EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000032646 (Gene tree)
Gene ID: -
Gene Symbol: SRL
Alias: SAR
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 52157 bases
Position: chrKV389748.1:1797811-1849967
Accession: 11295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000029192	MMR_HSR1	PF01926.23	8.5e-09	1	1
ENSCCAP00000029187	MMR_HSR1	PF01926.23	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000046926	SRL-202	4412	-	ENSCCAP00000029192	379 (aa)	-	A0A2K5RM21
ENSCCAT00000046921	SRL-201	1341	-	ENSCCAP00000029187	446 (aa)	-	A0A2K5RM15

Gene Model

Click here to download ENSCCAG00000032646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000032646's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000032646	SRL	85	34.056	ENSCCAG00000029860	EHD3	64	33.333
ENSCCAG00000032646	SRL	92	32.857	ENSCCAG00000035777	EHD2	63	32.958
ENSCCAG00000032646	SRL	85	34.056	ENSCCAG00000004590	EHD1	70	33.051
ENSCCAG00000032646	SRL	67	36.614	ENSCCAG00000030886	EHD4	52	35.088

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000032646	SRL	100	99.472	ENSG00000185739	SRL	100	93.039	Homo_sapiens
ENSCCAG00000032646	SRL	100	84.697	ENSAPOG00000018093	srl	99	77.551	Acanthochromis_polyacanthus
ENSCCAG00000032646	SRL	100	78.100	ENSAPOG00000012432	SRL	98	70.694	Acanthochromis_polyacanthus
ENSCCAG00000032646	SRL	100	98.153	ENSAMEG00000010862	SRL	51	91.170	Ailuropoda_melanoleuca
ENSCCAG00000032646	SRL	100	84.433	ENSACIG00000015799	srl	98	77.602	Amphilophus_citrinellus
ENSCCAG00000032646	SRL	100	78.100	ENSACIG00000015419	SRL	98	71.946	Amphilophus_citrinellus
ENSCCAG00000032646	SRL	100	77.632	ENSAOCG00000017049	SRL	96	71.783	Amphiprion_ocellaris
ENSCCAG00000032646	SRL	100	84.697	ENSAOCG00000007574	srl	91	83.838	Amphiprion_ocellaris
ENSCCAG00000032646	SRL	100	73.351	ENSAPEG00000006533	SRL	96	67.873	Amphiprion_percula
ENSCCAG00000032646	SRL	100	84.697	ENSAPEG00000006911	srl	94	77.828	Amphiprion_percula
ENSCCAG00000032646	SRL	100	75.000	ENSATEG00000009643	SRL	52	68.571	Anabas_testudineus
ENSCCAG00000032646	SRL	100	84.433	ENSATEG00000024315	srl	94	77.602	Anabas_testudineus
ENSCCAG00000032646	SRL	100	93.140	ENSACAG00000016380	SRL	83	84.327	Anolis_carolinensis
ENSCCAG00000032646	SRL	100	84.433	ENSACLG00000027685	srl	97	77.602	Astatotilapia_calliptera
ENSCCAG00000032646	SRL	100	75.255	ENSACLG00000024674	SRL	57	71.259	Astatotilapia_calliptera
ENSCCAG00000032646	SRL	93	80.398	ENSAMXG00000038693	SRL	100	69.316	Astyanax_mexicanus
ENSCCAG00000032646	SRL	99	85.185	ENSAMXG00000018789	srl	86	78.685	Astyanax_mexicanus
