EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000030932 (Gene tree)
Gene ID: 108289451
Gene Symbol: -
Alias: -
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3C
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 4244 bases
Position: chrKV389830.1:1972536-1976779
Accession: 108289451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000026256	APOBEC_N	PF08210.11	3.3e-55	1	1
ENSCCAP00000026256	APOBEC_C	PF05240.14	3.6e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000043782	-	1881	XM_017508894	ENSCCAP00000026256	221 (aa)	XP_017364383	A0A2K5RDN6

Gene Model

Click here to download ENSCCAG00000030932's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000030932's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000030932	-	83	38.947	ENSCCAG00000030928	-	92	38.947
ENSCCAG00000030932	-	86	46.196	ENSCCAG00000033147	-	93	46.196
ENSCCAG00000030932	-	61	41.176	ENSCCAG00000030398	AICDA	83	41.176
ENSCCAG00000030932	-	89	43.478	ENSCCAG00000032509	-	98	43.478
ENSCCAG00000030932	-	79	33.333	ENSCCAG00000033987	APOBEC2	77	33.898
ENSCCAG00000030932	-	84	39.362	ENSCCAG00000032232	-	97	39.362
ENSCCAG00000030932	-	84	47.368	ENSCCAG00000027450	-	98	47.368
ENSCCAG00000030932	-	71	35.185	ENSCCAG00000008525	APOBEC3H	91	31.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000030932	-	90	63.000	ENSG00000243811	APOBEC3D	98	66.129	Homo_sapiens
ENSCCAG00000030932	-	84	67.742	ENSG00000244509	APOBEC3C	98	67.742	Homo_sapiens
ENSCCAG00000030932	-	90	67.000	ENSG00000128394	APOBEC3F	99	67.000	Homo_sapiens
ENSCCAG00000030932	-	84	87.097	ENSANAG00000030088	-	96	84.615	Aotus_nancymaae
ENSCCAG00000030932	-	60	88.636	ENSCJAG00000015317	-	100	88.636	Callithrix_jacchus
ENSCCAG00000030932	-	73	51.515	ENSCAFG00020002615	-	87	51.515	Canis_lupus_dingo
ENSCCAG00000030932	-	82	53.552	ENSTSYG00000028254	-	99	53.552	Carlito_syrichta
ENSCCAG00000030932	-	83	50.820	ENSTSYG00000030036	-	99	50.820	Carlito_syrichta
ENSCCAG00000030932	-	86	55.000	ENSTSYG00000034260	-	97	55.000	Carlito_syrichta
ENSCCAG00000030932	-	90	67.081	ENSCATG00000033502	-	100	64.706	Cercocebus_atys
ENSCCAG00000030932	-	84	64.516	ENSCATG00000043226	APOBEC3C	98	64.516	Cercocebus_atys
ENSCCAG00000030932	-	89	67.347	ENSCSAG00000006382	APOBEC3F	99	67.347	Chlorocebus_sabaeus
ENSCCAG00000030932	-	84	66.667	ENSCSAG00000006402	APOBEC3C	98	66.667	Chlorocebus_sabaeus
ENSCCAG00000030932	-	84	66.667	ENSCANG00000031957	-	99	66.667	Colobus_angolensis_palliatus
ENSCCAG00000030932	-	84	68.817	ENSCANG00000032904	-	99	68.817	Colobus_angolensis_palliatus
ENSCCAG00000030932	-	84	63.784	ENSCANG00000039177	APOBEC3C	97	63.784	Colobus_angolensis_palliatus
ENSCCAG00000030932	-	86	63.978	ENSCANG00000033269	-	100	63.978	Colobus_angolensis_palliatus
ENSCCAG00000030932	-	88	37.374	ENSDNOG00000044642	-	99	37.374	Dasypus_novemcinctus
ENSCCAG00000030932	-	86	44.500	ENSEASG00005018641	-	98	44.500	Equus_asinus_asinus
ENSCCAG00000030932	-	90	48.925	ENSECAG00000006071	-	100	47.938	Equus_caballus
ENSCCAG00000030932	-	88	68.041	ENSGGOG00000038678	APOBEC3F	99	66.500	Gorilla_gorilla
ENSCCAG00000030932	-	84	67.742	ENSGGOG00000036587	-	98	67.742	Gorilla_gorilla
