EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000031179 (Gene tree)
Gene ID: 108317926
Gene Symbol: -
Alias: -
Full Name: mitochondrial ribosomal protein L42
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 47683 bases
Position: chrKV389638.1:2812478-2860160
Accession: 108317926
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000026778	MRP-S32	PF10210.9	2.9e-40	1	1
ENSCCAP00000026788	MRP-S32	PF10210.9	1.4e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000044319	-	465	-	ENSCCAP00000026788	154 (aa)	-	A0A2K5RFA4
ENSCCAT00000044309	-	1856	XM_017548630	ENSCCAP00000026778	142 (aa)	XP_017404119	A0A2K5RF93

Gene Model

Click here to download ENSCCAG00000031179's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000031179's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000031179	-	98	72.368	ENSCCAG00000029290	-	93	72.368
ENSCCAG00000031179	-	100	82.911	ENSCCAG00000032203	-	95	82.911

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000031179	-	100	92.958	ENSG00000198015	MRPL42	100	92.969	Homo_sapiens
ENSCCAG00000031179	-	75	87.850	ENSAMEG00000009832	MRPL42	84	87.850	Ailuropoda_melanoleuca
ENSCCAG00000031179	-	68	63.542	ENSACIG00000017826	mrpl42	69	63.542	Amphilophus_citrinellus
ENSCCAG00000031179	-	97	64.748	ENSAPLG00000015057	MRPL42	97	64.748	Anas_platyrhynchos
ENSCCAG00000031179	-	90	92.969	ENSANAG00000000692	-	92	93.023	Aotus_nancymaae
ENSCCAG00000031179	-	98	80.263	ENSANAG00000033101	-	94	80.263	Aotus_nancymaae
ENSCCAG00000031179	-	100	71.831	ENSANAG00000036083	-	83	92.929	Aotus_nancymaae
ENSCCAG00000031179	-	100	94.366	ENSANAG00000036935	-	100	94.366	Aotus_nancymaae
ENSCCAG00000031179	-	100	84.507	ENSBTAG00000002708	MRPL42	100	85.938	Bos_taurus
ENSCCAG00000031179	-	75	73.585	ENSBTAG00000052971	-	97	73.585	Bos_taurus
ENSCCAG00000031179	-	100	97.887	ENSCJAG00000046971	MRPL42	100	97.887	Callithrix_jacchus
ENSCCAG00000031179	-	54	76.190	ENSCAFG00000030257	-	93	76.190	Canis_familiaris
ENSCCAG00000031179	-	68	86.598	ENSCAFG00020022967	-	85	86.598	Canis_lupus_dingo
ENSCCAG00000031179	-	51	87.671	ENSCAFG00020016271	-	97	87.671	Canis_lupus_dingo
ENSCCAG00000031179	-	90	87.500	ENSCHIG00000014921	MRPL42	100	87.500	Capra_hircus
ENSCCAG00000031179	-	66	86.170	ENSTSYG00000032810	-	86	86.170	Carlito_syrichta
ENSCCAG00000031179	-	100	87.324	ENSTSYG00000006370	-	100	87.324	Carlito_syrichta
ENSCCAG00000031179	-	92	83.206	ENSTSYG00000036466	-	92	82.090	Carlito_syrichta
ENSCCAG00000031179	-	84	83.193	ENSCAPG00000016985	-	89	83.193	Cavia_aperea
ENSCCAG00000031179	-	100	66.197	ENSCAPG00000015105	-	100	66.197	Cavia_aperea
ENSCCAG00000031179	-	100	66.901	ENSCPOG00000008943	-	100	66.901	Cavia_porcellus
ENSCCAG00000031179	-	96	82.353	ENSCPOG00000030015	-	98	81.560	Cavia_porcellus
ENSCCAG00000031179	-	100	90.141	ENSCATG00000037616	MRPL42	100	90.141	Cercocebus_atys
ENSCCAG00000031179	-	100	84.507	ENSCLAG00000005421	MRPL42	100	84.507	Chinchilla_lanigera
ENSCCAG00000031179	-	100	91.549	ENSCSAG00000003706	MRPL42	100	91.549	Chlorocebus_sabaeus
