EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000031723 (Gene tree)
Gene ID: 108283585
Gene Symbol: RAVER1
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 17884 bases
Position: chrKV389689.1:522468-540351
Accession: 108283585
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000027759	RRM_1	PF00076.22	2e-28	1	2
ENSCCAP00000027759	RRM_1	PF00076.22	2e-28	2	2
ENSCCAP00000027748	RRM_1	PF00076.22	2e-28	1	2
ENSCCAP00000027748	RRM_1	PF00076.22	2e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000045354	RAVER1-202	2253	-	ENSCCAP00000027759	750 (aa)	-	A0A2K5RHZ1
ENSCCAT00000045342	RAVER1-201	3561	XM_017499976	ENSCCAP00000027748	756 (aa)	XP_017355465	A0A2K5RI01

Gene Model

Click here to download ENSCCAG00000031723's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000031723's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000031723	RAVER1	65	44.685	ENSCCAG00000029834	RAVER2	51	56.410

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000031723	RAVER1	100	96.164	ENSG00000161847	RAVER1	100	96.164	Homo_sapiens
ENSCCAG00000031723	RAVER1	67	59.524	ENSAPOG00000017267	raver1	62	59.524	Acanthochromis_polyacanthus
ENSCCAG00000031723	RAVER1	100	90.514	ENSAMEG00000011738	RAVER1	100	90.119	Ailuropoda_melanoleuca
ENSCCAG00000031723	RAVER1	67	59.400	ENSAOCG00000005128	raver1	65	59.400	Amphiprion_ocellaris
ENSCCAG00000031723	RAVER1	74	76.786	ENSAPEG00000010854	raver1	82	78.846	Amphiprion_percula
ENSCCAG00000031723	RAVER1	98	50.928	ENSATEG00000021004	raver1	94	50.601	Anabas_testudineus
ENSCCAG00000031723	RAVER1	84	59.451	ENSACAG00000008386	-	97	57.103	Anolis_carolinensis
ENSCCAG00000031723	RAVER1	100	98.018	ENSANAG00000028226	RAVER1	100	98.018	Aotus_nancymaae
ENSCCAG00000031723	RAVER1	65	60.986	ENSACLG00000018492	raver1	68	61.317	Astatotilapia_calliptera
ENSCCAG00000031723	RAVER1	76	84.000	ENSAMXG00000005132	raver1	89	84.906	Astyanax_mexicanus
ENSCCAG00000031723	RAVER1	100	89.286	ENSBTAG00000015721	RAVER1	100	94.484	Bos_taurus
ENSCCAG00000031723	RAVER1	100	98.018	ENSCJAG00000005671	RAVER1	100	98.018	Callithrix_jacchus
ENSCCAG00000031723	RAVER1	100	89.550	ENSCAFG00000017861	RAVER1	100	89.418	Canis_familiaris
ENSCCAG00000031723	RAVER1	98	89.310	ENSCAFG00020024449	RAVER1	100	89.175	Canis_lupus_dingo
ENSCCAG00000031723	RAVER1	98	88.919	ENSCHIG00000006718	RAVER1	100	89.189	Capra_hircus
ENSCCAG00000031723	RAVER1	89	84.741	ENSTSYG00000027107	RAVER1	100	84.148	Carlito_syrichta
ENSCCAG00000031723	RAVER1	88	88.024	ENSCAPG00000002269	RAVER1	100	87.275	Cavia_aperea
ENSCCAG00000031723	RAVER1	98	89.204	ENSCPOG00000001008	RAVER1	100	88.799	Cavia_porcellus
ENSCCAG00000031723	RAVER1	100	96.561	ENSCATG00000043863	RAVER1	100	96.561	Cercocebus_atys
ENSCCAG00000031723	RAVER1	98	90.579	ENSCLAG00000009336	RAVER1	100	89.233	Chinchilla_lanigera