ENSCCAG00000030932	-	90	44.385	ENSHGLG00000017315	-	85	44.086	Heterocephalus_glaber_female
ENSCCAG00000030932	-	90	44.385	ENSHGLG00100003105	-	93	44.385	Heterocephalus_glaber_male
ENSCCAG00000030932	-	84	63.441	ENSMFAG00000016792	APOBEC3C	98	63.441	Macaca_fascicularis
ENSCCAG00000030932	-	86	66.154	ENSMFAG00000002331	-	99	66.154	Macaca_fascicularis
ENSCCAG00000030932	-	90	65.000	ENSMFAG00000004037	APOBEC3F	99	65.000	Macaca_fascicularis
ENSCCAG00000030932	-	84	63.243	ENSMMUG00000004018	APOBEC3C	95	63.243	Macaca_mulatta
ENSCCAG00000030932	-	86	67.895	ENSMMUG00000004017	APOBEC3F	99	67.895	Macaca_mulatta
ENSCCAG00000030932	-	84	63.978	ENSMNEG00000045196	APOBEC3C	98	63.978	Macaca_nemestrina
ENSCCAG00000030932	-	86	66.842	ENSMNEG00000043316	APOBEC3D	99	66.842	Macaca_nemestrina
ENSCCAG00000030932	-	89	66.837	ENSMLEG00000029642	APOBEC3F	99	66.837	Mandrillus_leucophaeus
ENSCCAG00000030932	-	84	65.054	ENSMLEG00000036992	APOBEC3C	98	65.054	Mandrillus_leucophaeus
ENSCCAG00000030932	-	96	48.357	ENSMICG00000042615	-	98	48.357	Microcebus_murinus
ENSCCAG00000030932	-	83	50.265	ENSMLUG00000023676	-	99	50.265	Myotis_lucifugus
ENSCCAG00000030932	-	86	60.526	ENSNLEG00000035811	-	99	60.526	Nomascus_leucogenys
ENSCCAG00000030932	-	84	64.865	ENSNLEG00000028392	APOBEC3C	97	64.865	Nomascus_leucogenys
ENSCCAG00000030932	-	86	47.027	ENSOGAG00000030300	-	98	47.027	Otolemur_garnettii
ENSCCAG00000030932	-	86	46.369	ENSOGAG00000033404	-	100	46.369	Otolemur_garnettii
ENSCCAG00000030932	-	86	47.895	ENSOGAG00000032498	-	100	47.895	Otolemur_garnettii
ENSCCAG00000030932	-	90	60.500	ENSPPAG00000028218	-	98	63.441	Pan_paniscus
ENSCCAG00000030932	-	84	68.280	ENSPPAG00000014118	APOBEC3C	98	68.280	Pan_paniscus
ENSCCAG00000030932	-	85	48.677	ENSPPRG00000003726	-	99	48.677	Panthera_pardus
ENSCCAG00000030932	-	90	61.000	ENSPTRG00000041588	APOBEC3D	98	63.978	Pan_troglodytes
ENSCCAG00000030932	-	90	66.500	ENSPTRG00000014385	APOBEC3C	99	66.500	Pan_troglodytes
ENSCCAG00000030932	-	86	65.641	ENSPANG00000010775	APOBEC3F	100	65.641	Papio_anubis
ENSCCAG00000030932	-	84	66.667	ENSPPYG00000011832	APOBEC3C	98	66.667	Pongo_abelii
ENSCCAG00000030932	-	57	64.286	ENSPCOG00000018072	-	95	64.286	Propithecus_coquereli
ENSCCAG00000030932	-	57	60.800	ENSPCOG00000022067	-	95	60.800	Propithecus_coquereli
ENSCCAG00000030932	-	58	49.612	ENSPVAG00000009461	-	52	49.612	Pteropus_vampyrus
ENSCCAG00000030932	-	86	69.444	ENSRBIG00000042297	-	99	69.444	Rhinopithecus_bieti
ENSCCAG00000030932	-	84	67.742	ENSRBIG00000030323	-	100	67.742	Rhinopithecus_bieti
ENSCCAG00000030932	-	86	68.421	ENSRBIG00000030834	-	99	68.421	Rhinopithecus_bieti
ENSCCAG00000030932	-	86	68.421	ENSRROG00000028557	-	99	68.421	Rhinopithecus_roxellana
ENSCCAG00000030932	-	84	67.204	ENSRROG00000029045	APOBEC3C	98	67.204	Rhinopithecus_roxellana
ENSCCAG00000030932	-	86	69.444	ENSRROG00000029996	-	99	69.444	Rhinopithecus_roxellana
ENSCCAG00000030932	-	88	88.144	ENSSBOG00000032780	-	98	91.398	Saimiri_boliviensis_boliviensis
ENSCCAG00000030932	-	82	45.055	ENSUAMG00000004433	-	100	45.055	Ursus_americanus
ENSCCAG00000030932	-	84	45.405	ENSUMAG00000014441	-	86	45.405	Ursus_maritimus
ENSCCAG00000030932	-	66	51.678	ENSVVUG00000014628	-	91	51.370	Vulpes_vulpes