EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000030524 (Gene tree)
Gene ID: 108301755
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 101123 bases
Position: chrKV389462.1:5121582-5222704
Accession: 108301755
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000025502	Ago_hook	PF10427.9	9.7e-22	1	1
ENSCCAP00000025538	Ago_hook	PF10427.9	1.2e-21	1	1
ENSCCAP00000025545	Ago_hook	PF10427.9	1.3e-21	1	1
ENSCCAP00000025526	Ago_hook	PF10427.9	1.5e-21	1	1
ENSCCAP00000025481	Ago_hook	PF10427.9	4.7e-21	1	1
ENSCCAP00000025545	RRM_1	PF00076.22	0.00031	1	1
ENSCCAP00000025481	RRM_1	PF00076.22	0.00032	1	1
ENSCCAP00000025502	RRM_1	PF00076.22	0.00032	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000043061	TNRC6C-204	5733	-	ENSCCAP00000025538	1910 (aa)	-	A0A2K5RBN6
ENSCCAT00000043069	TNRC6C-205	5070	-	ENSCCAP00000025545	1689 (aa)	-	A0A2K5RBM8
ENSCCAT00000043025	TNRC6C-202	8069	XM_017525014	ENSCCAP00000025502	1728 (aa)	XP_017380503	A0A2K5RBJ8
ENSCCAT00000043004	TNRC6C-201	7380	-	ENSCCAP00000025481	1725 (aa)	-	A0A2K5RBG1
ENSCCAT00000043049	TNRC6C-203	5832	XM_017525007	ENSCCAP00000025526	1943 (aa)	XP_017380496	A0A2K5RBK4

Gene Model

Click here to download ENSCCAG00000030524's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000030524's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000030524	TNRC6C	98	44.065	ENSCCAG00000033664	TNRC6A	97	49.926
ENSCCAG00000030524	TNRC6C	95	39.870	ENSCCAG00000019912	TNRC6B	88	53.012

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000030524	TNRC6C	100	98.494	ENSG00000078687	TNRC6C	100	100.000	Homo_sapiens
ENSCCAG00000030524	TNRC6C	80	54.292	ENSAPOG00000019749	tnrc6c1	98	49.839	Acanthochromis_polyacanthus
ENSCCAG00000030524	TNRC6C	100	89.645	ENSAMEG00000013756	TNRC6C	99	89.120	Ailuropoda_melanoleuca
ENSCCAG00000030524	TNRC6C	91	53.140	ENSACIG00000008075	tnrc6c1	98	55.432	Amphilophus_citrinellus
ENSCCAG00000030524	TNRC6C	77	68.960	ENSAOCG00000023968	tnrc6c1	99	50.052	Amphiprion_ocellaris
ENSCCAG00000030524	TNRC6C	80	54.354	ENSAPEG00000009020	tnrc6c1	99	49.948	Amphiprion_percula
ENSCCAG00000030524	TNRC6C	100	86.705	ENSAPLG00000005456	TNRC6C	100	86.164	Anas_platyrhynchos
ENSCCAG00000030524	TNRC6C	100	87.384	ENSACAG00000016198	TNRC6C	98	86.510	Anolis_carolinensis
ENSCCAG00000030524	TNRC6C	100	99.053	ENSANAG00000021554	TNRC6C	100	99.053	Aotus_nancymaae
ENSCCAG00000030524	TNRC6C	93	48.445	ENSACLG00000000424	tnrc6c1	99	48.713	Astatotilapia_calliptera
ENSCCAG00000030524	TNRC6C	100	87.832	ENSBTAG00000018658	TNRC6C	100	88.128	Bos_taurus
ENSCCAG00000030524	TNRC6C	100	98.993	ENSCJAG00000019431	TNRC6C	100	98.993	Callithrix_jacchus