ENSCCAG00000032646	SRL	99	96.825	ENSBTAG00000001078	SRL	56	90.498	Bos_taurus
ENSCCAG00000032646	SRL	100	99.736	ENSCJAG00000019750	SRL	100	93.658	Callithrix_jacchus
ENSCCAG00000032646	SRL	100	98.153	ENSCAFG00000019233	SRL	84	90.969	Canis_familiaris
ENSCCAG00000032646	SRL	100	98.153	ENSCAFG00020025024	SRL	56	90.591	Canis_lupus_dingo
ENSCCAG00000032646	SRL	99	96.825	ENSCHIG00000017927	SRL	55	90.498	Capra_hircus
ENSCCAG00000032646	SRL	100	98.417	ENSTSYG00000007919	SRL	100	91.879	Carlito_syrichta
ENSCCAG00000032646	SRL	100	97.889	ENSCPOG00000012643	SRL	94	90.971	Cavia_porcellus
ENSCCAG00000032646	SRL	100	99.472	ENSCATG00000032227	-	100	93.235	Cercocebus_atys
ENSCCAG00000032646	SRL	100	97.889	ENSCLAG00000016242	SRL	94	90.971	Chinchilla_lanigera
ENSCCAG00000032646	SRL	99	97.090	ENSCHOG00000001618	SRL	52	97.143	Choloepus_hoffmanni
ENSCCAG00000032646	SRL	99	92.857	ENSCPBG00000026371	SRL	93	84.071	Chrysemys_picta_bellii
ENSCCAG00000032646	SRL	93	63.456	ENSCING00000005231	-	79	63.380	Ciona_intestinalis
ENSCCAG00000032646	SRL	100	99.472	ENSCANG00000035872	SRL	100	93.039	Colobus_angolensis_palliatus
ENSCCAG00000032646	SRL	100	97.625	ENSCGRG00001016630	Srl	100	89.006	Cricetulus_griseus_chok1gshd
ENSCCAG00000032646	SRL	100	97.625	ENSCGRG00000005458	Srl	100	89.006	Cricetulus_griseus_crigri
ENSCCAG00000032646	SRL	100	74.474	ENSCSEG00000011866	SRL	89	69.074	Cynoglossus_semilaevis
ENSCCAG00000032646	SRL	100	84.697	ENSCSEG00000016151	srl	94	77.828	Cynoglossus_semilaevis
ENSCCAG00000032646	SRL	100	85.488	ENSCVAG00000003513	srl	96	78.507	Cyprinodon_variegatus
ENSCCAG00000032646	SRL	100	76.607	ENSCVAG00000022465	SRL	60	69.912	Cyprinodon_variegatus
ENSCCAG00000032646	SRL	100	76.823	ENSDARG00000112959	CABZ01072309.1	100	76.562	Danio_rerio
ENSCCAG00000032646	SRL	100	86.016	ENSDARG00000104587	srl	94	79.412	Danio_rerio
ENSCCAG00000032646	SRL	100	98.417	ENSDNOG00000011643	SRL	55	91.228	Dasypus_novemcinctus
ENSCCAG00000032646	SRL	100	97.361	ENSDORG00000014807	Srl	94	91.196	Dipodomys_ordii
ENSCCAG00000032646	SRL	93	67.887	ENSEBUG00000015937	srl	88	68.103	Eptatretus_burgeri
ENSCCAG00000032646	SRL	99	97.619	ENSEASG00005000942	SRL	55	90.330	Equus_asinus_asinus
ENSCCAG00000032646	SRL	99	97.619	ENSECAG00000024219	SRL	99	90.466	Equus_caballus
ENSCCAG00000032646	SRL	100	84.211	ENSELUG00000015616	srl	94	75.658	Esox_lucius
ENSCCAG00000032646	SRL	100	97.361	ENSFCAG00000022075	SRL	100	89.852	Felis_catus
ENSCCAG00000032646	SRL	99	92.328	ENSFALG00000004328	SRL	63	85.682	Ficedula_albicollis
