EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000030683 (Gene tree)
Gene ID: 108296111
Gene Symbol: -
Alias: -
Full Name: signal recognition particle 72
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 37826 bases
Position: chrKV390108.1:293566-331391
Accession: 108296111
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000025970	SRP72	PF08492.12	1.5e-22	1	1
ENSCCAP00000025995	SRP72	PF08492.12	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000043495	-	2010	XM_017518497	ENSCCAP00000025970	669 (aa)	XP_017373986	A0A2K5RCX0
ENSCCAT00000043520	-	678	-	ENSCCAP00000025995	225 (aa)	-	A0A2K5RCZ5

Gene Model

Click here to download ENSCCAG00000030683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000030683's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000030683	-	50	85.841	ENSCCAG00000031330	-	100	77.099
ENSCCAG00000030683	-	99	97.028	ENSCCAG00000030830	-	99	97.028

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000030683	-	95	97.492	ENSG00000174780	SRP72	95	97.492	Homo_sapiens
ENSCCAG00000030683	-	100	68.872	ENSAPOG00000019438	srp72	94	67.823	Acanthochromis_polyacanthus
ENSCCAG00000030683	-	95	96.865	ENSAMEG00000008469	SRP72	95	96.865	Ailuropoda_melanoleuca
ENSCCAG00000030683	-	94	76.498	ENSACIG00000000488	srp72	95	76.498	Amphilophus_citrinellus
ENSCCAG00000030683	-	93	77.796	ENSAOCG00000011256	srp72	95	77.516	Amphiprion_ocellaris
ENSCCAG00000030683	-	95	77.201	ENSAPEG00000001512	srp72	95	77.201	Amphiprion_percula
ENSCCAG00000030683	-	91	77.651	ENSATEG00000006781	srp72	99	77.651	Anabas_testudineus
ENSCCAG00000030683	-	92	84.304	ENSAPLG00000008751	SRP72	93	84.051	Anas_platyrhynchos
ENSCCAG00000030683	-	94	85.556	ENSACAG00000002381	SRP72	94	84.953	Anolis_carolinensis
ENSCCAG00000030683	-	100	99.107	ENSANAG00000020836	-	100	99.107	Aotus_nancymaae
ENSCCAG00000030683	-	94	77.215	ENSACLG00000014617	srp72	95	77.215	Astatotilapia_calliptera
ENSCCAG00000030683	-	94	77.795	ENSAMXG00000004011	srp72	95	77.795	Astyanax_mexicanus
ENSCCAG00000030683	-	95	96.082	ENSBTAG00000010593	SRP72	95	96.082	Bos_taurus
ENSCCAG00000030683	-	100	99.556	ENSCJAG00000017998	SRP72	100	99.556	Callithrix_jacchus
ENSCCAG00000030683	-	95	97.179	ENSCAFG00000002244	SRP72	95	97.179	Canis_familiaris
ENSCCAG00000030683	-	95	97.179	ENSCAFG00020027338	SRP72	93	97.455	Canis_lupus_dingo
ENSCCAG00000030683	-	94	93.819	ENSCHIG00000021465	SRP72	95	93.594	Capra_hircus
ENSCCAG00000030683	-	100	99.111	ENSTSYG00000010571	-	100	99.111	Carlito_syrichta
ENSCCAG00000030683	-	100	97.778	ENSCAPG00000016668	SRP72	100	97.778	Cavia_aperea
ENSCCAG00000030683	-	95	96.708	ENSCPOG00000000218	SRP72	95	96.708	Cavia_porcellus
ENSCCAG00000030683	-	95	97.335	ENSCATG00000008072	SRP72	95	97.335	Cercocebus_atys
ENSCCAG00000030683	-	97	75.151	ENSCATG00000045359	-	98	75.000	Cercocebus_atys
ENSCCAG00000030683	-	95	96.986	ENSCLAG00000003571	SRP72	95	96.238	Chinchilla_lanigera