ENSCCAG00000030524	TNRC6C	100	91.604	ENSCAFG00000005224	TNRC6C	99	91.103	Canis_familiaris
ENSCCAG00000030524	TNRC6C	100	91.239	ENSCAFG00020006661	TNRC6C	99	91.497	Canis_lupus_dingo
ENSCCAG00000030524	TNRC6C	100	87.515	ENSCHIG00000026004	TNRC6C	100	86.118	Capra_hircus
ENSCCAG00000030524	TNRC6C	100	95.884	ENSTSYG00000005403	TNRC6C	100	95.884	Carlito_syrichta
ENSCCAG00000030524	TNRC6C	100	84.882	ENSCAPG00000007307	TNRC6C	99	84.023	Cavia_aperea
ENSCCAG00000030524	TNRC6C	100	90.349	ENSCPOG00000000467	TNRC6C	100	88.390	Cavia_porcellus
ENSCCAG00000030524	TNRC6C	100	98.261	ENSCATG00000033135	TNRC6C	100	98.261	Cercocebus_atys
ENSCCAG00000030524	TNRC6C	100	93.073	ENSCLAG00000011139	TNRC6C	99	90.365	Chinchilla_lanigera
ENSCCAG00000030524	TNRC6C	100	98.319	ENSCSAG00000005167	TNRC6C	100	97.735	Chlorocebus_sabaeus
ENSCCAG00000030524	TNRC6C	75	92.051	ENSCHOG00000000088	TNRC6C	72	91.172	Choloepus_hoffmanni
ENSCCAG00000030524	TNRC6C	100	87.655	ENSCPBG00000027960	TNRC6C	100	87.655	Chrysemys_picta_bellii
ENSCCAG00000030524	TNRC6C	100	97.855	ENSCANG00000041771	TNRC6C	100	97.855	Colobus_angolensis_palliatus
ENSCCAG00000030524	TNRC6C	100	89.688	ENSCGRG00001022686	Tnrc6c	100	88.568	Cricetulus_griseus_chok1gshd
ENSCCAG00000030524	TNRC6C	100	90.112	ENSCGRG00000018041	Tnrc6c	100	88.568	Cricetulus_griseus_crigri
ENSCCAG00000030524	TNRC6C	80	52.818	ENSCSEG00000012744	tnrc6c1	98	47.861	Cynoglossus_semilaevis
ENSCCAG00000030524	TNRC6C	100	54.190	ENSDARG00000076847	tnrc6c1	99	54.252	Danio_rerio
ENSCCAG00000030524	TNRC6C	100	91.209	ENSDNOG00000003247	TNRC6C	99	89.085	Dasypus_novemcinctus
ENSCCAG00000030524	TNRC6C	100	86.051	ENSDORG00000004558	Tnrc6c	100	85.933	Dipodomys_ordii
ENSCCAG00000030524	TNRC6C	90	83.391	ENSETEG00000005527	TNRC6C	86	83.979	Echinops_telfairi
ENSCCAG00000030524	TNRC6C	100	91.361	ENSEASG00005004799	TNRC6C	100	91.420	Equus_asinus_asinus
ENSCCAG00000030524	TNRC6C	100	91.483	ENSECAG00000012486	TNRC6C	99	90.710	Equus_caballus
ENSCCAG00000030524	TNRC6C	96	91.682	ENSEEUG00000010008	TNRC6C	96	92.047	Erinaceus_europaeus
ENSCCAG00000030524	TNRC6C	100	89.368	ENSFCAG00000028358	TNRC6C	100	89.309	Felis_catus
ENSCCAG00000030524	TNRC6C	100	86.784	ENSFALG00000000848	TNRC6C	100	86.103	Ficedula_albicollis
ENSCCAG00000030524	TNRC6C	100	91.474	ENSFDAG00000010368	TNRC6C	100	89.736	Fukomys_damarensis
ENSCCAG00000030524	TNRC6C	89	70.675	ENSFHEG00000002936	tnrc6c1	99	48.924	Fundulus_heteroclitus
ENSCCAG00000030524	TNRC6C	100	88.760	ENSGALG00000001725	TNRC6C	100	88.284	Gallus_gallus
ENSCCAG00000030524	TNRC6C	100	48.895	ENSGAFG00000019019	tnrc6c1	100	48.899	Gambusia_affinis
ENSCCAG00000030524	TNRC6C	95	52.493	ENSGACG00000012320	tnrc6c1	99	47.177	Gasterosteus_aculeatus