ENSCCAG00000031723	RAVER1	100	96.561	ENSCSAG00000007317	RAVER1	86	96.561	Chlorocebus_sabaeus
ENSCCAG00000031723	RAVER1	94	62.452	ENSCPBG00000005349	-	96	61.032	Chrysemys_picta_bellii
ENSCCAG00000031723	RAVER1	100	96.296	ENSCANG00000008337	RAVER1	100	96.296	Colobus_angolensis_palliatus
ENSCCAG00000031723	RAVER1	98	89.084	ENSCGRG00001013260	-	100	89.623	Cricetulus_griseus_chok1gshd
ENSCCAG00000031723	RAVER1	98	89.084	ENSCGRG00000015138	-	100	89.623	Cricetulus_griseus_crigri
ENSCCAG00000031723	RAVER1	73	83.333	ENSCSEG00000021092	raver1	78	83.333	Cynoglossus_semilaevis
ENSCCAG00000031723	RAVER1	95	50.342	ENSCVAG00000013971	raver1	92	49.931	Cyprinodon_variegatus
ENSCCAG00000031723	RAVER1	94	51.460	ENSDARG00000052617	raver1	91	51.182	Danio_rerio
ENSCCAG00000031723	RAVER1	98	82.275	ENSDORG00000010106	-	100	81.481	Dipodomys_ordii
ENSCCAG00000031723	RAVER1	61	97.059	ENSETEG00000008201	-	77	87.310	Echinops_telfairi
ENSCCAG00000031723	RAVER1	64	94.541	ENSEASG00005010544	-	84	94.541	Equus_asinus_asinus
ENSCCAG00000031723	RAVER1	100	91.831	ENSECAG00000024966	RAVER1	100	91.700	Equus_caballus
ENSCCAG00000031723	RAVER1	96	51.560	ENSELUG00000023287	raver1	93	52.394	Esox_lucius
ENSCCAG00000031723	RAVER1	100	91.963	ENSFCAG00000009435	RAVER1	100	91.304	Felis_catus
ENSCCAG00000031723	RAVER1	98	89.367	ENSFDAG00000015113	RAVER1	100	88.560	Fukomys_damarensis
ENSCCAG00000031723	RAVER1	77	60.569	ENSGMOG00000003649	raver1	80	60.569	Gadus_morhua
ENSCCAG00000031723	RAVER1	65	46.293	ENSGALG00000050608	-	53	45.898	Gallus_gallus
ENSCCAG00000031723	RAVER1	50	65.775	ENSGACG00000013818	raver1	69	57.605	Gasterosteus_aculeatus
ENSCCAG00000031723	RAVER1	94	62.918	ENSGAGG00000011748	-	96	76.075	Gopherus_agassizii
ENSCCAG00000031723	RAVER1	100	95.899	ENSGGOG00000006015	RAVER1	100	95.899	Gorilla_gorilla
ENSCCAG00000031723	RAVER1	65	60.986	ENSHBUG00000021210	raver1	68	61.317	Haplochromis_burtoni
ENSCCAG00000031723	RAVER1	98	89.367	ENSHGLG00000015460	RAVER1	100	88.964	Heterocephalus_glaber_female
ENSCCAG00000031723	RAVER1	98	89.367	ENSHGLG00100000812	RAVER1	100	88.964	Heterocephalus_glaber_male
ENSCCAG00000031723	RAVER1	96	50.340	ENSHCOG00000000449	raver1	91	50.204	Hippocampus_comes
ENSCCAG00000031723	RAVER1	95	53.306	ENSIPUG00000013153	raver1	83	61.000	Ictalurus_punctatus
ENSCCAG00000031723	RAVER1	98	91.903	ENSSTOG00000003241	RAVER1	100	91.768	Ictidomys_tridecemlineatus
ENSCCAG00000031723	RAVER1	98	90.201	ENSJJAG00000018219	-	100	89.396	Jaculus_jaculus
ENSCCAG00000031723	RAVER1	96	51.425	ENSKMAG00000017355	raver1	93	50.538	Kryptolebias_marmoratus
ENSCCAG00000031723	RAVER1	87	50.890	ENSLBEG00000008268	raver1	70	59.961	Labrus_bergylta
ENSCCAG00000031723	RAVER1	88	60.545	ENSLACG00000005809	-	99	59.886	Latimeria_chalumnae
ENSCCAG00000031723	RAVER1	95	55.674	ENSLOCG00000007500	raver1	94	53.273	Lepisosteus_oculatus
