EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCCAG00000032792 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
U6 snRNA-associated Sm-like protein LSm5 pseudogene
Gene Type
protein_coding
Species
Cebus_capucinus
Status
putative
Strand
Plus strand
Length
271 bases
Position
chrKV389527.1:5489296-5489566
Accession
108310148
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCCAP00000029485LSMPF01423.225.1e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCCAT00000047220-240-ENSCCAP0000002948579 (aa)-A0A2K5RMV8
Gene Model
Click here to download ENSCCAG00000032792's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000032792's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCCAG00000032792-10081.319ENSCCAG00000000821-10081.319
ENSCCAG00000032792-10081.319ENSCCAG00000037808-10081.319
ENSCCAG00000032792-10079.121ENSCCAG00000032123-10079.121
ENSCCAG00000032792-10070.000ENSCCAG00000037334-10070.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCCAG00000032792-10081.319ENSG00000106355LSM510093.548Homo_sapiens
ENSCCAG00000032792-10076.923ENSAPOG00000020779LSM510076.923Acanthochromis_polyacanthus
ENSCCAG00000032792-7790.323ENSAPOG00000011743LSM510090.323Acanthochromis_polyacanthus
ENSCCAG00000032792-10081.319ENSAMEG00000006700LSM510081.319Ailuropoda_melanoleuca
ENSCCAG00000032792-9561.333ENSACIG00000019185lsm59861.333Amphilophus_citrinellus
ENSCCAG00000032792-10076.923ENSAOCG00000001636lsm510076.923Amphiprion_ocellaris
ENSCCAG00000032792-7790.323ENSAPEG00000008201lsm510090.323Amphiprion_percula
ENSCCAG00000032792-10076.923ENSAPEG00000008151lsm510076.923Amphiprion_percula
ENSCCAG00000032792-9072.289ENSATEG00000020470lsm510062.025Anabas_testudineus
ENSCCAG00000032792-7893.651ENSAPLG00000008171LSM58593.651Anas_platyrhynchos
ENSCCAG00000032792-5671.429ENSACAG00000009530LSM59371.429Anolis_carolinensis
ENSCCAG00000032792-10097.468ENSANAG00000037758-10097.468Aotus_nancymaae
ENSCCAG00000032792-10080.220ENSANAG00000034409-10080.220Aotus_nancymaae
ENSCCAG00000032792-9976.667ENSANAG00000024192-9476.667Aotus_nancymaae
ENSCCAG00000032792-9575.862ENSACLG00000012891lsm59975.862Astatotilapia_calliptera
ENSCCAG00000032792-10063.830ENSAMXG00000035543lsm510064.894Astyanax_mexicanus
ENSCCAG00000032792-10081.319ENSBTAG00000002332LSM510081.319Bos_taurus
ENSCCAG00000032792-10060.440WBGene00003079lsm-510060.440Caenorhabditis_elegans
ENSCCAG00000032792-10081.319ENSCJAG00000047379LSM58366.038Callithrix_jacchus
ENSCCAG00000032792-9970.000ENSCJAG00000005678-10070.000Callithrix_jacchus
ENSCCAG00000032792-10080.220ENSCAFG00000019261-10080.220Canis_familiaris
ENSCCAG00000032792-10081.319ENSCAFG00020004946LSM510081.319Canis_lupus_dingo
ENSCCAG00000032792-10081.319ENSCHIG00000024539LSM510081.319Capra_hircus
ENSCCAG00000032792-10079.121ENSCHIG00000004079-10079.121Capra_hircus
ENSCCAG00000032792-7860.811ENSCHIG00000021428-9560.227Capra_hircus
ENSCCAG00000032792-10079.762ENSTSYG00000026530-9179.762Carlito_syrichta
ENSCCAG00000032792-10081.319ENSTSYG00000006449-10081.319Carlito_syrichta
