EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000030543 (Gene tree)
Gene ID: -
Gene Symbol: DDX50
Alias: GU2|GUB|MGC3199|RH-II/GuB
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 48219 bases
Position: chrKV389641.1:3329729-3377947
Accession: 17906
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000025541	GUCT	PF08152.12	1.6e-21	1	1
ENSCCAP00000025554	GUCT	PF08152.12	1.9e-21	1	1
ENSCCAP00000025541	ResIII	PF04851.15	3.2e-10	1	1
ENSCCAP00000025554	ResIII	PF04851.15	3.9e-10	1	1
ENSCCAP00000025541	DEAD	PF00270.29	1.8e-47	1	1
ENSCCAP00000025554	DEAD	PF00270.29	2e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000043078	DDX50-202	1986	-	ENSCCAP00000025554	662 (aa)	-	A0A2K5RBQ4
ENSCCAT00000043084	DDX50-203	150	-	ENSCCAP00000025560	49 (aa)	-	A0A2K5RBP5
ENSCCAT00000043064	DDX50-201	1830	-	ENSCCAP00000025541	609 (aa)	-	A0A2K5RBL8

Gene Model

Click here to download ENSCCAG00000030543's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000030543's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000030543	DDX50	54	31.398	ENSCCAG00000036268	-	90	31.398
ENSCCAG00000030543	DDX50	52	31.667	ENSCCAG00000020612	DDX42	50	31.667
ENSCCAG00000030543	DDX50	53	33.780	ENSCCAG00000024116	DDX17	76	33.131
ENSCCAG00000030543	DDX50	52	32.796	ENSCCAG00000023934	DDX3X	54	33.908
ENSCCAG00000030543	DDX50	53	35.171	ENSCCAG00000023595	-	66	34.646
ENSCCAG00000030543	DDX50	53	32.075	ENSCCAG00000037932	DDX5	62	30.959
ENSCCAG00000030543	DDX50	52	32.240	ENSCCAG00000036904	-	60	32.162
ENSCCAG00000030543	DDX50	53	34.795	ENSCCAG00000024171	-	56	34.795
ENSCCAG00000030543	DDX50	51	30.836	ENSCCAG00000021636	-	69	30.836
ENSCCAG00000030543	DDX50	53	31.099	ENSCCAG00000036144	EIF4A3	86	31.635
ENSCCAG00000030543	DDX50	55	33.858	ENSCCAG00000028725	DDX4	50	34.857
ENSCCAG00000030543	DDX50	53	34.795	ENSCCAG00000021534	-	56	34.795
ENSCCAG00000030543	DDX50	65	40.506	ENSCCAG00000025989	DDX31	52	40.506
ENSCCAG00000030543	DDX50	50	30.028	ENSCCAG00000023213	DDX52	56	30.028
ENSCCAG00000030543	DDX50	55	31.070	ENSCCAG00000025717	DDX47	80	31.070
ENSCCAG00000030543	DDX50	52	32.591	ENSCCAG00000036188	DDX41	57	32.591
ENSCCAG00000030543	DDX50	81	63.510	ENSCCAG00000026288	DDX21	94	67.847
ENSCCAG00000030543	DDX50	53	30.811	ENSCCAG00000018129	-	61	30.811

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000030543	DDX50	100	90.476	ENSG00000107625	DDX50	91	90.476	Homo_sapiens
ENSCCAG00000030543	DDX50	91	87.255	ENSAMEG00000017992	DDX50	83	87.084	Ailuropoda_melanoleuca
ENSCCAG00000030543	DDX50	90	72.920	ENSANAG00000017785	-	91	72.769	Aotus_nancymaae
ENSCCAG00000030543	DDX50	100	88.095	ENSBTAG00000033413	DDX50	80	96.774	Bos_taurus