ENSCCAG00000031179	-	83	48.305	ENSCHOG00000007010	-	100	48.305	Choloepus_hoffmanni
ENSCCAG00000031179	-	100	65.541	ENSCPBG00000001581	MRPL42	100	65.541	Chrysemys_picta_bellii
ENSCCAG00000031179	-	100	91.549	ENSCANG00000033457	MRPL42	100	91.549	Colobus_angolensis_palliatus
ENSCCAG00000031179	-	99	65.000	ENSCGRG00001003813	-	99	65.000	Cricetulus_griseus_chok1gshd
ENSCCAG00000031179	-	100	76.056	ENSCGRG00001012694	-	99	76.056	Cricetulus_griseus_chok1gshd
ENSCCAG00000031179	-	99	77.143	ENSCGRG00000003801	Mrpl42	99	77.143	Cricetulus_griseus_crigri
ENSCCAG00000031179	-	100	78.873	ENSDNOG00000049701	-	100	78.873	Dasypus_novemcinctus
ENSCCAG00000031179	-	100	82.394	ENSDNOG00000032710	-	100	82.394	Dasypus_novemcinctus
ENSCCAG00000031179	-	99	85.000	ENSDORG00000015571	Mrpl42	99	85.000	Dipodomys_ordii
ENSCCAG00000031179	-	87	57.258	ENSETEG00000014745	-	92	57.258	Echinops_telfairi
ENSCCAG00000031179	-	100	88.028	ENSEASG00005019361	MRPL42	100	88.028	Equus_asinus_asinus
ENSCCAG00000031179	-	100	86.620	ENSECAG00000026888	MRPL42	100	86.620	Equus_caballus
ENSCCAG00000031179	-	89	68.504	ENSFCAG00000036356	-	85	65.185	Felis_catus
ENSCCAG00000031179	-	87	84.677	ENSFCAG00000040567	-	100	84.677	Felis_catus
ENSCCAG00000031179	-	100	87.324	ENSFCAG00000037907	-	100	87.324	Felis_catus
ENSCCAG00000031179	-	99	67.376	ENSFALG00000010717	MRPL42	95	67.376	Ficedula_albicollis
ENSCCAG00000031179	-	100	81.690	ENSFDAG00000018129	MRPL42	100	81.690	Fukomys_damarensis
ENSCCAG00000031179	-	87	69.919	ENSGALG00000011293	MRPL42	84	69.919	Gallus_gallus
ENSCCAG00000031179	-	100	66.216	ENSGAGG00000010125	MRPL42	100	66.216	Gopherus_agassizii
ENSCCAG00000031179	-	100	92.958	ENSGGOG00000022760	MRPL42	100	92.958	Gorilla_gorilla
ENSCCAG00000031179	-	87	84.553	ENSHGLG00000008248	-	100	84.553	Heterocephalus_glaber_female
ENSCCAG00000031179	-	86	86.885	ENSHGLG00000007399	-	93	86.508	Heterocephalus_glaber_female
ENSCCAG00000031179	-	89	85.714	ENSHGLG00100018317	-	89	85.714	Heterocephalus_glaber_male
ENSCCAG00000031179	-	85	84.298	ENSHGLG00100013257	-	98	84.298	Heterocephalus_glaber_male
ENSCCAG00000031179	-	100	82.394	ENSSTOG00000026544	MRPL42	100	82.394	Ictidomys_tridecemlineatus
ENSCCAG00000031179	-	87	67.480	ENSLACG00000006919	MRPL42	84	67.480	Latimeria_chalumnae
ENSCCAG00000031179	-	85	83.471	ENSLAFG00000013779	MRPL42	86	83.471	Loxodonta_africana
ENSCCAG00000031179	-	100	90.141	ENSMFAG00000032330	MRPL42	100	90.141	Macaca_fascicularis
ENSCCAG00000031179	-	100	89.032	ENSMMUG00000016805	MRPL42	100	89.032	Macaca_mulatta
ENSCCAG00000031179	-	100	90.141	ENSMNEG00000028853	MRPL42	100	90.141	Macaca_nemestrina
ENSCCAG00000031179	-	100	90.845	ENSMLEG00000038104	MRPL42	100	90.845	Mandrillus_leucophaeus
ENSCCAG00000031179	-	87	69.919	ENSMGAG00000011346	MRPL42	84	69.919	Meleagris_gallopavo
ENSCCAG00000031179	-	99	61.429	ENSMAUG00000018130	-	99	61.429	Mesocricetus_auratus
ENSCCAG00000031179	-	99	71.429	ENSMAUG00000010057	-	99	71.429	Mesocricetus_auratus
ENSCCAG00000031179	-	100	86.620	ENSMICG00000032596	-	100	86.620	Microcebus_murinus