ENSCCAG00000030524	TNRC6C	100	87.341	ENSGAGG00000022043	TNRC6C	99	87.045	Gopherus_agassizii
ENSCCAG00000030524	TNRC6C	100	97.737	ENSGGOG00000011304	TNRC6C	100	97.737	Gorilla_gorilla
ENSCCAG00000030524	TNRC6C	100	48.047	ENSHBUG00000010846	tnrc6c1	99	48.837	Haplochromis_burtoni
ENSCCAG00000030524	TNRC6C	100	92.777	ENSHGLG00000004809	TNRC6C	99	90.005	Heterocephalus_glaber_female
ENSCCAG00000030524	TNRC6C	100	91.750	ENSHGLG00100012597	TNRC6C	99	90.109	Heterocephalus_glaber_male
ENSCCAG00000030524	TNRC6C	99	50.516	ENSIPUG00000000818	tnrc6c1	98	51.404	Ictalurus_punctatus
ENSCCAG00000030524	TNRC6C	100	91.603	ENSSTOG00000009101	TNRC6C	100	89.188	Ictidomys_tridecemlineatus
ENSCCAG00000030524	TNRC6C	100	88.981	ENSJJAG00000017055	Tnrc6c	99	87.097	Jaculus_jaculus
ENSCCAG00000030524	TNRC6C	99	48.038	ENSKMAG00000021023	tnrc6c1	100	50.604	Kryptolebias_marmoratus
ENSCCAG00000030524	TNRC6C	100	75.484	ENSLACG00000015283	TNRC6C	100	74.082	Latimeria_chalumnae
ENSCCAG00000030524	TNRC6C	99	56.641	ENSLOCG00000013377	tnrc6c1	99	55.507	Lepisosteus_oculatus
ENSCCAG00000030524	TNRC6C	100	90.807	ENSLAFG00000011122	TNRC6C	99	89.115	Loxodonta_africana
ENSCCAG00000030524	TNRC6C	100	98.377	ENSMFAG00000043943	TNRC6C	100	98.377	Macaca_fascicularis
ENSCCAG00000030524	TNRC6C	100	98.377	ENSMMUG00000011924	TNRC6C	100	98.342	Macaca_mulatta
ENSCCAG00000030524	TNRC6C	100	98.283	ENSMNEG00000030405	TNRC6C	100	98.283	Macaca_nemestrina
ENSCCAG00000030524	TNRC6C	100	98.319	ENSMLEG00000033436	TNRC6C	100	98.319	Mandrillus_leucophaeus
ENSCCAG00000030524	TNRC6C	94	54.740	ENSMAMG00000023613	tnrc6c1	100	52.120	Mastacembelus_armatus
ENSCCAG00000030524	TNRC6C	97	50.529	ENSMZEG00005010920	tnrc6c1	99	48.713	Maylandia_zebra
ENSCCAG00000030524	TNRC6C	100	79.897	ENSMGAG00000003906	TNRC6C	100	80.300	Meleagris_gallopavo
ENSCCAG00000030524	TNRC6C	100	89.629	ENSMAUG00000021618	Tnrc6c	100	89.570	Mesocricetus_auratus
ENSCCAG00000030524	TNRC6C	100	94.261	ENSMICG00000003952	TNRC6C	100	94.145	Microcebus_murinus
ENSCCAG00000030524	TNRC6C	100	91.770	ENSMOCG00000015879	Tnrc6c	100	89.232	Microtus_ochrogaster
ENSCCAG00000030524	TNRC6C	93	55.724	ENSMMOG00000005203	tnrc6c1	100	50.678	Mola_mola
ENSCCAG00000030524	TNRC6C	100	87.176	ENSMODG00000001785	TNRC6C	99	85.231	Monodelphis_domestica
ENSCCAG00000030524	TNRC6C	100	91.356	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	88.839	Mus_caroli
ENSCCAG00000030524	TNRC6C	100	91.119	ENSMUSG00000025571	Tnrc6c	100	88.615	Mus_musculus
ENSCCAG00000030524	TNRC6C	100	91.060	MGP_PahariEiJ_G0018593	Tnrc6c	100	88.559	Mus_pahari
ENSCCAG00000030524	TNRC6C	100	91.178	MGP_SPRETEiJ_G0018309	Tnrc6c	100	88.671	Mus_spretus
