EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000030849 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 4026 bases
Position: chrKV389477.1:4525832-4529857
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000026116	RBM1CTR	PF08081.11	4e-15	1	1
ENSCCAP00000026112	RBM1CTR	PF08081.11	4.6e-15	1	1
ENSCCAP00000026116	RRM_1	PF00076.22	1.4e-20	1	1
ENSCCAP00000026112	RRM_1	PF00076.22	1.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000043637	-	1269	-	ENSCCAP00000026112	422 (aa)	-	A0A2K5RDA0
ENSCCAT00000043641	-	1116	-	ENSCCAP00000026116	371 (aa)	-	A0A2K5RD98

Gene Model

Click here to download ENSCCAG00000030849's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000030849's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000030849	-	63	49.789	ENSCCAG00000005280	-	64	50.595
ENSCCAG00000030849	-	98	57.808	ENSCCAG00000037368	-	93	86.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000030849	-	98	88.430	ENSG00000170748	RBMXL2	95	85.638	Homo_sapiens
ENSCCAG00000030849	-	98	75.477	ENSBTAG00000047652	RBMXL2	94	77.309	Bos_taurus
ENSCCAG00000030849	-	98	86.538	ENSCJAG00000048010	-	95	84.533	Callithrix_jacchus
ENSCCAG00000030849	-	98	75.477	ENSCHIG00000005262	-	95	77.309	Capra_hircus
ENSCCAG00000030849	-	72	87.000	ENSCLAG00000016880	-	88	88.889	Chinchilla_lanigera
ENSCCAG00000030849	-	98	89.807	ENSCSAG00000019334	RBMXL2	95	88.298	Chlorocebus_sabaeus
ENSCCAG00000030849	-	97	84.530	ENSCSAG00000008478	-	95	82.759	Chlorocebus_sabaeus
ENSCCAG00000030849	-	97	76.099	ENSCGRG00001007681	Rbmxl2	95	73.740	Cricetulus_griseus_chok1gshd
ENSCCAG00000030849	-	98	66.033	ENSETEG00000005619	-	54	71.429	Echinops_telfairi
ENSCCAG00000030849	-	98	89.807	ENSGGOG00000006168	RBMXL2	95	86.968	Gorilla_gorilla
ENSCCAG00000030849	-	98	71.186	ENSMFAG00000017591	-	61	71.186	Macaca_fascicularis
ENSCCAG00000030849	-	98	89.256	ENSMFAG00000037874	RBMXL2	95	86.968	Macaca_fascicularis
ENSCCAG00000030849	-	98	91.185	ENSMMUG00000008588	RBMXL2	95	89.628	Macaca_mulatta
ENSCCAG00000030849	-	98	90.909	ENSMNEG00000004729	RBMXL2	95	89.362	Macaca_nemestrina
ENSCCAG00000030849	-	98	72.881	ENSMNEG00000026102	-	59	72.881	Macaca_nemestrina
ENSCCAG00000030849	-	97	60.773	ENSMAUG00000021353	Rbmxl2	93	94.000	Mesocricetus_auratus
ENSCCAG00000030849	-	97	78.297	MGP_CAROLIEiJ_G0030264	Rbmxl2	95	70.557	Mus_caroli
ENSCCAG00000030849	-	97	75.824	ENSMUSG00000073894	Rbmxl2	95	70.292	Mus_musculus
ENSCCAG00000030849	-	97	75.549	MGP_PahariEiJ_G0013481	Rbmxl2	95	70.027	Mus_pahari
ENSCCAG00000030849	-	97	75.824	MGP_SPRETEiJ_G0031377	Rbmxl2	95	70.292	Mus_spretus
ENSCCAG00000030849	-	70	89.655	ENSMPUG00000010430	-	91	89.655	Mustela_putorius_furo
ENSCCAG00000030849	-	98	87.879	ENSNLEG00000018176	RBMXL2	95	86.702	Nomascus_leucogenys
ENSCCAG00000030849	-	98	68.508	ENSOCUG00000021095	-	52	70.833	Oryctolagus_cuniculus
ENSCCAG00000030849	-	98	74.576	ENSPPAG00000030663	-	50	74.576	Pan_paniscus
ENSCCAG00000030849	-	98	88.705	ENSPTRG00000003312	RBMXL2	95	85.904	Pan_troglodytes
ENSCCAG00000030849	-	98	90.909	ENSPANG00000016324	RBMXL2	95	89.362	Papio_anubis
ENSCCAG00000030849	-	98	69.492	ENSPANG00000017967	-	61	69.492	Papio_anubis
ENSCCAG00000030849	-	98	80.992	ENSRBIG00000027863	RBMXL2	58	82.938	Rhinopithecus_bieti
ENSCCAG00000030849	-	54	80.000	ENSSARG00000012142	-	56	80.000	Sorex_araneus
ENSCCAG00000030849	-	78	83.478	ENSTTRG00000003238	-	76	90.217	Tursiops_truncatus