ENSCCAG00000031179	-	98	79.605	ENSMICG00000036541	-	99	82.075	Microcebus_murinus
ENSCCAG00000031179	-	68	83.333	ENSMICG00000045594	-	97	83.333	Microcebus_murinus
ENSCCAG00000031179	-	68	84.375	ENSMICG00000028094	-	88	88.095	Microcebus_murinus
ENSCCAG00000031179	-	92	86.923	ENSMICG00000035189	-	100	78.808	Microcebus_murinus
ENSCCAG00000031179	-	99	74.286	ENSMOCG00000004616	-	99	74.286	Microtus_ochrogaster
ENSCCAG00000031179	-	99	78.571	ENSMOCG00000013541	-	99	78.571	Microtus_ochrogaster
ENSCCAG00000031179	-	99	75.887	MGP_CAROLIEiJ_G0015750	Mrpl42	99	75.887	Mus_caroli
ENSCCAG00000031179	-	99	75.177	ENSMUSG00000062981	Mrpl42	99	75.177	Mus_musculus
ENSCCAG00000031179	-	100	83.099	ENSMLUG00000029623	-	100	83.099	Myotis_lucifugus
ENSCCAG00000031179	-	99	82.857	ENSMLUG00000025058	-	99	82.857	Myotis_lucifugus
ENSCCAG00000031179	-	100	80.282	ENSMLUG00000023702	-	100	80.282	Myotis_lucifugus
ENSCCAG00000031179	-	90	85.938	ENSNGAG00000000717	Mrpl42	100	85.938	Nannospalax_galili
ENSCCAG00000031179	-	100	92.958	ENSNLEG00000005699	MRPL42	100	92.958	Nomascus_leucogenys
ENSCCAG00000031179	-	100	77.465	ENSOPRG00000010967	MRPL42	100	77.465	Ochotona_princeps
ENSCCAG00000031179	-	99	73.239	ENSODEG00000016452	-	99	74.648	Octodon_degus
ENSCCAG00000031179	-	100	75.524	ENSODEG00000012689	-	100	76.923	Octodon_degus
ENSCCAG00000031179	-	83	83.193	ENSODEG00000008681	-	100	83.193	Octodon_degus
ENSCCAG00000031179	-	100	83.803	ENSOCUG00000010928	MRPL42	100	83.803	Oryctolagus_cuniculus
ENSCCAG00000031179	-	100	77.465	ENSOGAG00000024156	-	100	77.465	Otolemur_garnettii
ENSCCAG00000031179	-	100	85.211	ENSOGAG00000025600	-	100	85.211	Otolemur_garnettii
ENSCCAG00000031179	-	100	78.169	ENSOGAG00000034004	-	100	78.169	Otolemur_garnettii
ENSCCAG00000031179	-	100	76.056	ENSOGAG00000026395	-	100	76.056	Otolemur_garnettii
ENSCCAG00000031179	-	99	77.305	ENSOGAG00000030438	-	100	77.305	Otolemur_garnettii
ENSCCAG00000031179	-	100	79.021	ENSOGAG00000027617	-	100	79.021	Otolemur_garnettii
ENSCCAG00000031179	-	100	83.803	ENSOGAG00000025686	-	100	83.803	Otolemur_garnettii
ENSCCAG00000031179	-	90	88.281	ENSOARG00000015849	MRPL42	100	88.281	Ovis_aries
ENSCCAG00000031179	-	100	91.549	ENSPPAG00000038254	MRPL42	100	91.549	Pan_paniscus
ENSCCAG00000031179	-	100	85.915	ENSPPRG00000015755	-	100	85.915	Panthera_pardus
ENSCCAG00000031179	-	100	58.442	ENSPPRG00000006533	-	98	58.442	Panthera_pardus
ENSCCAG00000031179	-	100	87.324	ENSPPRG00000013218	-	100	87.324	Panthera_pardus
ENSCCAG00000031179	-	87	84.677	ENSPPRG00000017935	-	100	84.677	Panthera_pardus
ENSCCAG00000031179	-	82	82.051	ENSPTIG00000009717	-	95	82.051	Panthera_tigris_altaica
ENSCCAG00000031179	-	100	87.324	ENSPTIG00000019099	-	100	87.324	Panthera_tigris_altaica
ENSCCAG00000031179	-	100	87.324	ENSPTIG00000009394	-	100	87.324	Panthera_tigris_altaica
ENSCCAG00000031179	-	100	91.549	ENSPTRG00000022791	MRPL42	100	91.549	Pan_troglodytes
ENSCCAG00000031179	-	100	79.487	ENSPANG00000030179	MRPL42	100	79.487	Papio_anubis