ENSCCAG00000030524	TNRC6C	100	89.172	ENSMPUG00000013348	TNRC6C	98	88.762	Mustela_putorius_furo
ENSCCAG00000030524	TNRC6C	100	82.255	ENSMLUG00000014431	TNRC6C	98	81.893	Myotis_lucifugus
ENSCCAG00000030524	TNRC6C	100	90.866	ENSNGAG00000012203	Tnrc6c	99	89.219	Nannospalax_galili
ENSCCAG00000030524	TNRC6C	91	53.356	ENSNBRG00000005344	tnrc6c1	99	49.285	Neolamprologus_brichardi
ENSCCAG00000030524	TNRC6C	100	95.153	ENSNLEG00000000047	TNRC6C	99	94.840	Nomascus_leucogenys
ENSCCAG00000030524	TNRC6C	97	81.939	ENSMEUG00000005104	TNRC6C	99	90.104	Notamacropus_eugenii
ENSCCAG00000030524	TNRC6C	100	92.244	ENSODEG00000012499	TNRC6C	100	92.422	Octodon_degus
ENSCCAG00000030524	TNRC6C	94	51.007	ENSONIG00000002210	tnrc6c1	96	52.413	Oreochromis_niloticus
ENSCCAG00000030524	TNRC6C	99	63.705	ENSOANG00000009758	-	100	61.194	Ornithorhynchus_anatinus
ENSCCAG00000030524	TNRC6C	84	80.305	ENSOCUG00000006122	TNRC6C	95	78.078	Oryctolagus_cuniculus
ENSCCAG00000030524	TNRC6C	91	50.306	ENSORLG00000009837	tnrc6c1	100	67.286	Oryzias_latipes
ENSCCAG00000030524	TNRC6C	92	50.239	ENSORLG00020016510	tnrc6c1	100	49.533	Oryzias_latipes_hni
ENSCCAG00000030524	TNRC6C	72	45.320	ENSORLG00015000171	tnrc6c1	98	45.302	Oryzias_latipes_hsok
ENSCCAG00000030524	TNRC6C	92	50.868	ENSOMEG00000000357	tnrc6c1	99	48.852	Oryzias_melastigma
ENSCCAG00000030524	TNRC6C	100	93.101	ENSOGAG00000007197	TNRC6C	100	93.101	Otolemur_garnettii
ENSCCAG00000030524	TNRC6C	96	84.867	ENSOARG00000006041	TNRC6C	97	84.997	Ovis_aries
ENSCCAG00000030524	TNRC6C	100	98.377	ENSPPAG00000027160	TNRC6C	100	98.377	Pan_paniscus
ENSCCAG00000030524	TNRC6C	100	89.368	ENSPPRG00000018881	TNRC6C	100	89.309	Panthera_pardus
ENSCCAG00000030524	TNRC6C	90	86.463	ENSPTIG00000008791	TNRC6C	91	86.133	Panthera_tigris_altaica
ENSCCAG00000030524	TNRC6C	100	98.377	ENSPTRG00000009699	TNRC6C	100	98.377	Pan_troglodytes
ENSCCAG00000030524	TNRC6C	100	98.165	ENSPANG00000019994	TNRC6C	100	98.165	Papio_anubis
ENSCCAG00000030524	TNRC6C	96	52.493	ENSPKIG00000005428	tnrc6c1	100	51.356	Paramormyrops_kingsleyae
ENSCCAG00000030524	TNRC6C	100	86.280	ENSPSIG00000018069	TNRC6C	100	83.893	Pelodiscus_sinensis
ENSCCAG00000030524	TNRC6C	80	57.294	ENSPMGG00000022911	tnrc6c1	97	62.857	Periophthalmus_magnuspinnatus
ENSCCAG00000030524	TNRC6C	100	90.866	ENSPEMG00000009785	Tnrc6c	100	88.450	Peromyscus_maniculatus_bairdii
ENSCCAG00000030524	TNRC6C	58	86.462	ENSPCIG00000017421	-	99	86.317	Phascolarctos_cinereus
ENSCCAG00000030524	TNRC6C	100	48.599	ENSPFOG00000012560	tnrc6c1	97	58.798	Poecilia_formosa
ENSCCAG00000030524	TNRC6C	100	49.748	ENSPLAG00000021055	tnrc6c1	100	51.024	Poecilia_latipinna
