EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000031681 (Gene tree)
Gene ID: 108310571
Gene Symbol: PABPC4L
Alias: -
Full Name: poly(A) binding protein cytoplasmic 4 like
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 1287 bases
Position: chrKV389531.1:17623-18909
Accession: 108310571
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000027630	RRM_5	PF13893.6	2.5e-14	1	3
ENSCCAP00000027630	RRM_5	PF13893.6	2.5e-14	2	3
ENSCCAP00000027630	RRM_5	PF13893.6	2.5e-14	3	3
ENSCCAP00000027630	RRM_1	PF00076.22	6e-85	1	4
ENSCCAP00000027630	RRM_1	PF00076.22	6e-85	2	4
ENSCCAP00000027630	RRM_1	PF00076.22	6e-85	3	4
ENSCCAP00000027630	RRM_1	PF00076.22	6e-85	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000045220	PABPC4L-201	1287	XM_017537643	ENSCCAP00000027630	428 (aa)	XP_017393132	A0A2K5RHM7

Gene Model

Click here to download ENSCCAG00000031681's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000031681's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000031681	PABPC4L	75	31.707	ENSCCAG00000025328	ELAVL1	82	31.707
ENSCCAG00000031681	PABPC4L	87	73.784	ENSCCAG00000037306	PABPC4	62	73.784
ENSCCAG00000031681	PABPC4L	74	40.789	ENSCCAG00000038019	-	89	44.000
ENSCCAG00000031681	PABPC4L	87	71.351	ENSCCAG00000037733	-	70	71.351
ENSCCAG00000031681	PABPC4L	84	57.500	ENSCCAG00000028512	-	83	57.500
ENSCCAG00000031681	PABPC4L	88	66.563	ENSCCAG00000031444	-	66	66.563
ENSCCAG00000031681	PABPC4L	89	62.534	ENSCCAG00000023338	PABPC1L	63	62.534
ENSCCAG00000031681	PABPC4L	84	41.530	ENSCCAG00000021751	-	52	41.530
ENSCCAG00000031681	PABPC4L	83	36.111	ENSCCAG00000031689	-	70	36.111
ENSCCAG00000031681	PABPC4L	86	53.930	ENSCCAG00000027395	-	55	53.930
ENSCCAG00000031681	PABPC4L	85	62.755	ENSCCAG00000031524	-	98	62.755
ENSCCAG00000031681	PABPC4L	85	34.074	ENSCCAG00000000551	-	53	33.824
ENSCCAG00000031681	PABPC4L	84	60.955	ENSCCAG00000032154	PABPC5	99	59.733
ENSCCAG00000031681	PABPC4L	87	66.205	ENSCCAG00000031750	-	66	66.205
ENSCCAG00000031681	PABPC4L	87	69.146	ENSCCAG00000037208	PABPC3	59	69.146
ENSCCAG00000031681	PABPC4L	84	32.927	ENSCCAG00000037506	TRNAU1AP	86	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000031681	PABPC4L	86	97.297	ENSG00000254535	PABPC4L	100	97.297	Homo_sapiens
ENSCCAG00000031681	PABPC4L	100	98.364	ENSANAG00000017199	PABPC4L	100	98.364	Aotus_nancymaae
ENSCCAG00000031681	PABPC4L	86	87.805	ENSBTAG00000046902	PABPC4L	99	87.805	Bos_taurus
ENSCCAG00000031681	PABPC4L	100	97.897	ENSCJAG00000045332	PABPC4L	100	97.897	Callithrix_jacchus
ENSCCAG00000031681	PABPC4L	89	73.370	ENSCAFG00020019182	-	54	73.370	Canis_lupus_dingo
ENSCCAG00000031681	PABPC4L	86	87.805	ENSCHIG00000007231	PABPC4L	99	87.805	Capra_hircus
ENSCCAG00000031681	PABPC4L	85	79.701	ENSCAPG00000000555	PABPC4L	100	79.701	Cavia_aperea
ENSCCAG00000031681	PABPC4L	86	77.027	ENSCPOG00000033167	PABPC4L	100	77.027	Cavia_porcellus
ENSCCAG00000031681	PABPC4L	86	82.432	ENSCLAG00000017628	PABPC4L	100	82.432	Chinchilla_lanigera
ENSCCAG00000031681	PABPC4L	86	94.865	ENSCANG00000037677	PABPC4L	100	94.865	Colobus_angolensis_palliatus
ENSCCAG00000031681	PABPC4L	86	82.432	ENSCGRG00001002070	Pabpc4l	100	82.432	Cricetulus_griseus_chok1gshd
ENSCCAG00000031681	PABPC4L	86	82.432	ENSCGRG00000020086	Pabpc4l	100	82.432	Cricetulus_griseus_crigri