ENSCCAG00000032792-10060.440ENSTSYG00000036637-10060.440Carlito_syrichta
ENSCCAG00000032792-10074.118ENSTSYG00000028728-10074.118Carlito_syrichta
ENSCCAG00000032792-8184.615ENSCAPG00000006980LSM58784.615Cavia_aperea
ENSCCAG00000032792-10081.319ENSCPOG00000036386LSM510081.319Cavia_porcellus
ENSCCAG00000032792-10081.319ENSCATG00000040218LSM510093.548Cercocebus_atys
ENSCCAG00000032792-9972.222ENSCATG00000014790-10072.222Cercocebus_atys
ENSCCAG00000032792-10065.556ENSCLAG00000005062-9065.556Chinchilla_lanigera
ENSCCAG00000032792-10081.319ENSCLAG00000000202LSM510081.319Chinchilla_lanigera
ENSCCAG00000032792-8077.333ENSCHOG00000005335LSM59977.333Choloepus_hoffmanni
ENSCCAG00000032792-10081.319ENSCPBG00000013685LSM510081.319Chrysemys_picta_bellii
ENSCCAG00000032792-9770.787ENSCING00000020625-9970.787Ciona_intestinalis
ENSCCAG00000032792-9469.767ENSCSAVG00000001439-9869.767Ciona_savignyi
ENSCCAG00000032792-10081.319ENSCANG00000039909LSM510093.548Colobus_angolensis_palliatus
ENSCCAG00000032792-10081.319ENSCGRG00001015461Lsm510081.319Cricetulus_griseus_chok1gshd
ENSCCAG00000032792-8193.846ENSCGRG00000007677Lsm58793.846Cricetulus_griseus_crigri
ENSCCAG00000032792-10062.025ENSCSEG00000015286lsm510062.025Cynoglossus_semilaevis
ENSCCAG00000032792-10075.824ENSCVAG00000004262lsm510075.824Cyprinodon_variegatus
ENSCCAG00000032792-10075.824ENSDARG00000071573lsm510090.323Danio_rerio
ENSCCAG00000032792-9572.414ENSDNOG00000049495-9672.414Dasypus_novemcinctus
ENSCCAG00000032792-10081.319ENSDNOG00000034958LSM510081.319Dasypus_novemcinctus
ENSCCAG00000032792-10081.319ENSDORG00000009422Lsm510081.319Dipodomys_ordii
ENSCCAG00000032792-8079.688FBgn0035675CG66107079.688Drosophila_melanogaster
ENSCCAG00000032792-9757.317ENSETEG00000000777-9960.976Echinops_telfairi
ENSCCAG00000032792-8176.923ENSETEG00000016074-8476.923Echinops_telfairi
ENSCCAG00000032792-9962.222ENSETEG00000001469-9962.222Echinops_telfairi
ENSCCAG00000032792-10067.778ENSETEG00000010651-10067.778Echinops_telfairi
ENSCCAG00000032792-10081.319ENSETEG00000018068LSM510081.319Echinops_telfairi
ENSCCAG00000032792-10072.527ENSEBUG00000008540lsm510072.527Eptatretus_burgeri
ENSCCAG00000032792-10081.319ENSEASG00005003500LSM510081.319Equus_asinus_asinus
ENSCCAG00000032792-10069.231ENSECAG00000018445LSM510069.231Equus_caballus
ENSCCAG00000032792-7286.207ENSEEUG00000004102LSM59786.207Erinaceus_europaeus
ENSCCAG00000032792-10075.824ENSELUG00000007792lsm510075.824Esox_lucius
ENSCCAG00000032792-10081.319ENSFCAG00000000230LSM510081.319Felis_catus
ENSCCAG00000032792-8193.846ENSFALG00000001892LSM57893.846Ficedula_albicollis
ENSCCAG00000032792-10058.140ENSFDAG00000008685-10058.140Fukomys_damarensis
ENSCCAG00000032792-10081.319ENSFDAG00000008767LSM510081.319Fukomys_damarensis
ENSCCAG00000032792-8180.000ENSFHEG00000004011lsm56980.000Fundulus_heteroclitus
ENSCCAG00000032792-9975.556ENSGMOG00000018235lsm510075.556Gadus_morhua
ENSCCAG00000032792-10080.220ENSGALG00000041625LSM510080.220Gallus_gallus
ENSCCAG00000032792-7790.323ENSGAFG00000016824lsm510090.323Gambusia_affinis