ENSCCAG00000030543	DDX50	100	90.476	ENSCJAG00000018844	DDX50	91	90.476	Callithrix_jacchus
ENSCCAG00000030543	DDX50	91	87.647	ENSCAFG00000013776	DDX50	88	95.699	Canis_familiaris
ENSCCAG00000030543	DDX50	91	87.647	ENSCAFG00020025977	DDX50	83	87.476	Canis_lupus_dingo
ENSCCAG00000030543	DDX50	100	87.500	ENSCHIG00000000285	DDX50	83	86.863	Capra_hircus
ENSCCAG00000030543	DDX50	100	88.431	ENSTSYG00000004192	DDX50	91	88.431	Carlito_syrichta
ENSCCAG00000030543	DDX50	93	82.573	ENSCAPG00000007230	-	87	88.766	Cavia_aperea
ENSCCAG00000030543	DDX50	90	86.248	ENSCPOG00000002131	-	83	86.078	Cavia_porcellus
ENSCCAG00000030543	DDX50	99	90.476	ENSCATG00000032463	DDX50	91	90.476	Cercocebus_atys
ENSCCAG00000030543	DDX50	99	57.264	ENSCATG00000039259	-	89	58.000	Cercocebus_atys
ENSCCAG00000030543	DDX50	98	56.923	ENSCATG00000035153	-	95	57.122	Cercocebus_atys
ENSCCAG00000030543	DDX50	100	89.286	ENSCLAG00000012957	-	91	89.286	Chinchilla_lanigera
ENSCCAG00000030543	DDX50	96	59.913	ENSCLAG00000001938	-	91	59.649	Chinchilla_lanigera
ENSCCAG00000030543	DDX50	100	90.476	ENSCSAG00000007703	DDX50	91	90.476	Chlorocebus_sabaeus
ENSCCAG00000030543	DDX50	86	89.899	ENSCHOG00000000233	DDX50	87	89.899	Choloepus_hoffmanni
ENSCCAG00000030543	DDX50	97	58.055	ENSCANG00000028077	-	91	57.839	Colobus_angolensis_palliatus
ENSCCAG00000030543	DDX50	83	77.181	ENSCANG00000018820	-	76	83.333	Colobus_angolensis_palliatus
ENSCCAG00000030543	DDX50	90	82.796	ENSCANG00000036450	-	81	82.796	Colobus_angolensis_palliatus
ENSCCAG00000030543	DDX50	90	93.548	ENSCGRG00001020223	Ddx50	82	93.548	Cricetulus_griseus_chok1gshd
ENSCCAG00000030543	DDX50	90	94.444	ENSCGRG00000015884	Ddx50	82	93.548	Cricetulus_griseus_crigri
ENSCCAG00000030543	DDX50	75	85.855	ENSDNOG00000001675	DDX50	100	69.183	Dasypus_novemcinctus
ENSCCAG00000030543	DDX50	90	87.230	ENSDORG00000007310	Ddx50	83	87.059	Dipodomys_ordii
ENSCCAG00000030543	DDX50	78	92.019	ENSETEG00000014069	DDX50	80	92.019	Echinops_telfairi
ENSCCAG00000030543	DDX50	100	87.500	ENSEASG00005015595	DDX50	91	87.500	Equus_asinus_asinus
ENSCCAG00000030543	DDX50	100	87.647	ENSECAG00000023044	DDX50	91	87.647	Equus_caballus
ENSCCAG00000030543	DDX50	88	89.655	ENSEEUG00000005782	DDX50	81	89.655	Erinaceus_europaeus
ENSCCAG00000030543	DDX50	100	89.286	ENSFCAG00000012678	DDX50	91	89.286	Felis_catus
ENSCCAG00000030543	DDX50	90	78.515	ENSFDAG00000016109	-	91	78.515	Fukomys_damarensis
ENSCCAG00000030543	DDX50	100	90.476	ENSGGOG00000010100	DDX50	91	90.476	Gorilla_gorilla
ENSCCAG00000030543	DDX50	90	93.548	ENSHGLG00000013466	DDX50	82	93.548	Heterocephalus_glaber_female
ENSCCAG00000030543	DDX50	90	92.473	ENSHGLG00100006568	-	82	92.473	Heterocephalus_glaber_male
