EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000031641 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ribosomal L1 domain-containing protein 1 pseudogene
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 2729 bases
Position: chrKV389465.1:6721338-6724066
Accession: 108302178
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000027590	Ribosomal_L1	PF00687.21	1.3e-49	1	1
ENSCCAP00000027580	Ribosomal_L1	PF00687.21	1.4e-49	1	1
ENSCCAP00000027573	Ribosomal_L1	PF00687.21	1.4e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000045158	-	1425	-	ENSCCAP00000027573	474 (aa)	-	A0A2K5RHI4
ENSCCAT00000045177	-	1449	-	ENSCCAP00000027590	482 (aa)	-	A0A2K5RHI7
ENSCCAT00000045167	-	1437	-	ENSCCAP00000027580	478 (aa)	-	A0A2K5RHH3

Gene Model

Click here to download ENSCCAG00000031641's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000031641's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000031641	-	96	84.058	ENSCCAG00000017391	-	98	84.265
ENSCCAG00000031641	-	94	74.123	ENSCCAG00000025197	-	98	73.218

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000031641	-	95	80.042	ENSG00000171490	RSL1D1	100	87.342	Homo_sapiens
ENSCCAG00000031641	-	52	44.939	ENSAPOG00000004544	rsl1d1	91	39.503	Acanthochromis_polyacanthus
ENSCCAG00000031641	-	91	59.607	ENSAMEG00000009570	RSL1D1	98	61.396	Ailuropoda_melanoleuca
ENSCCAG00000031641	-	50	41.949	ENSACIG00000006608	rsl1d1	89	36.364	Amphilophus_citrinellus
ENSCCAG00000031641	-	52	45.344	ENSAOCG00000001548	rsl1d1	98	39.433	Amphiprion_ocellaris
ENSCCAG00000031641	-	52	45.344	ENSAPEG00000003334	rsl1d1	98	39.075	Amphiprion_percula
ENSCCAG00000031641	-	51	45.000	ENSATEG00000009247	rsl1d1	85	40.606	Anabas_testudineus
ENSCCAG00000031641	-	89	39.732	ENSAPLG00000004451	RSL1D1	100	39.821	Anas_platyrhynchos
ENSCCAG00000031641	-	96	85.381	ENSANAG00000028185	-	99	85.408	Aotus_nancymaae
ENSCCAG00000031641	-	96	81.328	ENSANAG00000026520	-	99	80.579	Aotus_nancymaae
ENSCCAG00000031641	-	96	86.335	ENSANAG00000034590	-	98	86.542	Aotus_nancymaae
ENSCCAG00000031641	-	70	41.515	ENSACLG00000017535	rsl1d1	92	40.793	Astatotilapia_calliptera
ENSCCAG00000031641	-	75	39.295	ENSAMXG00000008624	rsl1d1	89	38.375	Astyanax_mexicanus
ENSCCAG00000031641	-	97	59.138	ENSBTAG00000014588	RSL1D1	99	59.754	Bos_taurus
ENSCCAG00000031641	-	89	85.301	ENSCJAG00000042606	-	98	84.599	Callithrix_jacchus
ENSCCAG00000031641	-	89	85.078	ENSCJAG00000008375	-	98	84.599	Callithrix_jacchus
ENSCCAG00000031641	-	91	62.826	ENSCAFG00000018865	RSL1D1	98	61.983	Canis_familiaris
ENSCCAG00000031641	-	86	54.087	ENSCAFG00020002457	-	94	53.708	Canis_lupus_dingo
ENSCCAG00000031641	-	96	63.158	ENSCAFG00020024488	-	98	63.158	Canis_lupus_dingo