ENSCCAG00000032792-10076.923ENSGACG00000005528lsm510076.923Gasterosteus_aculeatus
ENSCCAG00000032792-10081.319ENSGAGG00000015593LSM510081.319Gopherus_agassizii
ENSCCAG00000032792-10081.319ENSGGOG00000043469LSM510081.319Gorilla_gorilla
ENSCCAG00000032792-9575.862ENSHBUG00000013773lsm59975.862Haplochromis_burtoni
ENSCCAG00000032792-10081.319ENSHGLG00000011765LSM510081.319Heterocephalus_glaber_female
ENSCCAG00000032792-10082.022ENSHGLG00100015610LSM510082.022Heterocephalus_glaber_male
ENSCCAG00000032792-10062.025ENSHCOG00000008288lsm510062.025Hippocampus_comes
ENSCCAG00000032792-10074.725ENSIPUG00000021095LSM510074.725Ictalurus_punctatus
ENSCCAG00000032792-10081.319ENSSTOG00000012662LSM510081.319Ictidomys_tridecemlineatus
ENSCCAG00000032792-8180.000ENSSTOG00000033886-7380.000Ictidomys_tridecemlineatus
ENSCCAG00000032792-8572.152ENSJJAG00000004475-10072.152Jaculus_jaculus
ENSCCAG00000032792-10073.750ENSJJAG00000016144-9273.750Jaculus_jaculus
ENSCCAG00000032792-10079.121ENSJJAG00000012145-10079.121Jaculus_jaculus
ENSCCAG00000032792-10075.824ENSKMAG00000021861lsm510075.824Kryptolebias_marmoratus
ENSCCAG00000032792-5658.929ENSLBEG00000017379lsm59258.929Labrus_bergylta
ENSCCAG00000032792-10068.132ENSLBEG00000009235LSM57068.132Labrus_bergylta
ENSCCAG00000032792-10076.923ENSLACG00000022448LSM510076.923Latimeria_chalumnae
ENSCCAG00000032792-10075.824ENSLOCG00000012903lsm510075.824Lepisosteus_oculatus
ENSCCAG00000032792-10081.319ENSLAFG00000029579LSM510081.319Loxodonta_africana
ENSCCAG00000032792-10072.500ENSLAFG00000027938-10072.500Loxodonta_africana
ENSCCAG00000032792-10079.121ENSMFAG00000030152-10079.121Macaca_fascicularis
ENSCCAG00000032792-10081.319ENSMFAG00000038508LSM510081.319Macaca_fascicularis
ENSCCAG00000032792-9973.333ENSMMUG00000039822-10073.333Macaca_mulatta
ENSCCAG00000032792-5266.038ENSMMUG00000045129-8366.038Macaca_mulatta
ENSCCAG00000032792-10079.121ENSMMUG00000030131-10079.121Macaca_mulatta
ENSCCAG00000032792-10081.319ENSMNEG00000015331LSM510093.548Macaca_nemestrina
ENSCCAG00000032792-10079.121ENSMNEG00000037935-10079.121Macaca_nemestrina
ENSCCAG00000032792-10081.319ENSMLEG00000024945LSM510081.319Mandrillus_leucophaeus
ENSCCAG00000032792-9771.910ENSMLEG00000034037-10071.910Mandrillus_leucophaeus
ENSCCAG00000032792-10072.527ENSMAMG00000012869lsm510072.527Mastacembelus_armatus
ENSCCAG00000032792-9575.862ENSMZEG00005019554lsm59975.862Maylandia_zebra
ENSCCAG00000032792-10080.220ENSMGAG00000012117LSM510080.220Meleagris_gallopavo
ENSCCAG00000032792-10080.220ENSMAUG00000008132-10080.220Mesocricetus_auratus
ENSCCAG00000032792-10081.319ENSMAUG00000012222Lsm510081.319Mesocricetus_auratus
ENSCCAG00000032792-9982.278ENSMICG00000033928-9682.278Microcebus_murinus
ENSCCAG00000032792-10081.319ENSMICG00000005353LSM510081.319Microcebus_murinus
ENSCCAG00000032792-10081.319ENSMOCG00000012018Lsm510081.319Microtus_ochrogaster
ENSCCAG00000032792-8190.769ENSMMOG00000004026lsm57590.769Mola_mola
ENSCCAG00000032792-7793.548ENSMODG00000013274-10093.548Monodelphis_domestica