ENSCCAG00000030543	DDX50	90	93.548	ENSHGLG00100017191	DDX50	82	93.548	Heterocephalus_glaber_male
ENSCCAG00000030543	DDX50	100	87.671	ENSSTOG00000021852	-	91	87.671	Ictidomys_tridecemlineatus
ENSCCAG00000030543	DDX50	100	86.310	ENSJJAG00000023928	-	82	92.473	Jaculus_jaculus
ENSCCAG00000030543	DDX50	100	60.534	ENSJJAG00000019626	-	91	61.137	Jaculus_jaculus
ENSCCAG00000030543	DDX50	100	88.235	ENSLAFG00000006186	DDX50	91	88.235	Loxodonta_africana
ENSCCAG00000030543	DDX50	100	90.476	ENSMFAG00000044067	DDX50	91	90.476	Macaca_fascicularis
ENSCCAG00000030543	DDX50	97	61.328	ENSMFAG00000045339	-	95	61.328	Macaca_fascicularis
ENSCCAG00000030543	DDX50	92	55.625	ENSMMUG00000045343	-	90	55.486	Macaca_mulatta
ENSCCAG00000030543	DDX50	100	90.476	ENSMMUG00000001006	DDX50	91	90.476	Macaca_mulatta
ENSCCAG00000030543	DDX50	98	55.967	ENSMNEG00000045530	-	95	56.686	Macaca_nemestrina
ENSCCAG00000030543	DDX50	100	85.714	ENSMNEG00000031664	DDX50	100	85.714	Macaca_nemestrina
ENSCCAG00000030543	DDX50	100	73.634	ENSMLEG00000037313	DDX50	100	73.634	Mandrillus_leucophaeus
ENSCCAG00000030543	DDX50	81	74.843	ENSMLEG00000041988	-	89	73.684	Mandrillus_leucophaeus
ENSCCAG00000030543	DDX50	60	92.954	ENSMAUG00000022192	Ddx50	89	92.954	Mesocricetus_auratus
ENSCCAG00000030543	DDX50	100	87.500	ENSMICG00000017539	DDX50	91	87.500	Microcebus_murinus
ENSCCAG00000030543	DDX50	90	92.473	ENSMOCG00000001676	Ddx50	82	92.473	Microtus_ochrogaster
ENSCCAG00000030543	DDX50	90	70.874	ENSMODG00000010741	DDX50	92	63.478	Monodelphis_domestica
ENSCCAG00000030543	DDX50	90	91.398	MGP_CAROLIEiJ_G0015389	Ddx50	82	91.398	Mus_caroli
ENSCCAG00000030543	DDX50	90	92.473	ENSMUSG00000020076	Ddx50	82	92.473	Mus_musculus
ENSCCAG00000030543	DDX50	90	93.548	MGP_PahariEiJ_G0030805	Ddx50	82	93.548	Mus_pahari
ENSCCAG00000030543	DDX50	90	92.473	MGP_SPRETEiJ_G0016200	Ddx50	82	92.473	Mus_spretus
ENSCCAG00000030543	DDX50	85	86.471	ENSMPUG00000004589	DDX50	88	91.935	Mustela_putorius_furo
ENSCCAG00000030543	DDX50	90	90.110	ENSMLUG00000017590	DDX50	82	90.110	Myotis_lucifugus
ENSCCAG00000030543	DDX50	90	86.248	ENSNGAG00000004283	Ddx50	82	94.624	Nannospalax_galili
ENSCCAG00000030543	DDX50	100	90.476	ENSNLEG00000011631	DDX50	91	90.476	Nomascus_leucogenys
ENSCCAG00000030543	DDX50	98	55.783	ENSNLEG00000035506	-	94	55.919	Nomascus_leucogenys
ENSCCAG00000030543	DDX50	90	88.172	ENSOPRG00000001619	DDX50	82	88.172	Ochotona_princeps
ENSCCAG00000030543	DDX50	90	85.462	ENSODEG00000014597	-	83	85.882	Octodon_degus
ENSCCAG00000030543	DDX50	92	64.803	ENSOANG00000004776	DDX50	76	60.601	Ornithorhynchus_anatinus
ENSCCAG00000030543	DDX50	93	85.658	ENSOCUG00000002879	DDX50	84	92.473	Oryctolagus_cuniculus