ENSCCAG00000031641	-	97	59.305	ENSCHIG00000018658	-	100	58.586	Capra_hircus
ENSCCAG00000031641	-	97	59.219	ENSCHIG00000009867	-	99	59.653	Capra_hircus
ENSCCAG00000031641	-	96	64.167	ENSTSYG00000009276	RSL1D1	98	64.167	Carlito_syrichta
ENSCCAG00000031641	-	97	57.606	ENSCPOG00000010630	RSL1D1	100	57.637	Cavia_porcellus
ENSCCAG00000031641	-	96	72.304	ENSCATG00000031153	RSL1D1	90	81.491	Cercocebus_atys
ENSCCAG00000031641	-	96	58.799	ENSCLAG00000010975	RSL1D1	98	59.420	Chinchilla_lanigera
ENSCCAG00000031641	-	95	78.316	ENSCSAG00000008255	RSL1D1	99	79.296	Chlorocebus_sabaeus
ENSCCAG00000031641	-	76	70.632	ENSCHOG00000010827	RSL1D1	76	70.632	Choloepus_hoffmanni
ENSCCAG00000031641	-	52	49.799	ENSCPBG00000004564	RSL1D1	94	50.237	Chrysemys_picta_bellii
ENSCCAG00000031641	-	95	77.895	ENSCANG00000029202	RSL1D1	98	79.956	Colobus_angolensis_palliatus
ENSCCAG00000031641	-	92	53.318	ENSCGRG00001014989	Rsl1d1	97	53.043	Cricetulus_griseus_chok1gshd
ENSCCAG00000031641	-	92	53.318	ENSCGRG00000001905	Rsl1d1	97	53.043	Cricetulus_griseus_crigri
ENSCCAG00000031641	-	70	37.685	ENSCSEG00000019693	rsl1d1	90	38.736	Cynoglossus_semilaevis
ENSCCAG00000031641	-	57	44.565	ENSCVAG00000000672	rsl1d1	83	40.896	Cyprinodon_variegatus
ENSCCAG00000031641	-	56	41.606	ENSDARG00000055868	rsl1d1	85	37.216	Danio_rerio
ENSCCAG00000031641	-	61	50.654	ENSDNOG00000047567	-	91	51.307	Dasypus_novemcinctus
ENSCCAG00000031641	-	96	58.163	ENSDNOG00000004601	-	98	57.755	Dasypus_novemcinctus
ENSCCAG00000031641	-	96	58.163	ENSDNOG00000040779	-	99	57.755	Dasypus_novemcinctus
ENSCCAG00000031641	-	94	49.888	ENSDORG00000013432	-	97	51.236	Dipodomys_ordii
ENSCCAG00000031641	-	57	38.351	ENSEBUG00000005400	-	67	38.351	Eptatretus_burgeri
ENSCCAG00000031641	-	92	64.468	ENSEASG00005011499	RSL1D1	99	64.170	Equus_asinus_asinus
ENSCCAG00000031641	-	92	63.830	ENSECAG00000025036	RSL1D1	99	63.765	Equus_caballus
ENSCCAG00000031641	-	70	78.495	ENSEEUG00000015569	-	79	78.495	Erinaceus_europaeus
ENSCCAG00000031641	-	78	39.024	ENSELUG00000019243	rsl1d1	97	39.130	Esox_lucius
ENSCCAG00000031641	-	97	61.507	ENSFCAG00000010114	RSL1D1	98	63.017	Felis_catus
ENSCCAG00000031641	-	90	38.412	ENSFALG00000003869	RSL1D1	93	37.609	Ficedula_albicollis
ENSCCAG00000031641	-	97	58.017	ENSFDAG00000011414	RSL1D1	99	58.650	Fukomys_damarensis
ENSCCAG00000031641	-	69	39.818	ENSFHEG00000017235	rsl1d1	81	38.602	Fundulus_heteroclitus
ENSCCAG00000031641	-	55	44.867	ENSGMOG00000013048	rsl1d1	92	44.867	Gadus_morhua
ENSCCAG00000031641	-	53	48.000	ENSGALG00000033690	RSL1D1	93	37.923	Gallus_gallus
ENSCCAG00000031641	-	51	42.917	ENSGAFG00000020794	rsl1d1	80	38.973	Gambusia_affinis
ENSCCAG00000031641	-	52	43.673	ENSGACG00000004483	rsl1d1	70	43.673	Gasterosteus_aculeatus