ENSCCAG00000032646	SRL	100	98.417	ENSFDAG00000006199	SRL	94	91.648	Fukomys_damarensis
ENSCCAG00000032646	SRL	100	84.697	ENSFHEG00000011239	srl	95	77.828	Fundulus_heteroclitus
ENSCCAG00000032646	SRL	100	77.309	ENSFHEG00000011854	SRL	98	72.624	Fundulus_heteroclitus
ENSCCAG00000032646	SRL	99	85.185	ENSGMOG00000014954	srl	99	76.600	Gadus_morhua
ENSCCAG00000032646	SRL	99	91.799	ENSGALG00000038884	SRL	93	85.455	Gallus_gallus
ENSCCAG00000032646	SRL	100	84.697	ENSGAFG00000000010	srl	96	77.828	Gambusia_affinis
ENSCCAG00000032646	SRL	100	77.836	ENSGAFG00000016984	SRL	98	72.172	Gambusia_affinis
ENSCCAG00000032646	SRL	99	84.392	ENSGACG00000011332	srl	99	75.717	Gasterosteus_aculeatus
ENSCCAG00000032646	SRL	100	99.472	ENSGGOG00000011312	-	100	92.812	Gorilla_gorilla
ENSCCAG00000032646	SRL	100	84.433	ENSHBUG00000007581	srl	97	77.602	Haplochromis_burtoni
ENSCCAG00000032646	SRL	100	75.000	ENSHBUG00000015710	SRL	58	67.872	Haplochromis_burtoni
ENSCCAG00000032646	SRL	100	98.681	ENSHGLG00000015271	SRL	94	92.099	Heterocephalus_glaber_female
ENSCCAG00000032646	SRL	100	98.681	ENSHGLG00100019378	SRL	94	92.099	Heterocephalus_glaber_male
ENSCCAG00000032646	SRL	100	73.590	ENSHCOG00000001012	SRL	50	67.550	Hippocampus_comes
ENSCCAG00000032646	SRL	100	84.169	ENSHCOG00000008687	srl	98	77.149	Hippocampus_comes
ENSCCAG00000032646	SRL	100	84.960	ENSIPUG00000012513	srl	95	77.828	Ictalurus_punctatus
ENSCCAG00000032646	SRL	98	72.118	ENSIPUG00000011609	SRL	95	64.908	Ictalurus_punctatus
ENSCCAG00000032646	SRL	100	97.889	ENSSTOG00000021151	-	100	89.006	Ictidomys_tridecemlineatus
ENSCCAG00000032646	SRL	100	97.361	ENSJJAG00000016400	Srl	94	90.745	Jaculus_jaculus
ENSCCAG00000032646	SRL	100	78.364	ENSKMAG00000019537	SRL	100	72.562	Kryptolebias_marmoratus
ENSCCAG00000032646	SRL	100	85.224	ENSKMAG00000014115	srl	87	84.343	Kryptolebias_marmoratus
ENSCCAG00000032646	SRL	100	77.895	ENSLBEG00000013811	SRL	95	71.946	Labrus_bergylta
ENSCCAG00000032646	SRL	100	84.169	ENSLBEG00000026643	srl	94	77.602	Labrus_bergylta
ENSCCAG00000032646	SRL	100	87.599	ENSLACG00000002825	SRL	98	81.038	Latimeria_chalumnae
ENSCCAG00000032646	SRL	100	86.280	ENSLOCG00000002644	srl	94	80.543	Lepisosteus_oculatus
ENSCCAG00000032646	SRL	100	97.889	ENSLAFG00000006329	SRL	52	90.728	Loxodonta_africana
ENSCCAG00000032646	SRL	100	99.472	ENSMFAG00000037383	SRL	100	93.039	Macaca_fascicularis
ENSCCAG00000032646	SRL	100	99.472	ENSMNEG00000019236	-	100	89.770	Macaca_nemestrina
ENSCCAG00000032646	SRL	100	97.889	ENSMLEG00000032156	SRL	100	96.637	Mandrillus_leucophaeus
ENSCCAG00000032646	SRL	100	75.000	ENSMAMG00000013756	SRL	53	69.737	Mastacembelus_armatus