ENSCCAG00000031681	PABPC4L	91	88.402	ENSDNOG00000031077	PABPC4L	100	88.402	Dasypus_novemcinctus
ENSCCAG00000031681	PABPC4L	86	87.263	ENSEASG00005007883	PABPC4L	99	87.263	Equus_asinus_asinus
ENSCCAG00000031681	PABPC4L	86	87.534	ENSECAG00000031416	PABPC4L	99	87.534	Equus_caballus
ENSCCAG00000031681	PABPC4L	86	88.076	ENSFCAG00000028270	PABPC4L	99	88.076	Felis_catus
ENSCCAG00000031681	PABPC4L	86	82.656	ENSFDAG00000019606	PABPC4L	99	82.656	Fukomys_damarensis
ENSCCAG00000031681	PABPC4L	86	96.757	ENSGGOG00000024991	PABPC4L	100	96.757	Gorilla_gorilla
ENSCCAG00000031681	PABPC4L	86	83.198	ENSHGLG00000020104	PABPC4L	99	83.198	Heterocephalus_glaber_female
ENSCCAG00000031681	PABPC4L	86	83.198	ENSHGLG00100020648	PABPC4L	99	83.198	Heterocephalus_glaber_male
ENSCCAG00000031681	PABPC4L	87	86.523	ENSSTOG00000019472	PABPC4L	99	86.523	Ictidomys_tridecemlineatus
ENSCCAG00000031681	PABPC4L	86	82.114	ENSJJAG00000004090	Pabpc4l	99	82.114	Jaculus_jaculus
ENSCCAG00000031681	PABPC4L	86	82.703	ENSMAUG00000016313	Pabpc4l	100	82.703	Mesocricetus_auratus
ENSCCAG00000031681	PABPC4L	86	92.703	ENSMICG00000029683	PABPC4L	100	92.703	Microcebus_murinus
ENSCCAG00000031681	PABPC4L	86	83.784	ENSMOCG00000007551	Pabpc4l	100	83.784	Microtus_ochrogaster
ENSCCAG00000031681	PABPC4L	86	80.541	MGP_CAROLIEiJ_G0024968	Pabpc4l	100	80.541	Mus_caroli
ENSCCAG00000031681	PABPC4L	86	80.811	ENSMUSG00000090919	Pabpc4l	100	80.811	Mus_musculus
ENSCCAG00000031681	PABPC4L	86	81.081	MGP_PahariEiJ_G0026409	Pabpc4l	100	81.081	Mus_pahari
ENSCCAG00000031681	PABPC4L	86	80.270	MGP_SPRETEiJ_G0025903	Pabpc4l	100	80.270	Mus_spretus
ENSCCAG00000031681	PABPC4L	86	78.320	ENSMLUG00000008254	PABPC4L	99	78.320	Myotis_lucifugus
ENSCCAG00000031681	PABPC4L	86	86.486	ENSNGAG00000001502	Pabpc4l	100	86.486	Nannospalax_galili
ENSCCAG00000031681	PABPC4L	86	96.757	ENSNLEG00000019300	PABPC4L	100	96.757	Nomascus_leucogenys
ENSCCAG00000031681	PABPC4L	86	85.135	ENSOGAG00000026166	PABPC4L	100	85.135	Otolemur_garnettii
ENSCCAG00000031681	PABPC4L	87	96.904	ENSPPAG00000043745	PABPC4L	93	96.904	Pan_paniscus
ENSCCAG00000031681	PABPC4L	86	87.534	ENSPPRG00000018628	PABPC4L	99	87.534	Panthera_pardus
ENSCCAG00000031681	PABPC4L	86	88.076	ENSPTIG00000010106	PABPC4L	99	88.076	Panthera_tigris_altaica
ENSCCAG00000031681	PABPC4L	99	95.013	ENSPTRG00000045513	-	89	95.013	Pan_troglodytes
ENSCCAG00000031681	PABPC4L	86	82.703	ENSPEMG00000012565	Pabpc4l	100	82.703	Peromyscus_maniculatus_bairdii
ENSCCAG00000031681	PABPC4L	86	92.703	ENSPCOG00000025578	PABPC4L	100	92.703	Propithecus_coquereli
ENSCCAG00000031681	PABPC4L	86	81.351	ENSRNOG00000029749	Pabpc4l	100	81.351	Rattus_norvegicus
ENSCCAG00000031681	PABPC4L	86	94.054	ENSRBIG00000030229	PABPC4L	100	94.054	Rhinopithecus_bieti
ENSCCAG00000031681	PABPC4L	86	93.784	ENSRROG00000020367	PABPC4L	100	93.784	Rhinopithecus_roxellana
ENSCCAG00000031681	PABPC4L	86	97.297	ENSSBOG00000016382	PABPC4L	100	97.297	Saimiri_boliviensis_boliviensis
ENSCCAG00000031681	PABPC4L	87	81.572	ENSSSCG00000009067	PABPC4L	99	81.572	Sus_scrofa
ENSCCAG00000031681	PABPC4L	86	87.805	ENSUAMG00000001289	PABPC4L	99	87.805	Ursus_americanus
ENSCCAG00000031681	PABPC4L	86	87.805	ENSUMAG00000014887	PABPC4L	99	87.805	Ursus_maritimus
ENSCCAG00000031681	PABPC4L	75	75.460	ENSVVUG00000011060	-	74	75.460	Vulpes_vulpes