ENSCCAG00000031641	-	95	79.412	ENSGGOG00000013463	RSL1D1	99	79.959	Gorilla_gorilla
ENSCCAG00000031641	-	70	41.212	ENSHBUG00000001551	rsl1d1	91	40.510	Haplochromis_burtoni
ENSCCAG00000031641	-	97	59.149	ENSHGLG00000006774	RSL1D1	99	59.362	Heterocephalus_glaber_female
ENSCCAG00000031641	-	97	59.149	ENSHGLG00100017781	RSL1D1	99	59.362	Heterocephalus_glaber_male
ENSCCAG00000031641	-	51	41.393	ENSHCOG00000015208	rsl1d1	84	38.344	Hippocampus_comes
ENSCCAG00000031641	-	84	36.090	ENSIPUG00000001677	rsl1d1	97	36.118	Ictalurus_punctatus
ENSCCAG00000031641	-	83	56.808	ENSSTOG00000015400	RSL1D1	99	57.656	Ictidomys_tridecemlineatus
ENSCCAG00000031641	-	90	54.378	ENSJJAG00000012115	Rsl1d1	99	55.066	Jaculus_jaculus
ENSCCAG00000031641	-	51	45.041	ENSKMAG00000021908	rsl1d1	96	39.211	Kryptolebias_marmoratus
ENSCCAG00000031641	-	52	43.725	ENSLBEG00000001076	rsl1d1	96	36.939	Labrus_bergylta
ENSCCAG00000031641	-	91	37.209	ENSLOCG00000007416	rsl1d1	88	36.977	Lepisosteus_oculatus
ENSCCAG00000031641	-	91	57.778	ENSLAFG00000013664	RSL1D1	95	57.652	Loxodonta_africana
ENSCCAG00000031641	-	97	78.323	ENSMFAG00000037288	RSL1D1	99	80.124	Macaca_fascicularis
ENSCCAG00000031641	-	97	78.323	ENSMMUG00000019632	RSL1D1	99	88.535	Macaca_mulatta
ENSCCAG00000031641	-	97	78.119	ENSMNEG00000044196	RSL1D1	99	79.917	Macaca_nemestrina
ENSCCAG00000031641	-	97	78.484	ENSMLEG00000042058	RSL1D1	99	80.290	Mandrillus_leucophaeus
ENSCCAG00000031641	-	70	39.577	ENSMAMG00000004385	rsl1d1	97	39.211	Mastacembelus_armatus
ENSCCAG00000031641	-	60	41.901	ENSMZEG00005007150	rsl1d1	92	40.510	Maylandia_zebra
ENSCCAG00000031641	-	86	38.263	ENSMGAG00000000863	RSL1D1	96	37.946	Meleagris_gallopavo
ENSCCAG00000031641	-	97	63.278	ENSMICG00000008229	RSL1D1	99	64.315	Microcebus_murinus
ENSCCAG00000031641	-	87	53.957	ENSMOCG00000017724	Rsl1d1	98	54.419	Microtus_ochrogaster
ENSCCAG00000031641	-	51	42.975	ENSMMOG00000003730	rsl1d1	86	41.245	Mola_mola
ENSCCAG00000031641	-	89	43.404	ENSMODG00000004625	-	99	43.601	Monodelphis_domestica
ENSCCAG00000031641	-	76	44.262	ENSMODG00000029494	-	77	44.262	Monodelphis_domestica
ENSCCAG00000031641	-	50	45.607	ENSMALG00000009531	rsl1d1	85	40.882	Monopterus_albus
ENSCCAG00000031641	-	95	53.187	ENSMUSG00000005846	Rsl1d1	97	53.626	Mus_musculus
ENSCCAG00000031641	-	97	50.851	MGP_PahariEiJ_G0016164	Rsl1d1	99	51.064	Mus_pahari
ENSCCAG00000031641	-	95	52.967	MGP_SPRETEiJ_G0021352	Rsl1d1	97	53.407	Mus_spretus
ENSCCAG00000031641	-	92	61.407	ENSMPUG00000014548	RSL1D1	99	61.258	Mustela_putorius_furo
ENSCCAG00000031641	-	97	61.771	ENSMLUG00000000784	RSL1D1	99	61.992	Myotis_lucifugus
ENSCCAG00000031641	-	90	56.512	ENSNGAG00000013578	-	99	56.512	Nannospalax_galili