ENSCCAG00000030683	-	95	91.223	ENSCSAG00000005079	SRP72	95	91.223	Chlorocebus_sabaeus
ENSCCAG00000030683	-	100	85.214	ENSCHOG00000013240	SRP72	85	93.220	Choloepus_hoffmanni
ENSCCAG00000030683	-	92	86.364	ENSCPBG00000015015	SRP72	95	84.977	Chrysemys_picta_bellii
ENSCCAG00000030683	-	93	41.358	ENSCING00000002417	-	93	42.130	Ciona_intestinalis
ENSCCAG00000030683	-	93	41.564	ENSCSAVG00000011288	-	93	41.796	Ciona_savignyi
ENSCCAG00000030683	-	95	97.335	ENSCANG00000041709	SRP72	95	97.335	Colobus_angolensis_palliatus
ENSCCAG00000030683	-	97	69.231	ENSCANG00000037920	-	94	67.504	Colobus_angolensis_palliatus
ENSCCAG00000030683	-	95	96.238	ENSCGRG00001013548	Srp72	95	96.238	Cricetulus_griseus_chok1gshd
ENSCCAG00000030683	-	89	96.007	ENSCGRG00000003013	Srp72	94	96.007	Cricetulus_griseus_crigri
ENSCCAG00000030683	-	94	77.883	ENSCSEG00000003616	srp72	95	78.006	Cynoglossus_semilaevis
ENSCCAG00000030683	-	91	77.467	ENSCVAG00000001520	srp72	99	77.467	Cyprinodon_variegatus
ENSCCAG00000030683	-	84	76.732	ENSDARG00000014139	srp72	95	76.732	Danio_rerio
ENSCCAG00000030683	-	95	90.625	ENSDNOG00000039012	SRP72	79	90.938	Dasypus_novemcinctus
ENSCCAG00000030683	-	93	95.860	ENSDORG00000000171	Srp72	95	95.447	Dipodomys_ordii
ENSCCAG00000030683	-	92	40.902	FBgn0038810	Srp72	94	40.902	Drosophila_melanogaster
ENSCCAG00000030683	-	93	95.534	ENSETEG00000005191	SRP72	95	95.462	Echinops_telfairi
ENSCCAG00000030683	-	91	51.867	ENSEBUG00000003696	srp72	92	62.917	Eptatretus_burgeri
ENSCCAG00000030683	-	95	96.552	ENSEASG00005017747	SRP72	95	96.552	Equus_asinus_asinus
ENSCCAG00000030683	-	95	96.395	ENSECAG00000006920	SRP72	95	96.395	Equus_caballus
ENSCCAG00000030683	-	95	75.430	ENSELUG00000022415	srp72	95	75.430	Esox_lucius
ENSCCAG00000030683	-	95	96.401	ENSFCAG00000027600	SRP72	95	96.401	Felis_catus
ENSCCAG00000030683	-	94	84.591	ENSFALG00000006713	SRP72	95	84.772	Ficedula_albicollis
ENSCCAG00000030683	-	94	59.649	ENSFDAG00000009793	-	97	57.500	Fukomys_damarensis
ENSCCAG00000030683	-	88	76.884	ENSFDAG00000012897	-	96	76.884	Fukomys_damarensis
ENSCCAG00000030683	-	95	95.768	ENSFDAG00000002014	-	95	95.768	Fukomys_damarensis
ENSCCAG00000030683	-	93	76.960	ENSFHEG00000017652	srp72	88	76.535	Fundulus_heteroclitus
ENSCCAG00000030683	-	93	72.800	ENSGMOG00000005986	srp72	94	72.698	Gadus_morhua
ENSCCAG00000030683	-	92	86.851	ENSGALG00000011403	SRP72	95	85.446	Gallus_gallus
ENSCCAG00000030683	-	94	77.567	ENSGAFG00000017762	srp72	94	77.567	Gambusia_affinis
ENSCCAG00000030683	-	93	76.198	ENSGACG00000016749	srp72	95	75.943	Gasterosteus_aculeatus
ENSCCAG00000030683	-	93	84.793	ENSGAGG00000024611	SRP72	93	85.765	Gopherus_agassizii
ENSCCAG00000030683	-	100	98.222	ENSGGOG00000013234	-	100	98.222	Gorilla_gorilla
ENSCCAG00000030683	-	94	77.373	ENSHBUG00000020723	srp72	95	77.373	Haplochromis_burtoni
ENSCCAG00000030683	-	83	90.393	ENSHGLG00000003950	-	94	90.393	Heterocephalus_glaber_female