ENSCCAG00000032792-7785.484ENSMALG00000010343lsm510085.484Monopterus_albus
ENSCCAG00000032792-10081.319MGP_CAROLIEiJ_G0028421Lsm510081.319Mus_caroli
ENSCCAG00000032792-10081.319ENSMUSG00000091625Lsm510081.319Mus_musculus
ENSCCAG00000032792-10081.319MGP_PahariEiJ_G0022171Lsm510081.319Mus_pahari
ENSCCAG00000032792-10081.319MGP_SPRETEiJ_G0029423Lsm510081.319Mus_spretus
ENSCCAG00000032792-10081.319ENSMLUG00000017028LSM510081.319Myotis_lucifugus
ENSCCAG00000032792-10081.319ENSNGAG00000024142Lsm510081.319Nannospalax_galili
ENSCCAG00000032792-9968.750ENSNGAG00000022569-9668.750Nannospalax_galili
ENSCCAG00000032792-10069.565ENSNGAG00000017707-10069.565Nannospalax_galili
ENSCCAG00000032792-7189.474ENSNBRG00000011386lsm57689.474Neolamprologus_brichardi
ENSCCAG00000032792-10081.319ENSNLEG00000015268LSM510081.319Nomascus_leucogenys
ENSCCAG00000032792-8193.846ENSOPRG00000002443LSM58793.846Ochotona_princeps
ENSCCAG00000032792-10081.319ENSODEG00000008258-10081.319Octodon_degus
ENSCCAG00000032792-10081.319ENSODEG00000019072-10081.319Octodon_degus
ENSCCAG00000032792-7652.459ENSOANG00000014540-8152.459Ornithorhynchus_anatinus
ENSCCAG00000032792-10081.319ENSOCUG00000029043LSM510081.319Oryctolagus_cuniculus
ENSCCAG00000032792-10074.725ENSORLG00000027725lsm55874.725Oryzias_latipes
ENSCCAG00000032792-8189.231ENSORLG00020003019lsm58671.264Oryzias_latipes_hni
ENSCCAG00000032792-10074.725ENSORLG00015003338lsm510074.725Oryzias_latipes_hsok
ENSCCAG00000032792-10073.626ENSOMEG00000001078lsm510073.626Oryzias_melastigma
ENSCCAG00000032792-10081.319ENSOGAG00000013892LSM510081.319Otolemur_garnettii
ENSCCAG00000032792-10081.319ENSOARG00000006944LSM510081.319Ovis_aries
ENSCCAG00000032792-10081.319ENSPPAG00000003697-10081.319Pan_paniscus
ENSCCAG00000032792-10081.319ENSPPRG00000002550LSM510081.319Panthera_pardus
ENSCCAG00000032792-10081.319ENSPTIG00000015604LSM510081.319Panthera_tigris_altaica
ENSCCAG00000032792-10081.319ENSPTRG00000019057LSM510081.319Pan_troglodytes
ENSCCAG00000032792-10070.330ENSPTRG00000049488-10070.330Pan_troglodytes
ENSCCAG00000032792-10078.022ENSPANG00000033477-10078.022Papio_anubis
ENSCCAG00000032792-9973.333ENSPANG00000032538-10073.333Papio_anubis
ENSCCAG00000032792-10081.319ENSPANG00000032179-10081.319Papio_anubis
ENSCCAG00000032792-10075.824ENSPKIG00000011910lsm510075.824Paramormyrops_kingsleyae
ENSCCAG00000032792-7893.651ENSPSIG00000014796LSM58593.651Pelodiscus_sinensis
ENSCCAG00000032792-7790.323ENSPMGG00000011699lsm510090.323Periophthalmus_magnuspinnatus
ENSCCAG00000032792-10061.538ENSPEMG00000022375-10061.538Peromyscus_maniculatus_bairdii
ENSCCAG00000032792-10075.824ENSPFOG00000001433lsm510075.824Poecilia_formosa
ENSCCAG00000032792-10075.824ENSPLAG00000009665lsm510075.824Poecilia_latipinna
ENSCCAG00000032792-10075.824ENSPMEG00000022265lsm510075.824Poecilia_mexicana
ENSCCAG00000032792-7790.323ENSPREG00000022452lsm510090.323Poecilia_reticulata
ENSCCAG00000032792-10078.022ENSPPYG00000017661LSM510078.022Pongo_abelii
ENSCCAG00000032792-8779.012ENSPCAG00000013740LSM510079.012Procavia_capensis
