EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000030928 (Gene tree)
Gene ID: 108289530
Gene Symbol: -
Alias: -
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3A
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 5823 bases
Position: chrKV389830.1:1940152-1945974
Accession: 108289530
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000026252	APOBEC_N	PF08210.11	8.9e-47	1	1
ENSCCAP00000026252	APOBEC_C	PF05240.14	1.8e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000043778	-	1190	XM_017509036	ENSCCAP00000026252	206 (aa)	XP_017364525	A0A2K5RDN7

Gene Model

Click here to download ENSCCAG00000030928's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000030928's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000030928	-	92	38.947	ENSCCAG00000030932	-	83	38.947
ENSCCAG00000030928	-	73	45.098	ENSCCAG00000030398	AICDA	86	45.578
ENSCCAG00000030928	-	91	37.688	ENSCCAG00000008525	APOBEC3H	89	37.755
ENSCCAG00000030928	-	92	69.841	ENSCCAG00000027450	-	95	69.841
ENSCCAG00000030928	-	91	67.725	ENSCCAG00000032232	-	96	67.725
ENSCCAG00000030928	-	91	66.489	ENSCCAG00000033147	-	93	66.489
ENSCCAG00000030928	-	92	55.789	ENSCCAG00000032509	-	98	55.789

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000030928	-	92	62.963	ENSG00000239713	APOBEC3G	95	62.963	Homo_sapiens
ENSCCAG00000030928	-	95	47.525	ENSAMEG00000010815	-	88	46.919	Ailuropoda_melanoleuca
ENSCCAG00000030928	-	97	90.452	ENSANAG00000020573	-	100	90.452	Aotus_nancymaae
ENSCCAG00000030928	-	85	61.446	ENSANAG00000027961	-	98	61.446	Aotus_nancymaae
ENSCCAG00000030928	-	92	65.789	ENSANAG00000031271	APOBEC3G	97	65.789	Aotus_nancymaae
ENSCCAG00000030928	-	91	59.459	ENSANAG00000028416	-	97	59.459	Aotus_nancymaae
ENSCCAG00000030928	-	90	49.479	ENSBTAG00000037800	-	98	49.479	Bos_taurus
ENSCCAG00000030928	-	95	85.204	ENSCJAG00000011578	-	79	85.204	Callithrix_jacchus
ENSCCAG00000030928	-	91	64.894	ENSCJAG00000023368	APOBEC3G	97	64.894	Callithrix_jacchus
ENSCCAG00000030928	-	91	44.000	ENSCAFG00000015211	-	63	44.000	Canis_familiaris
ENSCCAG00000030928	-	61	52.800	ENSCAFG00000023589	-	89	52.800	Canis_familiaris
ENSCCAG00000030928	-	95	46.734	ENSCAFG00020002661	-	83	46.193	Canis_lupus_dingo
ENSCCAG00000030928	-	95	46.535	ENSCAFG00020002641	-	84	46.970	Canis_lupus_dingo
ENSCCAG00000030928	-	96	46.734	ENSCHIG00000012694	-	90	47.059	Capra_hircus
ENSCCAG00000030928	-	96	51.744	ENSCSAG00000006376	APOBEC3G	85	51.744	Chlorocebus_sabaeus
ENSCCAG00000030928	-	91	55.357	ENSCANG00000029968	-	74	55.357	Colobus_angolensis_palliatus
ENSCCAG00000030928	-	98	35.122	ENSDNOG00000039749	-	85	36.585	Dasypus_novemcinctus
ENSCCAG00000030928	-	96	55.000	ENSEASG00005018643	-	84	55.000	Equus_asinus_asinus
ENSCCAG00000030928	-	96	55.000	ENSECAG00000022371	APOBEC3Z1B	86	55.000	Equus_caballus
ENSCCAG00000030928	-	97	53.500	ENSECAG00000032756	-	68	53.500	Equus_caballus
ENSCCAG00000030928	-	91	59.777	ENSGGOG00000013750	APOBEC3G	95	59.777	Gorilla_gorilla
ENSCCAG00000030928	-	91	56.915	ENSLAFG00000020906	-	93	56.915	Loxodonta_africana
ENSCCAG00000030928	-	91	52.660	ENSLAFG00000008890	-	90	52.660	Loxodonta_africana
ENSCCAG00000030928	-	91	57.143	ENSLAFG00000005275	-	99	57.143	Loxodonta_africana
ENSCCAG00000030928	-	96	58.376	ENSMFAG00000044711	APOBEC3G	85	58.376	Macaca_fascicularis