ENSCCAG00000032646	SRL	100	84.433	ENSMAMG00000023322	srl	94	77.602	Mastacembelus_armatus
ENSCCAG00000032646	SRL	100	84.433	ENSMZEG00005004548	srl	97	77.602	Maylandia_zebra
ENSCCAG00000032646	SRL	100	75.255	ENSMZEG00005004010	SRL	59	67.021	Maylandia_zebra
ENSCCAG00000032646	SRL	99	91.534	ENSMGAG00000009342	SRL	92	86.027	Meleagris_gallopavo
ENSCCAG00000032646	SRL	100	97.625	ENSMICG00000032307	SRL	100	90.063	Microcebus_murinus
ENSCCAG00000032646	SRL	100	97.361	ENSMOCG00000008208	Srl	100	88.584	Microtus_ochrogaster
ENSCCAG00000032646	SRL	100	76.781	ENSMMOG00000021572	SRL	85	77.062	Mola_mola
ENSCCAG00000032646	SRL	100	83.905	ENSMMOG00000013970	srl	98	77.149	Mola_mola
ENSCCAG00000032646	SRL	99	97.354	ENSMODG00000016380	-	51	88.596	Monodelphis_domestica
ENSCCAG00000032646	SRL	100	76.517	ENSMALG00000000670	SRL	92	75.000	Monopterus_albus
ENSCCAG00000032646	SRL	100	83.641	ENSMALG00000005039	srl	98	76.697	Monopterus_albus
ENSCCAG00000032646	SRL	100	97.098	MGP_CAROLIEiJ_G0020400	Srl	94	90.745	Mus_caroli
ENSCCAG00000032646	SRL	100	97.098	ENSMUSG00000022519	Srl	94	90.745	Mus_musculus
ENSCCAG00000032646	SRL	100	97.098	MGP_SPRETEiJ_G0021294	Srl	94	90.745	Mus_spretus
ENSCCAG00000032646	SRL	100	98.153	ENSMPUG00000015025	SRL	55	90.570	Mustela_putorius_furo
ENSCCAG00000032646	SRL	100	96.834	ENSMLUG00000030733	SRL	56	90.519	Myotis_lucifugus
ENSCCAG00000032646	SRL	100	97.098	ENSNGAG00000019741	Srl	94	90.745	Nannospalax_galili
ENSCCAG00000032646	SRL	100	75.510	ENSNBRG00000002422	SRL	52	74.074	Neolamprologus_brichardi
ENSCCAG00000032646	SRL	100	84.433	ENSNBRG00000023775	srl	94	77.602	Neolamprologus_brichardi
ENSCCAG00000032646	SRL	100	99.472	ENSNLEG00000029051	SRL	100	97.534	Nomascus_leucogenys
ENSCCAG00000032646	SRL	100	97.625	ENSOPRG00000000477	-	53	89.625	Ochotona_princeps
ENSCCAG00000032646	SRL	100	97.889	ENSODEG00000013256	SRL	94	90.971	Octodon_degus
ENSCCAG00000032646	SRL	100	84.433	ENSONIG00000005192	srl	94	77.602	Oreochromis_niloticus
ENSCCAG00000032646	SRL	100	77.045	ENSORLG00000015064	SRL	97	71.429	Oryzias_latipes
ENSCCAG00000032646	SRL	100	84.433	ENSORLG00000008291	srl	92	84.536	Oryzias_latipes
ENSCCAG00000032646	SRL	100	77.309	ENSORLG00020018173	SRL	97	71.655	Oryzias_latipes_hni
ENSCCAG00000032646	SRL	100	84.169	ENSORLG00020019784	srl	79	84.278	Oryzias_latipes_hni
ENSCCAG00000032646	SRL	100	77.573	ENSORLG00015019063	SRL	97	71.882	Oryzias_latipes_hsok
ENSCCAG00000032646	SRL	100	83.905	ENSORLG00015009342	srl	91	76.923	Oryzias_latipes_hsok