ENSCCAG00000030683	-	95	96.238	ENSHGLG00000009791	SRP72	95	96.238	Heterocephalus_glaber_female
ENSCCAG00000030683	-	95	89.969	ENSHGLG00000005029	-	95	89.498	Heterocephalus_glaber_female
ENSCCAG00000030683	-	95	72.956	ENSHGLG00000018597	-	94	73.270	Heterocephalus_glaber_female
ENSCCAG00000030683	-	96	89.352	ENSHGLG00000010633	-	97	88.995	Heterocephalus_glaber_female
ENSCCAG00000030683	-	92	63.675	ENSHGLG00000003496	-	92	76.994	Heterocephalus_glaber_female
ENSCCAG00000030683	-	95	96.238	ENSHGLG00100009021	SRP72	95	96.238	Heterocephalus_glaber_male
ENSCCAG00000030683	-	91	72.964	ENSHGLG00100009346	-	95	84.466	Heterocephalus_glaber_male
ENSCCAG00000030683	-	83	89.956	ENSHGLG00100017133	-	94	89.956	Heterocephalus_glaber_male
ENSCCAG00000030683	-	60	74.545	ENSHGLG00100006071	-	100	79.323	Heterocephalus_glaber_male
ENSCCAG00000030683	-	95	89.969	ENSHGLG00100011236	-	95	89.498	Heterocephalus_glaber_male
ENSCCAG00000030683	-	96	76.012	ENSHCOG00000013760	srp72	96	76.012	Hippocampus_comes
ENSCCAG00000030683	-	94	77.057	ENSIPUG00000000210	srp72	95	77.057	Ictalurus_punctatus
ENSCCAG00000030683	-	95	97.022	ENSSTOG00000007305	SRP72	95	97.022	Ictidomys_tridecemlineatus
ENSCCAG00000030683	-	95	95.938	ENSJJAG00000018324	Srp72	95	95.938	Jaculus_jaculus
ENSCCAG00000030683	-	94	76.582	ENSKMAG00000003776	srp72	94	76.704	Kryptolebias_marmoratus
ENSCCAG00000030683	-	96	77.605	ENSLOCG00000002628	srp72	96	77.605	Lepisosteus_oculatus
ENSCCAG00000030683	-	95	96.082	ENSLAFG00000018307	SRP72	95	96.082	Loxodonta_africana
ENSCCAG00000030683	-	98	75.934	ENSMFAG00000037164	-	99	75.635	Macaca_fascicularis
ENSCCAG00000030683	-	95	97.179	ENSMFAG00000031065	SRP72	95	97.179	Macaca_fascicularis
ENSCCAG00000030683	-	94	74.167	ENSMMUG00000021262	-	98	68.750	Macaca_mulatta
ENSCCAG00000030683	-	99	94.494	ENSMMUG00000016368	SRP72	100	94.494	Macaca_mulatta
ENSCCAG00000030683	-	100	97.173	ENSMNEG00000038065	-	100	97.173	Macaca_nemestrina
ENSCCAG00000030683	-	100	95.833	ENSMLEG00000030140	-	100	95.833	Mandrillus_leucophaeus
ENSCCAG00000030683	-	95	76.535	ENSMAMG00000014989	srp72	84	76.535	Mastacembelus_armatus
ENSCCAG00000030683	-	94	77.373	ENSMZEG00005003325	srp72	95	77.373	Maylandia_zebra
ENSCCAG00000030683	-	88	82.293	ENSMGAG00000008567	SRP72	95	84.459	Meleagris_gallopavo
ENSCCAG00000030683	-	95	96.244	ENSMAUG00000001237	Srp72	95	96.244	Mesocricetus_auratus
ENSCCAG00000030683	-	99	95.231	ENSMICG00000008507	-	99	95.231	Microcebus_murinus
ENSCCAG00000030683	-	95	96.082	ENSMOCG00000020309	Srp72	95	96.082	Microtus_ochrogaster
ENSCCAG00000030683	-	93	75.762	ENSMMOG00000002627	srp72	95	75.475	Mola_mola
ENSCCAG00000030683	-	92	85.714	ENSMODG00000020697	SRP72	95	85.423	Monodelphis_domestica
ENSCCAG00000030683	-	100	75.546	ENSMALG00000003747	srp72	95	76.108	Monopterus_albus
ENSCCAG00000030683	-	94	95.866	MGP_CAROLIEiJ_G0027323	Srp72	95	95.604	Mus_caroli
