	92.958	Mustela_putorius_furo
ENSCCAG00000030367	PARN	91	94.915	ENSMLUG00000005414	PARN	100	94.534	Myotis_lucifugus
ENSCCAG00000030367	PARN	91	98.305	ENSNGAG00000024082	-	100	87.273	Nannospalax_galili
ENSCCAG00000030367	PARN	91	77.966	ENSNBRG00000006805	parn	90	77.154	Neolamprologus_brichardi
ENSCCAG00000030367	PARN	100	100.000	ENSNLEG00000010241	PARN	100	100.000	Nomascus_leucogenys
ENSCCAG00000030367	PARN	93	92.308	ENSMEUG00000008178	-	100	60.759	Notamacropus_eugenii
ENSCCAG00000030367	PARN	98	98.077	ENSOPRG00000012187	PARN	100	85.601	Ochotona_princeps
ENSCCAG00000030367	PARN	100	98.305	ENSODEG00000001617	PARN	100	81.776	Octodon_degus
ENSCCAG00000030367	PARN	100	77.966	ENSONIG00000000151	parn	100	69.846	Oreochromis_niloticus
ENSCCAG00000030367	PARN	82	82.152	ENSOANG00000020155	-	97	82.677	Ornithorhynchus_anatinus
ENSCCAG00000030367	PARN	99	91.071	ENSOCUG00000000322	PARN	100	91.038	Oryctolagus_cuniculus
ENSCCAG00000030367	PARN	100	76.923	ENSORLG00000024893	-	100	68.326	Oryzias_latipes
ENSCCAG00000030367	PARN	91	79.661	ENSORLG00020010313	parn	86	72.881	Oryzias_latipes_hni
ENSCCAG00000030367	PARN	91	79.661	ENSORLG00015000300	parn	86	72.712	Oryzias_latipes_hsok
ENSCCAG00000030367	PARN	91	79.661	ENSOMEG00000019555	parn	97	67.873	Oryzias_melastigma
ENSCCAG00000030367	PARN	92	98.333	ENSOGAG00000014626	PARN	100	94.141	Otolemur_garnettii
ENSCCAG00000030367	PARN	91	98.305	ENSOARG00000007574	PARN	100	97.571	Ovis_aries
ENSCCAG00000030367	PARN	100	100.000	ENSPPAG00000031438	PARN	100	100.000	Pan_paniscus
ENSCCAG00000030367	PARN	100	96.610	ENSPPRG00000018583	PARN	100	96.610	Panthera_pardus
ENSCCAG00000030367	PARN	100	96.610	ENSPTIG00000012135	PARN	100	96.610	Panthera_tigris_altaica
ENSCCAG00000030367	PARN	100	100.000	ENSPTRG00000007792	PARN	100	100.000	Pan_troglodytes
ENSCCAG00000030367	PARN	100	100.000	ENSPANG00000020099	PARN	100	100.000	Papio_anubis
ENSCCAG00000030367	PARN	96	79.661	ENSPKIG00000022807	parn	91	70.238	Paramormyrops_kingsleyae
ENSCCAG00000030367	PARN	98	89.831	ENSPSIG00000014804	PARN	100	82.872	Pelodiscus_sinensis
ENSCCAG00000030367	PARN	91	76.271	ENSPMGG00000014431	parn	75	75.231	Periophthalmus_magnuspinnatus
ENSCCAG00000030367	PARN	100	94.915	ENSPEMG00000018439	Parn	100	83.255	Peromyscus_maniculatus_bairdii
ENSCCAG00000030367	PARN	91	57.627	ENSPMAG00000003956	parn	99	67.500	Petromyzon_marinus
ENSCCAG00000030367	PARN	100	92.308	ENSPCIG00000001259	PARN	100	92.308	Phascolarctos_cinereus
ENSCCAG00000030367	PARN	91	79.661	ENSPFOG00000012823	parn	84	72.727	Poecilia_formosa
ENSCCAG00000030367	PARN	91	79.661	ENSPLAG00000006395	parn	84	72.896	Poecilia_latipinna
ENSCCAG00000030367	PARN	91	79.661	ENSPMEG00000007711	parn	84	73.064	Poecilia_mexicana
ENSCCAG00000030367	PARN	91	79.661	ENSPREG00000000147	parn	84	72.727	Poecilia_reticulata
ENSCCAG00000030367	PARN	100	98.305	ENSPPYG00000007123	PARN	100	97.192	Pongo_abelii