ENSCCAG00000031723	RAVER1	98	90.175	ENSLAFG00000003664	-	100	90.713	Loxodonta_africana
ENSCCAG00000031723	RAVER1	100	96.032	ENSMFAG00000037977	RAVER1	100	96.032	Macaca_fascicularis
ENSCCAG00000031723	RAVER1	100	96.296	ENSMMUG00000014897	RAVER1	100	96.296	Macaca_mulatta
ENSCCAG00000031723	RAVER1	100	96.296	ENSMNEG00000028390	RAVER1	100	96.296	Macaca_nemestrina
ENSCCAG00000031723	RAVER1	100	96.561	ENSMLEG00000041959	RAVER1	100	96.561	Mandrillus_leucophaeus
ENSCCAG00000031723	RAVER1	73	83.333	ENSMAMG00000012059	raver1	78	83.333	Mastacembelus_armatus
ENSCCAG00000031723	RAVER1	65	60.986	ENSMZEG00005019002	raver1	68	61.317	Maylandia_zebra
ENSCCAG00000031723	RAVER1	98	88.575	ENSMAUG00000017948	-	100	88.306	Mesocricetus_auratus
ENSCCAG00000031723	RAVER1	99	90.728	ENSMICG00000010326	RAVER1	99	90.464	Microcebus_murinus
ENSCCAG00000031723	RAVER1	98	89.623	ENSMOCG00000015553	-	100	89.353	Microtus_ochrogaster
ENSCCAG00000031723	RAVER1	96	51.626	ENSMMOG00000012093	raver1	67	59.245	Mola_mola
ENSCCAG00000031723	RAVER1	96	76.599	ENSMODG00000005584	-	91	76.152	Monodelphis_domestica
ENSCCAG00000031723	RAVER1	98	87.032	MGP_CAROLIEiJ_G0031860	-	100	87.567	Mus_caroli
ENSCCAG00000031723	RAVER1	98	87.032	ENSMUSG00000010205	Raver1	100	87.701	Mus_musculus
ENSCCAG00000031723	RAVER1	98	86.037	MGP_PahariEiJ_G0014726	-	100	87.500	Mus_pahari
ENSCCAG00000031723	RAVER1	98	86.898	MGP_SPRETEiJ_G0032984	-	100	87.567	Mus_spretus
ENSCCAG00000031723	RAVER1	100	92.227	ENSMPUG00000006712	RAVER1	100	91.568	Mustela_putorius_furo
ENSCCAG00000031723	RAVER1	98	89.310	ENSMLUG00000012328	RAVER1	100	88.904	Myotis_lucifugus
ENSCCAG00000031723	RAVER1	98	87.973	ENSNGAG00000001260	-	100	87.027	Nannospalax_galili
ENSCCAG00000031723	RAVER1	65	50.511	ENSNBRG00000010139	raver1	65	52.653	Neolamprologus_brichardi
ENSCCAG00000031723	RAVER1	100	94.974	ENSNLEG00000012181	RAVER1	100	94.974	Nomascus_leucogenys
ENSCCAG00000031723	RAVER1	88	75.635	ENSMEUG00000003281	-	100	73.661	Notamacropus_eugenii
ENSCCAG00000031723	RAVER1	98	90.444	ENSODEG00000016260	RAVER1	100	89.098	Octodon_degus
ENSCCAG00000031723	RAVER1	94	51.888	ENSONIG00000001559	raver1	99	51.816	Oreochromis_niloticus
ENSCCAG00000031723	RAVER1	100	84.788	ENSOCUG00000020918	RAVER1	100	83.333	Oryctolagus_cuniculus
ENSCCAG00000031723	RAVER1	69	65.023	ENSORLG00000005458	raver1	70	65.023	Oryzias_latipes
ENSCCAG00000031723	RAVER1	72	65.258	ENSORLG00020004392	raver1	70	65.258	Oryzias_latipes_hni
ENSCCAG00000031723	RAVER1	69	65.023	ENSORLG00015017222	raver1	70	65.023	Oryzias_latipes_hsok
ENSCCAG00000031723	RAVER1	60	81.633	ENSOMEG00000023956	raver1	67	81.633	Oryzias_melastigma
ENSCCAG00000031723	RAVER1	100	91.799	ENSOGAG00000011071	RAVER1	100	90.608	Otolemur_garnettii
ENSCCAG00000031723	RAVER1	100	87.747	ENSOARG00000015886	RAVER1	100	87.747	Ovis_aries