ENSCCAG00000032646	SRL	100	84.169	ENSOMEG00000010006	srl	98	76.818	Oryzias_melastigma
ENSCCAG00000032646	SRL	100	75.000	ENSOMEG00000005682	SRL	53	69.737	Oryzias_melastigma
ENSCCAG00000032646	SRL	100	96.042	ENSOGAG00000029266	SRL	54	89.819	Otolemur_garnettii
ENSCCAG00000032646	SRL	99	96.825	ENSOARG00000003074	SRL	55	90.498	Ovis_aries
ENSCCAG00000032646	SRL	100	99.208	ENSPPAG00000024919	-	100	92.807	Pan_paniscus
ENSCCAG00000032646	SRL	100	97.625	ENSPPRG00000010274	SRL	100	91.183	Panthera_pardus
ENSCCAG00000032646	SRL	100	97.625	ENSPTIG00000015162	SRL	100	91.183	Panthera_tigris_altaica
ENSCCAG00000032646	SRL	100	99.208	ENSPTRG00000007712	SRL	100	92.812	Pan_troglodytes
ENSCCAG00000032646	SRL	100	99.472	ENSPANG00000013804	SRL	95	93.228	Papio_anubis
ENSCCAG00000032646	SRL	100	78.628	ENSPKIG00000024974	SRL	88	72.624	Paramormyrops_kingsleyae
ENSCCAG00000032646	SRL	100	85.752	ENSPKIG00000006405	srl	93	79.186	Paramormyrops_kingsleyae
ENSCCAG00000032646	SRL	100	85.224	ENSPMGG00000021081	srl	95	78.555	Periophthalmus_magnuspinnatus
ENSCCAG00000032646	SRL	100	74.406	ENSPMGG00000023505	-	99	68.090	Periophthalmus_magnuspinnatus
ENSCCAG00000032646	SRL	100	97.098	ENSPEMG00000015842	Srl	94	90.745	Peromyscus_maniculatus_bairdii
ENSCCAG00000032646	SRL	99	71.018	ENSPMAG00000004786	srl	89	70.332	Petromyzon_marinus
ENSCCAG00000032646	SRL	99	97.090	ENSPCIG00000012128	SRL	97	90.271	Phascolarctos_cinereus
ENSCCAG00000032646	SRL	100	84.433	ENSPFOG00000011408	srl	93	75.938	Poecilia_formosa
ENSCCAG00000032646	SRL	100	84.433	ENSPLAG00000008017	srl	96	77.602	Poecilia_latipinna
ENSCCAG00000032646	SRL	100	77.836	ENSPLAG00000002932	SRL	98	70.588	Poecilia_latipinna
ENSCCAG00000032646	SRL	100	84.433	ENSPMEG00000006745	srl	96	77.602	Poecilia_mexicana
ENSCCAG00000032646	SRL	100	74.873	ENSPMEG00000005890	SRL	59	68.791	Poecilia_mexicana
ENSCCAG00000032646	SRL	100	78.628	ENSPREG00000000315	SRL	98	71.719	Poecilia_reticulata
ENSCCAG00000032646	SRL	100	84.433	ENSPREG00000007751	srl	98	77.602	Poecilia_reticulata
ENSCCAG00000032646	SRL	100	99.472	ENSPPYG00000007053	SRL	94	96.774	Pongo_abelii
ENSCCAG00000032646	SRL	99	97.090	ENSPCAG00000003378	-	50	90.045	Procavia_capensis
ENSCCAG00000032646	SRL	100	97.889	ENSPCOG00000023135	SRL	100	91.415	Propithecus_coquereli
ENSCCAG00000032646	SRL	100	98.153	ENSPVAG00000006586	SRL	56	91.391	Pteropus_vampyrus
ENSCCAG00000032646	SRL	100	75.255	ENSPNYG00000003423	SRL	58	67.021	Pundamilia_nyererei
ENSCCAG00000032646	SRL	100	84.433	ENSPNYG00000001200	srl	97	77.602	Pundamilia_nyererei
ENSCCAG00000032646	SRL	100	83.905	ENSPNAG00000023106	srl	94	77.602	Pygocentrus_nattereri