ENSCCAG00000030524	TNRC6C	100	98.609	ENSPPYG00000008679	TNRC6C	99	98.199	Pongo_abelii
ENSCCAG00000030524	TNRC6C	93	92.417	ENSPCAG00000012510	TNRC6C	91	92.417	Procavia_capensis
ENSCCAG00000030524	TNRC6C	100	94.725	ENSPCOG00000021451	TNRC6C	100	94.725	Propithecus_coquereli
ENSCCAG00000030524	TNRC6C	96	88.983	ENSPVAG00000002008	TNRC6C	95	88.983	Pteropus_vampyrus
ENSCCAG00000030524	TNRC6C	100	47.884	ENSPNYG00000014477	tnrc6c1	99	49.035	Pundamilia_nyererei
ENSCCAG00000030524	TNRC6C	100	90.538	ENSRNOG00000022395	Tnrc6c	100	90.538	Rattus_norvegicus
ENSCCAG00000030524	TNRC6C	100	98.319	ENSRBIG00000027777	TNRC6C	100	98.319	Rhinopithecus_bieti
ENSCCAG00000030524	TNRC6C	100	98.377	ENSRROG00000042912	TNRC6C	100	98.377	Rhinopithecus_roxellana
ENSCCAG00000030524	TNRC6C	100	98.667	ENSSBOG00000023981	TNRC6C	100	98.667	Saimiri_boliviensis_boliviensis
ENSCCAG00000030524	TNRC6C	54	90.270	ENSSHAG00000018330	-	100	89.622	Sarcophilus_harrisii
ENSCCAG00000030524	TNRC6C	79	58.398	ENSSFOG00015006475	tnrc6c1	99	51.602	Scleropages_formosus
ENSCCAG00000030524	TNRC6C	75	57.935	ENSSFOG00015004735	-	99	61.257	Scleropages_formosus
ENSCCAG00000030524	TNRC6C	100	48.836	ENSSMAG00000012761	tnrc6c1	99	50.575	Scophthalmus_maximus
ENSCCAG00000030524	TNRC6C	100	50.514	ENSSDUG00000002366	tnrc6c1	99	50.376	Seriola_dumerili
ENSCCAG00000030524	TNRC6C	100	48.726	ENSSLDG00000025613	tnrc6c1	100	50.166	Seriola_lalandi_dorsalis
ENSCCAG00000030524	TNRC6C	91	89.224	ENSSARG00000006816	TNRC6C	91	88.235	Sorex_araneus
ENSCCAG00000030524	TNRC6C	85	84.698	ENSSPUG00000007341	TNRC6C	99	84.698	Sphenodon_punctatus
ENSCCAG00000030524	TNRC6C	79	53.645	ENSSPAG00000014977	tnrc6c1	97	49.684	Stegastes_partitus
ENSCCAG00000030524	TNRC6C	97	91.065	ENSSSCG00000034373	TNRC6C	100	88.149	Sus_scrofa
ENSCCAG00000030524	TNRC6C	100	88.232	ENSTGUG00000007733	TNRC6C	100	85.794	Taeniopygia_guttata
ENSCCAG00000030524	TNRC6C	86	52.764	ENSTRUG00000011685	tnrc6c1	100	50.168	Takifugu_rubripes
ENSCCAG00000030524	TNRC6C	88	52.834	ENSTNIG00000005273	tnrc6c1	100	61.128	Tetraodon_nigroviridis
ENSCCAG00000030524	TNRC6C	65	85.680	ENSTBEG00000005046	TNRC6C	100	82.762	Tupaia_belangeri
ENSCCAG00000030524	TNRC6C	100	91.070	ENSTTRG00000010828	TNRC6C	97	91.130	Tursiops_truncatus
ENSCCAG00000030524	TNRC6C	100	89.407	ENSUMAG00000013614	TNRC6C	99	89.704	Ursus_maritimus
ENSCCAG00000030524	TNRC6C	52	81.207	ENSVPAG00000006765	-	99	81.214	Vicugna_pacos
ENSCCAG00000030524	TNRC6C	100	91.898	ENSVVUG00000015268	TNRC6C	100	91.898	Vulpes_vulpes
ENSCCAG00000030524	TNRC6C	100	75.617	ENSXETG00000019470	tnrc6c	100	74.971	Xenopus_tropicalis
ENSCCAG00000030524	TNRC6C	100	49.685	ENSXMAG00000025971	tnrc6c1	100	48.871	Xiphophorus_maculatus