ENSCCAG00000030928	-	96	58.081	ENSMMUG00000039346	APOBEC3G	94	58.081	Macaca_mulatta
ENSCCAG00000030928	-	96	58.376	ENSMNEG00000038847	APOBEC3G	94	58.081	Macaca_nemestrina
ENSCCAG00000030928	-	99	54.976	ENSMLEG00000024444	APOBEC3G	96	54.976	Mandrillus_leucophaeus
ENSCCAG00000030928	-	95	59.406	ENSMICG00000043748	-	99	59.406	Microcebus_murinus
ENSCCAG00000030928	-	90	57.297	ENSMICG00000047191	-	98	57.297	Microcebus_murinus
ENSCCAG00000030928	-	88	48.634	ENSMPUG00000013235	-	91	48.634	Mustela_putorius_furo
ENSCCAG00000030928	-	87	46.927	ENSMLUG00000000517	-	98	46.927	Myotis_lucifugus
ENSCCAG00000030928	-	94	48.705	ENSMLUG00000023022	-	86	48.705	Myotis_lucifugus
ENSCCAG00000030928	-	92	42.857	ENSMLUG00000028652	-	83	42.708	Myotis_lucifugus
ENSCCAG00000030928	-	91	46.907	ENSMLUG00000014565	-	100	46.907	Myotis_lucifugus
ENSCCAG00000030928	-	92	52.632	ENSMLUG00000024853	-	99	52.632	Myotis_lucifugus
ENSCCAG00000030928	-	91	59.375	ENSMLUG00000008631	-	97	59.375	Myotis_lucifugus
ENSCCAG00000030928	-	94	46.632	ENSMLUG00000024957	-	88	46.632	Myotis_lucifugus
ENSCCAG00000030928	-	53	50.909	ENSMLUG00000022226	-	82	50.450	Myotis_lucifugus
ENSCCAG00000030928	-	95	57.025	ENSMLUG00000026771	-	76	57.025	Myotis_lucifugus
ENSCCAG00000030928	-	94	48.936	ENSMLUG00000000977	-	97	48.936	Myotis_lucifugus
ENSCCAG00000030928	-	89	60.440	ENSNLEG00000018922	-	96	60.440	Nomascus_leucogenys
ENSCCAG00000030928	-	91	51.596	ENSOPRG00000002326	-	99	51.596	Ochotona_princeps
ENSCCAG00000030928	-	97	50.000	ENSOCUG00000023532	-	82	50.000	Oryctolagus_cuniculus
ENSCCAG00000030928	-	94	64.767	ENSOGAG00000032518	-	99	64.767	Otolemur_garnettii
ENSCCAG00000030928	-	95	63.184	ENSOGAG00000024822	-	98	63.184	Otolemur_garnettii
ENSCCAG00000030928	-	91	45.789	ENSOARG00000016213	APOBEC3Z1	99	45.789	Ovis_aries
ENSCCAG00000030928	-	90	63.784	ENSPPAG00000033277	-	76	63.784	Pan_paniscus
ENSCCAG00000030928	-	92	63.492	ENSPTRG00000014387	APOBEC3G	97	63.492	Pan_troglodytes
ENSCCAG00000030928	-	94	59.585	ENSPPYG00000011833	APOBEC3G	92	59.585	Pongo_abelii
ENSCCAG00000030928	-	92	53.439	ENSPCAG00000015518	-	77	53.439	Procavia_capensis
ENSCCAG00000030928	-	61	60.000	ENSPCAG00000001848	-	91	60.000	Procavia_capensis
ENSCCAG00000030928	-	90	55.026	ENSPCOG00000016357	-	91	55.026	Propithecus_coquereli
ENSCCAG00000030928	-	96	53.500	ENSPVAG00000004045	-	98	53.500	Pteropus_vampyrus
ENSCCAG00000030928	-	92	61.376	ENSRBIG00000035436	APOBEC3G	91	61.376	Rhinopithecus_bieti
ENSCCAG00000030928	-	90	68.280	ENSSBOG00000023468	-	77	68.280	Saimiri_boliviensis_boliviensis
ENSCCAG00000030928	-	91	59.043	ENSSBOG00000025673	-	90	59.043	Saimiri_boliviensis_boliviensis
ENSCCAG00000030928	-	100	91.262	ENSSBOG00000029091	-	100	91.262	Saimiri_boliviensis_boliviensis
ENSCCAG00000030928	-	92	64.737	ENSSBOG00000026566	-	97	64.737	Saimiri_boliviensis_boliviensis
ENSCCAG00000030928	-	94	69.681	ENSSBOG00000021384	-	98	69.681	Saimiri_boliviensis_boliviensis
ENSCCAG00000030928	-	92	72.632	ENSSBOG00000018208	-	99	72.632	Saimiri_boliviensis_boliviensis
ENSCCAG00000030928	-	93	51.031	ENSTTRG00000009395	-	95	51.031	Tursiops_truncatus
ENSCCAG00000030928	-	96	44.608	ENSUMAG00000014447	-	99	44.608	Ursus_maritimus
ENSCCAG00000030928	-	95	44.776	ENSUMAG00000002249	-	91	44.776	Ursus_maritimus