ENSCCAG00000031723	RAVER1	100	96.164	ENSPPAG00000002611	RAVER1	100	96.164	Pan_paniscus
ENSCCAG00000031723	RAVER1	100	92.358	ENSPPRG00000009912	RAVER1	100	91.700	Panthera_pardus
ENSCCAG00000031723	RAVER1	100	96.164	ENSPTRG00000010466	RAVER1	100	96.164	Pan_troglodytes
ENSCCAG00000031723	RAVER1	100	96.693	ENSPANG00000004122	RAVER1	100	96.693	Papio_anubis
ENSCCAG00000031723	RAVER1	98	89.098	ENSPEMG00000016411	-	100	89.233	Peromyscus_maniculatus_bairdii
ENSCCAG00000031723	RAVER1	98	77.584	ENSPCIG00000018695	-	100	77.181	Phascolarctos_cinereus
ENSCCAG00000031723	RAVER1	95	51.216	ENSPFOG00000007016	raver1	67	59.010	Poecilia_formosa
ENSCCAG00000031723	RAVER1	95	49.458	ENSPLAG00000020793	raver1	76	80.000	Poecilia_latipinna
ENSCCAG00000031723	RAVER1	95	52.381	ENSPMEG00000011220	raver1	68	67.980	Poecilia_mexicana
ENSCCAG00000031723	RAVER1	71	88.372	ENSPREG00000006864	raver1	77	88.372	Poecilia_reticulata
ENSCCAG00000031723	RAVER1	100	95.238	ENSPPYG00000010514	RAVER1	85	95.238	Pongo_abelii
ENSCCAG00000031723	RAVER1	100	91.721	ENSPCOG00000026605	RAVER1	100	91.327	Propithecus_coquereli
ENSCCAG00000031723	RAVER1	98	91.069	ENSPVAG00000003689	RAVER1	100	89.716	Pteropus_vampyrus
ENSCCAG00000031723	RAVER1	59	85.417	ENSPNYG00000013284	raver1	63	85.417	Pundamilia_nyererei
ENSCCAG00000031723	RAVER1	97	50.596	ENSPNAG00000015476	raver1	72	57.757	Pygocentrus_nattereri
ENSCCAG00000031723	RAVER1	98	87.701	ENSRNOG00000020710	Raver1	100	87.701	Rattus_norvegicus
ENSCCAG00000031723	RAVER1	100	96.429	ENSRBIG00000034702	RAVER1	100	96.429	Rhinopithecus_bieti
ENSCCAG00000031723	RAVER1	100	93.519	ENSRROG00000031186	RAVER1	100	93.519	Rhinopithecus_roxellana
ENSCCAG00000031723	RAVER1	100	95.370	ENSSBOG00000023423	RAVER1	100	95.370	Saimiri_boliviensis_boliviensis
ENSCCAG00000031723	RAVER1	88	77.037	ENSSHAG00000008181	-	90	76.148	Sarcophilus_harrisii
ENSCCAG00000031723	RAVER1	73	78.571	ENSSDUG00000021063	raver1	79	82.000	Seriola_dumerili
ENSCCAG00000031723	RAVER1	95	52.316	ENSSLDG00000014505	raver1	67	60.474	Seriola_lalandi_dorsalis
ENSCCAG00000031723	RAVER1	95	52.486	ENSSPAG00000000688	raver1	67	60.479	Stegastes_partitus
ENSCCAG00000031723	RAVER1	100	91.281	ENSSSCG00000013650	-	100	90.621	Sus_scrofa
ENSCCAG00000031723	RAVER1	97	51.210	ENSTRUG00000025641	raver1	67	59.763	Takifugu_rubripes
ENSCCAG00000031723	RAVER1	98	90.798	ENSTTRG00000009552	RAVER1	100	89.986	Tursiops_truncatus
ENSCCAG00000031723	RAVER1	100	92.358	ENSUAMG00000020385	RAVER1	100	91.963	Ursus_americanus
ENSCCAG00000031723	RAVER1	100	89.815	ENSVVUG00000028976	RAVER1	100	89.683	Vulpes_vulpes
ENSCCAG00000031723	RAVER1	98	56.308	ENSXETG00000011622	raver1	100	54.400	Xenopus_tropicalis
ENSCCAG00000031723	RAVER1	97	51.004	ENSXCOG00000016368	raver1	73	61.572	Xiphophorus_couchianus