ENSCCAG00000031641	-	92	58.889	ENSNGAG00000009086	-	99	57.783	Nannospalax_galili
ENSCCAG00000031641	-	68	40.923	ENSNBRG00000002777	rsl1d1	85	40.606	Neolamprologus_brichardi
ENSCCAG00000031641	-	69	80.000	ENSNLEG00000012149	-	98	80.429	Nomascus_leucogenys
ENSCCAG00000031641	-	91	80.440	ENSNLEG00000010196	-	99	80.785	Nomascus_leucogenys
ENSCCAG00000031641	-	97	59.957	ENSOPRG00000004442	-	99	59.957	Ochotona_princeps
ENSCCAG00000031641	-	57	42.086	ENSONIG00000019757	rsl1d1	89	40.181	Oreochromis_niloticus
ENSCCAG00000031641	-	84	38.353	ENSOANG00000009408	-	99	38.149	Ornithorhynchus_anatinus
ENSCCAG00000031641	-	93	57.962	ENSOCUG00000004751	RSL1D1	99	58.799	Oryctolagus_cuniculus
ENSCCAG00000031641	-	50	43.220	ENSORLG00000002877	rsl1d1	84	38.623	Oryzias_latipes
ENSCCAG00000031641	-	70	38.323	ENSORLG00020006636	rsl1d1	84	38.323	Oryzias_latipes_hni
ENSCCAG00000031641	-	70	38.323	ENSORLG00015005427	rsl1d1	84	38.323	Oryzias_latipes_hsok
ENSCCAG00000031641	-	50	44.915	ENSOMEG00000008036	rsl1d1	95	35.677	Oryzias_melastigma
ENSCCAG00000031641	-	97	67.635	ENSOGAG00000015151	RSL1D1	100	67.010	Otolemur_garnettii
ENSCCAG00000031641	-	97	58.896	ENSOARG00000006923	RSL1D1	99	59.343	Ovis_aries
ENSCCAG00000031641	-	95	79.622	ENSPPAG00000039716	RSL1D1	99	80.165	Pan_paniscus
ENSCCAG00000031641	-	92	62.099	ENSPPRG00000005220	RSL1D1	98	63.017	Panthera_pardus
ENSCCAG00000031641	-	89	64.626	ENSPTIG00000005526	RSL1D1	94	63.616	Panthera_tigris_altaica
ENSCCAG00000031641	-	95	79.412	ENSPTRG00000007777	RSL1D1	99	79.959	Pan_troglodytes
ENSCCAG00000031641	-	92	78.158	ENSPANG00000023073	RSL1D1	99	79.917	Papio_anubis
ENSCCAG00000031641	-	58	41.516	ENSPKIG00000022687	rsl1d1	89	35.620	Paramormyrops_kingsleyae
ENSCCAG00000031641	-	81	40.102	ENSPSIG00000011642	RSL1D1	97	41.216	Pelodiscus_sinensis
ENSCCAG00000031641	-	52	44.898	ENSPMGG00000022261	rsl1d1	98	40.491	Periophthalmus_magnuspinnatus
ENSCCAG00000031641	-	93	51.860	ENSPEMG00000009523	Rsl1d1	96	53.173	Peromyscus_maniculatus_bairdii
ENSCCAG00000031641	-	80	34.550	ENSPMAG00000005446	rsl1d1	87	36.496	Petromyzon_marinus
ENSCCAG00000031641	-	78	46.774	ENSPCIG00000026851	-	87	48.108	Phascolarctos_cinereus
ENSCCAG00000031641	-	68	38.824	ENSPFOG00000005017	rsl1d1	92	38.824	Poecilia_formosa
ENSCCAG00000031641	-	77	37.302	ENSPLAG00000000482	rsl1d1	72	39.091	Poecilia_latipinna
ENSCCAG00000031641	-	55	42.146	ENSPMEG00000007032	rsl1d1	85	37.892	Poecilia_mexicana
ENSCCAG00000031641	-	50	44.915	ENSPREG00000016619	rsl1d1	81	38.261	Poecilia_reticulata
ENSCCAG00000031641	-	93	66.889	ENSPPYG00000019335	-	97	67.686	Pongo_abelii
ENSCCAG00000031641	-	91	79.258	ENSPPYG00000007112	RSL1D1	99	80.412	Pongo_abelii