ENSCCAG00000030683	-	94	95.866	ENSMUSG00000036323	Srp72	95	95.604	Mus_musculus
ENSCCAG00000030683	-	92	96.135	MGP_PahariEiJ_G0017103	Srp72	95	95.462	Mus_pahari
ENSCCAG00000030683	-	94	95.866	MGP_SPRETEiJ_G0028317	Srp72	95	95.604	Mus_spretus
ENSCCAG00000030683	-	95	96.238	ENSMPUG00000004828	SRP72	95	96.238	Mustela_putorius_furo
ENSCCAG00000030683	-	92	95.800	ENSMLUG00000007344	SRP72	95	95.298	Myotis_lucifugus
ENSCCAG00000030683	-	95	95.611	ENSNGAG00000012595	Srp72	95	95.611	Nannospalax_galili
ENSCCAG00000030683	-	95	73.312	ENSNBRG00000014492	srp72	94	73.892	Neolamprologus_brichardi
ENSCCAG00000030683	-	100	98.222	ENSNLEG00000008806	-	100	98.222	Nomascus_leucogenys
ENSCCAG00000030683	-	83	93.902	ENSMEUG00000005164	SRP72	85	92.208	Notamacropus_eugenii
ENSCCAG00000030683	-	93	94.249	ENSOPRG00000012521	SRP72	95	94.201	Ochotona_princeps
ENSCCAG00000030683	-	94	93.333	ENSODEG00000012214	SRP72	95	93.271	Octodon_degus
ENSCCAG00000030683	-	95	77.165	ENSONIG00000001446	srp72	94	77.165	Oreochromis_niloticus
ENSCCAG00000030683	-	95	68.576	ENSOANG00000008562	SRP72	94	69.876	Ornithorhynchus_anatinus
ENSCCAG00000030683	-	94	96.025	ENSOCUG00000012226	SRP72	95	95.925	Oryctolagus_cuniculus
ENSCCAG00000030683	-	91	76.020	ENSORLG00000020418	srp72	96	74.455	Oryzias_latipes
ENSCCAG00000030683	-	91	75.530	ENSORLG00020009138	srp72	95	72.897	Oryzias_latipes_hni
ENSCCAG00000030683	-	91	75.490	ENSORLG00015018251	srp72	96	73.832	Oryzias_latipes_hsok
ENSCCAG00000030683	-	93	75.563	ENSOMEG00000022008	srp72	95	75.000	Oryzias_melastigma
ENSCCAG00000030683	-	95	96.232	ENSOGAG00000003578	SRP72	95	96.232	Otolemur_garnettii
ENSCCAG00000030683	-	95	96.082	ENSOARG00000004329	SRP72	95	96.082	Ovis_aries
ENSCCAG00000030683	-	79	81.921	ENSPPAG00000032490	-	91	75.741	Pan_paniscus
ENSCCAG00000030683	-	100	98.222	ENSPPAG00000042265	SRP72	100	98.222	Pan_paniscus
ENSCCAG00000030683	-	100	68.613	ENSPPAG00000011428	-	99	69.298	Pan_paniscus
ENSCCAG00000030683	-	95	96.552	ENSPPRG00000015991	SRP72	95	96.552	Panthera_pardus
ENSCCAG00000030683	-	95	96.552	ENSPTIG00000018786	SRP72	95	96.552	Panthera_tigris_altaica
ENSCCAG00000030683	-	100	70.949	ENSPTRG00000048100	-	99	71.387	Pan_troglodytes
ENSCCAG00000030683	-	100	98.222	ENSPTRG00000048466	-	100	98.222	Pan_troglodytes
ENSCCAG00000030683	-	82	78.804	ENSPTRG00000043609	-	95	75.543	Pan_troglodytes
ENSCCAG00000030683	-	94	75.000	ENSPANG00000030230	-	94	77.176	Papio_anubis
ENSCCAG00000030683	-	95	97.335	ENSPANG00000005495	SRP72	95	97.335	Papio_anubis
ENSCCAG00000030683	-	90	85.832	ENSPSIG00000003003	SRP72	95	85.832	Pelodiscus_sinensis
ENSCCAG00000030683	-	95	95.164	ENSPEMG00000012828	-	95	95.164	Peromyscus_maniculatus_bairdii
ENSCCAG00000030683	-	90	59.804	ENSPMAG00000008885	-	92	59.330	Petromyzon_marinus
ENSCCAG00000030683	-	92	89.839	ENSPCIG00000000732	SRP72	94	89.325	Phascolarctos_cinereus
ENSCCAG00000030683	-	94	77.215	ENSPFOG00000003480	srp72	95	77.215	Poecilia_formosa