ENSCCAG00000032792-10081.319ENSPVAG00000009786LSM510081.319Pteropus_vampyrus
ENSCCAG00000032792-9575.862ENSPNYG00000022236lsm59975.862Pundamilia_nyererei
ENSCCAG00000032792-10074.725ENSPNAG00000001887lsm510074.725Pygocentrus_nattereri
ENSCCAG00000032792-10081.319ENSRNOG00000042126Lsm510081.319Rattus_norvegicus
ENSCCAG00000032792-10077.174ENSRNOG00000027305AABR07065089.110077.174Rattus_norvegicus
ENSCCAG00000032792-10081.319ENSRBIG00000030340-10081.319Rhinopithecus_bieti
ENSCCAG00000032792-10080.220ENSRBIG00000024431-10080.220Rhinopithecus_bieti
ENSCCAG00000032792-10081.319ENSRBIG00000030714-10081.319Rhinopithecus_bieti
ENSCCAG00000032792-10081.319ENSRBIG00000027803-10093.548Rhinopithecus_bieti
ENSCCAG00000032792-10081.319ENSRROG00000042782-10093.548Rhinopithecus_roxellana
ENSCCAG00000032792-10081.319ENSRROG00000004655-10081.319Rhinopithecus_roxellana
ENSCCAG00000032792-10081.319ENSRROG00000023884-10081.319Rhinopithecus_roxellana
ENSCCAG00000032792-7549.231YER146W-7049.231Saccharomyces_cerevisiae
ENSCCAG00000032792-10096.203ENSSBOG00000034794-10096.203Saimiri_boliviensis_boliviensis
ENSCCAG00000032792-10081.319ENSSBOG00000012312LSM510081.319Saimiri_boliviensis_boliviensis
ENSCCAG00000032792-10079.121ENSSBOG00000019124-10079.121Saimiri_boliviensis_boliviensis
ENSCCAG00000032792-10075.824ENSSFOG00015010099lsm510075.824Scleropages_formosus
ENSCCAG00000032792-10063.291ENSSMAG00000007895lsm510063.291Scophthalmus_maximus
ENSCCAG00000032792-7790.323ENSSDUG00000010762lsm510090.323Seriola_dumerili
ENSCCAG00000032792-7672.131ENSSLDG00000008014-7372.131Seriola_lalandi_dorsalis
ENSCCAG00000032792-10075.824ENSSLDG00000025242lsm510075.824Seriola_lalandi_dorsalis
ENSCCAG00000032792-10053.846ENSSARG00000003330LSM510053.846Sorex_araneus
ENSCCAG00000032792-10079.121ENSSPUG00000002690LSM510091.935Sphenodon_punctatus
ENSCCAG00000032792-10063.291ENSSPAG00000005435lsm510063.291Stegastes_partitus
ENSCCAG00000032792-7268.116ENSSSCG00000029661-9668.116Sus_scrofa
ENSCCAG00000032792-10081.319ENSSSCG00000026064-10081.319Sus_scrofa
ENSCCAG00000032792-10078.022ENSTGUG00000017539LSM510078.022Taeniopygia_guttata
ENSCCAG00000032792-8467.470ENSTRUG00000017749lsm56467.470Takifugu_rubripes
ENSCCAG00000032792-9575.862ENSTNIG00000008695lsm59975.862Tetraodon_nigroviridis
ENSCCAG00000032792-10081.319ENSTBEG00000004876LSM510081.319Tupaia_belangeri
ENSCCAG00000032792-10081.319ENSTTRG00000004237LSM510081.319Tursiops_truncatus
ENSCCAG00000032792-5165.385ENSUAMG00000009786LSM56865.385Ursus_americanus
ENSCCAG00000032792-9981.111ENSUMAG00000002625LSM56581.111Ursus_maritimus
ENSCCAG00000032792-10081.319ENSVPAG00000009985LSM510081.319Vicugna_pacos
ENSCCAG00000032792-10081.319ENSVVUG00000021311LSM510081.319Vulpes_vulpes
ENSCCAG00000032792-8974.390ENSXETG00000026465lsm510074.390Xenopus_tropicalis
ENSCCAG00000032792-7790.323ENSXCOG00000015348lsm510090.323Xiphophorus_couchianus
ENSCCAG00000032792-10075.824ENSXMAG00000029988lsm510075.824Xiphophorus_maculatus

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