ENSCCAG00000031641	-	79	65.152	ENSPCAG00000011264	-	83	65.152	Procavia_capensis
ENSCCAG00000031641	-	77	62.663	ENSPCOG00000022456	RSL1D1	100	62.924	Propithecus_coquereli
ENSCCAG00000031641	-	97	60.494	ENSPVAG00000005014	RSL1D1	99	61.284	Pteropus_vampyrus
ENSCCAG00000031641	-	60	41.549	ENSPNYG00000002850	rsl1d1	91	40.227	Pundamilia_nyererei
ENSCCAG00000031641	-	74	38.352	ENSPNAG00000011848	rsl1d1	95	37.696	Pygocentrus_nattereri
ENSCCAG00000031641	-	93	53.084	ENSRNOG00000048608	Rsl1d1l1	99	53.518	Rattus_norvegicus
ENSCCAG00000031641	-	77	46.703	ENSRNOG00000032439	Rsl1d1	58	46.978	Rattus_norvegicus
ENSCCAG00000031641	-	93	53.084	ENSRNOG00000061236	LOC108348298	99	53.518	Rattus_norvegicus
ENSCCAG00000031641	-	95	78.105	ENSRBIG00000030317	RSL1D1	99	79.089	Rhinopithecus_bieti
ENSCCAG00000031641	-	95	78.105	ENSRROG00000033658	RSL1D1	99	79.089	Rhinopithecus_roxellana
ENSCCAG00000031641	-	97	67.423	ENSSBOG00000029329	-	98	67.629	Saimiri_boliviensis_boliviensis
ENSCCAG00000031641	-	95	85.535	ENSSBOG00000035910	-	98	85.300	Saimiri_boliviensis_boliviensis
ENSCCAG00000031641	-	95	79.289	ENSSBOG00000028384	-	98	78.926	Saimiri_boliviensis_boliviensis
ENSCCAG00000031641	-	65	43.533	ENSSFOG00015011354	rsl1d1	91	43.533	Scleropages_formosus
ENSCCAG00000031641	-	67	37.188	ENSSMAG00000007957	rsl1d1	94	36.364	Scophthalmus_maximus
ENSCCAG00000031641	-	51	44.583	ENSSDUG00000008447	rsl1d1	78	40.303	Seriola_dumerili
ENSCCAG00000031641	-	51	44.398	ENSSLDG00000008293	rsl1d1	98	39.433	Seriola_lalandi_dorsalis
ENSCCAG00000031641	-	91	40.000	ENSSPUG00000007525	RSL1D1	98	40.044	Sphenodon_punctatus
ENSCCAG00000031641	-	51	46.250	ENSSPAG00000009755	rsl1d1	98	39.744	Stegastes_partitus
ENSCCAG00000031641	-	91	58.244	ENSSSCG00000023984	RSL1D1	99	59.184	Sus_scrofa
ENSCCAG00000031641	-	52	49.388	ENSTGUG00000005174	RSL1D1	99	49.388	Taeniopygia_guttata
ENSCCAG00000031641	-	70	40.653	ENSTRUG00000016970	rsl1d1	92	39.130	Takifugu_rubripes
ENSCCAG00000031641	-	51	43.621	ENSTNIG00000012925	rsl1d1	98	38.168	Tetraodon_nigroviridis
ENSCCAG00000031641	-	80	54.433	ENSTBEG00000014678	RSL1D1	99	54.634	Tupaia_belangeri
ENSCCAG00000031641	-	91	58.462	ENSTTRG00000011629	RSL1D1	99	58.678	Tursiops_truncatus
ENSCCAG00000031641	-	91	61.290	ENSUAMG00000004470	RSL1D1	99	61.602	Ursus_americanus
ENSCCAG00000031641	-	83	55.702	ENSUMAG00000003994	RSL1D1	99	56.858	Ursus_maritimus
ENSCCAG00000031641	-	91	54.279	ENSVVUG00000024962	-	95	54.741	Vulpes_vulpes
ENSCCAG00000031641	-	91	62.391	ENSVVUG00000018170	-	98	62.190	Vulpes_vulpes
ENSCCAG00000031641	-	89	42.105	ENSXETG00000033365	-	94	42.237	Xenopus_tropicalis
ENSCCAG00000031641	-	54	42.126	ENSXMAG00000025111	rsl1d1	73	42.126	Xiphophorus_maculatus