ENSCCAG00000031179	-	100	63.514	ENSPSIG00000010745	MRPL42	100	63.514	Pelodiscus_sinensis
ENSCCAG00000031179	-	99	77.857	ENSPEMG00000020562	-	99	77.857	Peromyscus_maniculatus_bairdii
ENSCCAG00000031179	-	100	64.865	ENSPCIG00000001472	-	77	64.865	Phascolarctos_cinereus
ENSCCAG00000031179	-	100	92.254	ENSPPYG00000004833	MRPL42	100	92.254	Pongo_abelii
ENSCCAG00000031179	-	83	85.593	ENSPCAG00000003791	MRPL42	100	85.593	Procavia_capensis
ENSCCAG00000031179	-	89	89.764	ENSPCOG00000014986	-	99	83.803	Propithecus_coquereli
ENSCCAG00000031179	-	100	76.761	ENSPCOG00000025008	-	100	76.761	Propithecus_coquereli
ENSCCAG00000031179	-	100	68.310	ENSPCOG00000018896	-	100	68.310	Propithecus_coquereli
ENSCCAG00000031179	-	58	67.073	ENSPVAG00000013736	-	69	67.073	Pteropus_vampyrus
ENSCCAG00000031179	-	98	71.429	ENSRNOG00000021867	AABR07009508.1	98	71.429	Rattus_norvegicus
ENSCCAG00000031179	-	99	76.429	ENSRNOG00000042740	Mrpl42	99	76.429	Rattus_norvegicus
ENSCCAG00000031179	-	100	71.613	ENSRBIG00000044361	-	100	71.613	Rhinopithecus_bieti
ENSCCAG00000031179	-	100	89.437	ENSRBIG00000011046	-	100	89.437	Rhinopithecus_bieti
ENSCCAG00000031179	-	100	90.141	ENSRROG00000033949	MRPL42	100	90.141	Rhinopithecus_roxellana
ENSCCAG00000031179	-	100	95.070	ENSSBOG00000009656	-	100	95.070	Saimiri_boliviensis_boliviensis
ENSCCAG00000031179	-	66	90.426	ENSSBOG00000027483	-	82	90.426	Saimiri_boliviensis_boliviensis
ENSCCAG00000031179	-	83	72.034	ENSSBOG00000025086	-	100	72.034	Saimiri_boliviensis_boliviensis
ENSCCAG00000031179	-	84	61.667	ENSSFOG00015006975	mrpl42	82	61.667	Scleropages_formosus
ENSCCAG00000031179	-	100	64.626	ENSSPUG00000015009	-	99	64.626	Sphenodon_punctatus
ENSCCAG00000031179	-	77	54.701	ENSSPAG00000013637	mrpl42	91	54.701	Stegastes_partitus
ENSCCAG00000031179	-	99	60.284	ENSSSCG00000036897	-	99	60.284	Sus_scrofa
ENSCCAG00000031179	-	100	87.324	ENSSSCG00000030478	-	100	87.324	Sus_scrofa
ENSCCAG00000031179	-	70	58.586	ENSSSCG00000034693	-	84	58.586	Sus_scrofa
ENSCCAG00000031179	-	61	77.907	ENSSSCG00000035613	-	88	70.707	Sus_scrofa
ENSCCAG00000031179	-	83	73.729	ENSTGUG00000008272	MRPL42	100	73.729	Taeniopygia_guttata
ENSCCAG00000031179	-	65	55.435	ENSTNIG00000018478	mrpl42	70	55.435	Tetraodon_nigroviridis
ENSCCAG00000031179	-	87	85.366	ENSTTRG00000003312	MRPL42	92	85.366	Tursiops_truncatus
ENSCCAG00000031179	-	57	77.778	ENSUAMG00000019831	-	85	77.778	Ursus_americanus
ENSCCAG00000031179	-	100	86.620	ENSUAMG00000025405	-	100	86.620	Ursus_americanus
ENSCCAG00000031179	-	91	71.538	ENSUMAG00000014643	-	81	71.538	Ursus_maritimus
ENSCCAG00000031179	-	100	86.620	ENSUMAG00000003107	-	100	88.372	Ursus_maritimus
ENSCCAG00000031179	-	83	86.441	ENSVPAG00000007658	MRPL42	100	86.441	Vicugna_pacos
ENSCCAG00000031179	-	54	86.842	ENSVVUG00000002834	-	94	86.842	Vulpes_vulpes
ENSCCAG00000031179	-	53	89.333	ENSVVUG00000007253	-	96	89.333	Vulpes_vulpes
ENSCCAG00000031179	-	100	84.507	ENSVVUG00000011842	-	100	84.507	Vulpes_vulpes
ENSCCAG00000031179	-	95	48.529	ENSXMAG00000004057	mrpl42	94	48.529	Xiphophorus_maculatus