ENSCCAG00000030367	PARN	93	96.154	ENSPCAG00000001741	PARN	100	82.838	Procavia_capensis
ENSCCAG00000030367	PARN	100	98.462	ENSPCOG00000019292	PARN	100	98.462	Propithecus_coquereli
ENSCCAG00000030367	PARN	98	98.077	ENSPVAG00000002547	PARN	100	89.399	Pteropus_vampyrus
ENSCCAG00000030367	PARN	91	77.966	ENSPNYG00000006835	parn	90	74.674	Pundamilia_nyererei
ENSCCAG00000030367	PARN	84	73.557	ENSPNAG00000018905	parn	86	73.557	Pygocentrus_nattereri
ENSCCAG00000030367	PARN	100	93.220	ENSRNOG00000002912	Parn	98	88.889	Rattus_norvegicus
ENSCCAG00000030367	PARN	72	97.898	ENSRBIG00000018726	PARN	100	97.898	Rhinopithecus_bieti
ENSCCAG00000030367	PARN	92	98.333	ENSRROG00000020116	-	86	98.361	Rhinopithecus_roxellana
ENSCCAG00000030367	PARN	72	97.898	ENSRROG00000011162	-	100	97.898	Rhinopithecus_roxellana
ENSCCAG00000030367	PARN	100	100.000	ENSSBOG00000034726	PARN	100	100.000	Saimiri_boliviensis_boliviensis
ENSCCAG00000030367	PARN	83	88.889	ENSSHAG00000008493	PARN	94	92.823	Sarcophilus_harrisii
ENSCCAG00000030367	PARN	94	79.661	ENSSFOG00015014165	parn	94	73.549	Scleropages_formosus
ENSCCAG00000030367	PARN	91	76.271	ENSSMAG00000000685	parn	87	72.140	Scophthalmus_maximus
ENSCCAG00000030367	PARN	94	76.271	ENSSDUG00000014555	parn	83	73.720	Seriola_dumerili
ENSCCAG00000030367	PARN	91	76.271	ENSSLDG00000007603	-	100	64.706	Seriola_lalandi_dorsalis
ENSCCAG00000030367	PARN	91	80.345	ENSSARG00000014339	PARN	100	80.345	Sorex_araneus
ENSCCAG00000030367	PARN	100	89.831	ENSSPUG00000007719	PARN	100	84.977	Sphenodon_punctatus
ENSCCAG00000030367	PARN	91	77.966	ENSSPAG00000007095	parn	86	75.094	Stegastes_partitus
ENSCCAG00000030367	PARN	100	98.305	ENSSSCG00000007878	PARN	89	92.488	Sus_scrofa
ENSCCAG00000030367	PARN	55	30.833	ENSTGUG00000011418	PNLDC1	68	30.833	Taeniopygia_guttata
ENSCCAG00000030367	PARN	99	87.037	ENSTGUG00000004971	PARN	99	82.808	Taeniopygia_guttata
ENSCCAG00000030367	PARN	100	71.212	ENSTRUG00000015208	-	94	71.212	Takifugu_rubripes
ENSCCAG00000030367	PARN	100	79.661	ENSTNIG00000008252	parn	100	69.397	Tetraodon_nigroviridis
ENSCCAG00000030367	PARN	91	79.310	ENSTBEG00000010407	PARN	100	79.310	Tupaia_belangeri
ENSCCAG00000030367	PARN	98	98.077	ENSTTRG00000002843	PARN	100	87.975	Tursiops_truncatus
ENSCCAG00000030367	PARN	68	83.716	ENSUAMG00000008283	PARN	90	83.716	Ursus_americanus
ENSCCAG00000030367	PARN	100	98.305	ENSUMAG00000004527	PARN	100	92.801	Ursus_maritimus
ENSCCAG00000030367	PARN	95	98.077	ENSVPAG00000008968	PARN	100	89.739	Vicugna_pacos
ENSCCAG00000030367	PARN	100	96.610	ENSVVUG00000019509	PARN	100	92.958	Vulpes_vulpes
ENSCCAG00000030367	PARN	100	81.967	ENSXETG00000010994	parn	100	83.080	Xenopus_tropicalis
ENSCCAG00000030367	PARN	91	79.661	ENSXCOG00000015990	parn	96	69.374	Xiphophorus_couchianus
ENSCCAG00000030367	PARN	94	79.661	ENSXMAG00000014783	parn	84	73.401	Xiphophorus_maculatus