ENSCCAG00000030543	DDX50	100	89.881	ENSOGAG00000001844	DDX50	91	89.881	Otolemur_garnettii
ENSCCAG00000030543	DDX50	100	87.230	ENSOARG00000005264	DDX50	83	87.059	Ovis_aries
ENSCCAG00000030543	DDX50	100	90.476	ENSPPAG00000040723	DDX50	91	90.476	Pan_paniscus
ENSCCAG00000030543	DDX50	100	89.286	ENSPPRG00000015826	DDX50	91	89.286	Panthera_pardus
ENSCCAG00000030543	DDX50	100	89.286	ENSPTIG00000008454	DDX50	91	89.286	Panthera_tigris_altaica
ENSCCAG00000030543	DDX50	100	90.476	ENSPTRG00000002562	DDX50	91	90.476	Pan_troglodytes
ENSCCAG00000030543	DDX50	90	85.321	ENSPANG00000022143	-	83	85.321	Papio_anubis
ENSCCAG00000030543	DDX50	90	85.265	ENSPEMG00000020899	-	82	89.247	Peromyscus_maniculatus_bairdii
ENSCCAG00000030543	DDX50	90	78.448	ENSPCIG00000016036	DDX50	81	78.280	Phascolarctos_cinereus
ENSCCAG00000030543	DDX50	89	90.476	ENSPPYG00000002390	DDX50	90	90.476	Pongo_abelii
ENSCCAG00000030543	DDX50	80	79.792	ENSPCAG00000009692	DDX50	89	79.792	Procavia_capensis
ENSCCAG00000030543	DDX50	75	96.970	ENSPCOG00000012574	DDX50	91	96.970	Propithecus_coquereli
ENSCCAG00000030543	DDX50	84	97.196	ENSPVAG00000009519	DDX50	70	97.196	Pteropus_vampyrus
ENSCCAG00000030543	DDX50	90	93.548	ENSRNOG00000000396	Ddx50	82	93.548	Rattus_norvegicus
ENSCCAG00000030543	DDX50	98	56.700	ENSRBIG00000036573	-	92	56.522	Rhinopithecus_bieti
ENSCCAG00000030543	DDX50	99	61.494	ENSRBIG00000039673	-	90	60.972	Rhinopithecus_bieti
ENSCCAG00000030543	DDX50	84	87.945	ENSRBIG00000042841	-	98	80.259	Rhinopithecus_bieti
ENSCCAG00000030543	DDX50	98	57.835	ENSRROG00000022853	-	91	56.765	Rhinopithecus_roxellana
ENSCCAG00000030543	DDX50	100	89.881	ENSRROG00000032158	DDX50	91	89.881	Rhinopithecus_roxellana
ENSCCAG00000030543	DDX50	90	88.298	ENSSBOG00000014441	DDX50	87	95.556	Saimiri_boliviensis_boliviensis
ENSCCAG00000030543	DDX50	86	71.690	ENSSHAG00000005690	DDX50	83	71.545	Sarcophilus_harrisii
ENSCCAG00000030543	DDX50	81	59.000	ENSSHAG00000005334	-	86	53.064	Sarcophilus_harrisii
ENSCCAG00000030543	DDX50	100	85.855	ENSSARG00000013553	DDX50	79	85.686	Sorex_araneus
ENSCCAG00000030543	DDX50	100	86.837	ENSSSCG00000010246	DDX50	83	86.667	Sus_scrofa
ENSCCAG00000030543	DDX50	85	94.444	ENSTBEG00000001085	DDX50	76	94.624	Tupaia_belangeri
ENSCCAG00000030543	DDX50	90	82.569	ENSTTRG00000012408	DDX50	87	82.569	Tursiops_truncatus
ENSCCAG00000030543	DDX50	91	87.647	ENSUAMG00000010976	DDX50	88	88.095	Ursus_americanus
ENSCCAG00000030543	DDX50	91	87.647	ENSUMAG00000007726	DDX50	83	87.476	Ursus_maritimus
ENSCCAG00000030543	DDX50	90	86.640	ENSVPAG00000000626	DDX50	83	86.471	Vicugna_pacos
ENSCCAG00000030543	DDX50	78	80.290	ENSVVUG00000020366	DDX50	83	88.690	Vulpes_vulpes