ENSCCAG00000032646	SRL	100	77.895	ENSPNAG00000007361	-	91	71.493	Pygocentrus_nattereri
ENSCCAG00000032646	SRL	100	96.834	ENSRNOG00000005269	Srl	50	90.287	Rattus_norvegicus
ENSCCAG00000032646	SRL	100	99.472	ENSRBIG00000042358	SRL	50	93.157	Rhinopithecus_bieti
ENSCCAG00000032646	SRL	100	99.736	ENSSBOG00000029273	SRL	100	93.658	Saimiri_boliviensis_boliviensis
ENSCCAG00000032646	SRL	99	97.354	ENSSHAG00000011715	-	50	90.271	Sarcophilus_harrisii
ENSCCAG00000032646	SRL	100	85.224	ENSSFOG00015009773	srl	94	78.733	Scleropages_formosus
ENSCCAG00000032646	SRL	100	74.430	ENSSMAG00000002232	SRL	50	68.352	Scophthalmus_maximus
ENSCCAG00000032646	SRL	100	83.905	ENSSMAG00000016274	srl	97	77.149	Scophthalmus_maximus
ENSCCAG00000032646	SRL	100	85.224	ENSSDUG00000010808	srl	97	78.054	Seriola_dumerili
ENSCCAG00000032646	SRL	100	75.907	ENSSDUG00000009161	SRL	98	70.824	Seriola_dumerili
ENSCCAG00000032646	SRL	100	85.224	ENSSLDG00000022024	srl	95	78.054	Seriola_lalandi_dorsalis
ENSCCAG00000032646	SRL	100	75.381	ENSSLDG00000014601	SRL	99	70.549	Seriola_lalandi_dorsalis
ENSCCAG00000032646	SRL	99	91.534	ENSSPUG00000016859	SRL	97	85.034	Sphenodon_punctatus
ENSCCAG00000032646	SRL	100	78.100	ENSSPAG00000014254	SRL	98	70.975	Stegastes_partitus
ENSCCAG00000032646	SRL	100	84.960	ENSSPAG00000019105	srl	94	78.054	Stegastes_partitus
ENSCCAG00000032646	SRL	99	97.090	ENSSSCG00000007949	SRL	98	90.950	Sus_scrofa
ENSCCAG00000032646	SRL	94	91.620	ENSTGUG00000016121	-	96	92.529	Taeniopygia_guttata
ENSCCAG00000032646	SRL	99	92.063	ENSTGUG00000003951	-	97	85.455	Taeniopygia_guttata
ENSCCAG00000032646	SRL	100	75.989	ENSTRUG00000013310	SRL	52	75.505	Takifugu_rubripes
ENSCCAG00000032646	SRL	100	84.169	ENSTRUG00000006005	srl	94	77.602	Takifugu_rubripes
ENSCCAG00000032646	SRL	100	84.169	ENSTNIG00000009739	srl	94	77.376	Tetraodon_nigroviridis
ENSCCAG00000032646	SRL	100	97.889	ENSUAMG00000005701	SRL	55	91.422	Ursus_americanus
ENSCCAG00000032646	SRL	100	98.153	ENSUMAG00000002574	SRL	56	90.549	Ursus_maritimus
ENSCCAG00000032646	SRL	100	98.153	ENSVVUG00000016331	-	50	90.789	Vulpes_vulpes
ENSCCAG00000032646	SRL	100	90.765	ENSXETG00000017313	srl	98	84.389	Xenopus_tropicalis
ENSCCAG00000032646	SRL	100	77.309	ENSXCOG00000014584	SRL	98	71.719	Xiphophorus_couchianus
ENSCCAG00000032646	SRL	100	84.697	ENSXCOG00000010424	srl	91	83.838	Xiphophorus_couchianus
ENSCCAG00000032646	SRL	100	75.000	ENSXMAG00000027598	SRL	62	69.451	Xiphophorus_maculatus
ENSCCAG00000032646	SRL	100	84.697	ENSXMAG00000004625	srl	90	77.828	Xiphophorus_maculatus