ENSCCAG00000030683	-	94	77.215	ENSPLAG00000020122	srp72	95	77.215	Poecilia_latipinna
ENSCCAG00000030683	-	100	72.222	ENSPMEG00000019988	srp72	95	76.899	Poecilia_mexicana
ENSCCAG00000030683	-	94	76.899	ENSPREG00000006218	srp72	95	76.899	Poecilia_reticulata
ENSCCAG00000030683	-	95	97.492	ENSPPYG00000014752	-	74	97.492	Pongo_abelii
ENSCCAG00000030683	-	100	74.615	ENSPPYG00000009152	-	91	79.396	Pongo_abelii
ENSCCAG00000030683	-	94	95.072	ENSPVAG00000005590	SRP72	95	94.984	Pteropus_vampyrus
ENSCCAG00000030683	-	94	77.690	ENSPNYG00000001916	srp72	95	77.690	Pundamilia_nyererei
ENSCCAG00000030683	-	94	77.165	ENSPNAG00000022424	srp72	95	77.165	Pygocentrus_nattereri
ENSCCAG00000030683	-	100	95.556	ENSRNOG00000002100	LOC108348180	93	95.694	Rattus_norvegicus
ENSCCAG00000030683	-	95	91.811	ENSRBIG00000042069	SRP72	95	91.811	Rhinopithecus_bieti
ENSCCAG00000030683	-	98	75.494	ENSRBIG00000029328	-	98	74.182	Rhinopithecus_bieti
ENSCCAG00000030683	-	95	97.335	ENSRROG00000035704	SRP72	95	97.335	Rhinopithecus_roxellana
ENSCCAG00000030683	-	64	71.264	ENSRROG00000042114	-	97	77.407	Rhinopithecus_roxellana
ENSCCAG00000030683	-	89	89.597	ENSSHAG00000000614	SRP72	95	85.959	Sarcophilus_harrisii
ENSCCAG00000030683	-	100	73.305	ENSSFOG00015002026	srp72	95	78.956	Scleropages_formosus
ENSCCAG00000030683	-	93	76.045	ENSSMAG00000007639	srp72	94	75.633	Scophthalmus_maximus
ENSCCAG00000030683	-	93	78.045	ENSSDUG00000007345	srp72	94	77.760	Seriola_dumerili
ENSCCAG00000030683	-	93	77.920	ENSSLDG00000021819	srp72	95	77.143	Seriola_lalandi_dorsalis
ENSCCAG00000030683	-	100	83.658	ENSSARG00000005804	SRP72	72	92.011	Sorex_araneus
ENSCCAG00000030683	-	93	86.741	ENSSPUG00000009740	SRP72	95	85.893	Sphenodon_punctatus
ENSCCAG00000030683	-	93	77.814	ENSSPAG00000011565	srp72	95	77.532	Stegastes_partitus
ENSCCAG00000030683	-	92	93.237	ENSSSCG00000008900	SRP72	95	92.645	Sus_scrofa
ENSCCAG00000030683	-	94	84.591	ENSTGUG00000004767	SRP72	95	84.483	Taeniopygia_guttata
ENSCCAG00000030683	-	96	74.611	ENSTRUG00000009831	srp72	96	74.611	Takifugu_rubripes
ENSCCAG00000030683	-	95	77.358	ENSTNIG00000013073	srp72	95	77.358	Tetraodon_nigroviridis
ENSCCAG00000030683	-	100	71.206	ENSTBEG00000007394	SRP72	85	83.051	Tupaia_belangeri
ENSCCAG00000030683	-	88	95.608	ENSTTRG00000010945	SRP72	95	95.341	Tursiops_truncatus
ENSCCAG00000030683	-	93	84.647	ENSUAMG00000001701	SRP72	91	97.802	Ursus_americanus
ENSCCAG00000030683	-	95	96.708	ENSUMAG00000008151	SRP72	95	96.708	Ursus_maritimus
ENSCCAG00000030683	-	94	94.595	ENSVPAG00000000458	SRP72	95	94.357	Vicugna_pacos
ENSCCAG00000030683	-	95	97.022	ENSVVUG00000006020	SRP72	95	97.022	Vulpes_vulpes
ENSCCAG00000030683	-	100	70.543	ENSXETG00000010205	srp72	95	78.182	Xenopus_tropicalis
ENSCCAG00000030683	-	100	73.778	ENSXCOG00000015488	srp72	91	74.020	Xiphophorus_couchianus
ENSCCAG00000030683	-	93	77.476	ENSXMAG00000018000	srp72	94	77.251	Xiphophorus_maculatus