EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000032975 (Gene tree)
Gene ID: 108287448
Gene Symbol: CSTF2
Alias: CstF-64
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 23431 bases
Position: chrKV389769.1:945505-968935
Accession: 108287448
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000030052	RRM_1	PF00076.22	1.8e-25	1	1
ENSCCAP00000030016	RRM_1	PF00076.22	2.2e-25	1	1
ENSCCAP00000030045	RRM_1	PF00076.22	2.3e-25	1	1
ENSCCAP00000030010	RRM_1	PF00076.22	2.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000047750	CSTF2-201	2091	XM_017505863	ENSCCAP00000030010	597 (aa)	XP_017361352	A0A2K5RPD6
ENSCCAT00000047792	CSTF2-204	1659	-	ENSCCAP00000030052	552 (aa)	-	A0A2K5RPI6
ENSCCAT00000047785	CSTF2-203	1779	XM_017505864	ENSCCAP00000030045	592 (aa)	XP_017361353	A0A2K5RPG9
ENSCCAT00000047756	CSTF2-202	2015	XM_017505865	ENSCCAP00000030016	577 (aa)	XP_017361354	A0A2K5RPH1

Gene Model

Click here to download ENSCCAG00000032975's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000032975's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000032975	CSTF2	56	65.672	ENSCCAG00000020816	-	88	66.269

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000032975	CSTF2	100	98.995	ENSG00000101811	CSTF2	100	98.995	Homo_sapiens
ENSCCAG00000032975	CSTF2	99	61.102	ENSAPOG00000005630	cstf2	97	61.307	Acanthochromis_polyacanthus
ENSCCAG00000032975	CSTF2	100	95.033	ENSAMEG00000002082	CSTF2	100	95.033	Ailuropoda_melanoleuca
ENSCCAG00000032975	CSTF2	87	82.231	ENSACIG00000012852	cstf2	96	59.605	Amphilophus_citrinellus
ENSCCAG00000032975	CSTF2	99	60.391	ENSAOCG00000020905	cstf2	97	61.484	Amphiprion_ocellaris
ENSCCAG00000032975	CSTF2	99	60.391	ENSAPEG00000006526	cstf2	97	61.484	Amphiprion_percula
ENSCCAG00000032975	CSTF2	84	80.247	ENSATEG00000018186	cstf2	96	59.571	Anabas_testudineus
ENSCCAG00000032975	CSTF2	97	78.596	ENSAPLG00000007255	CSTF2	98	78.136	Anas_platyrhynchos
ENSCCAG00000032975	CSTF2	100	99.653	ENSANAG00000022342	CSTF2	100	99.653	Aotus_nancymaae
ENSCCAG00000032975	CSTF2	99	58.478	ENSACLG00000000779	cstf2	93	62.007	Astatotilapia_calliptera
ENSCCAG00000032975	CSTF2	81	93.548	ENSAMXG00000021477	cstf2	96	98.413	Astyanax_mexicanus
ENSCCAG00000032975	CSTF2	100	95.101	ENSBTAG00000003547	CSTF2	100	95.101	Bos_taurus
ENSCCAG00000032975	CSTF2	100	100.000	ENSCJAG00000004422	CSTF2	100	100.000	Callithrix_jacchus
ENSCCAG00000032975	CSTF2	100	95.494	ENSCAFG00000017551	CSTF2	100	95.494	Canis_familiaris
ENSCCAG00000032975	CSTF2	100	95.645	ENSCAFG00020007619	CSTF2	100	95.645	Canis_lupus_dingo
ENSCCAG00000032975	CSTF2	100	95.439	ENSCHIG00000016994	CSTF2	100	95.439	Capra_hircus
ENSCCAG00000032975	CSTF2	100	97.822	ENSTSYG00000006529	CSTF2	100	97.822	Carlito_syrichta
ENSCCAG00000032975	CSTF2	100	95.310	ENSCPOG00000015255	CSTF2	100	95.310	Cavia_porcellus
ENSCCAG00000032975	CSTF2	100	98.913	ENSCATG00000022835	CSTF2	100	98.913	Cercocebus_atys
ENSCCAG00000032975	CSTF2	100	95.310	ENSCLAG00000001904	CSTF2	100	95.310	Chinchilla_lanigera
ENSCCAG00000032975	CSTF2	100	98.827	ENSCSAG00000010360	CSTF2	100	98.827	Chlorocebus_sabaeus
ENSCCAG00000032975	CSTF2	70	100.000	ENSCHOG00000012803	CSTF2	75	100.000	Choloepus_hoffmanni
ENSCCAG00000032975	CSTF2	100	76.361	ENSCPBG00000014293	CSTF2	100	76.117	Chrysemys_picta_bellii
ENSCCAG00000032975	CSTF2	100	99.094	ENSCANG00000030612	CSTF2	100	99.094	Colobus_angolensis_palliatus
ENSCCAG00000032975	CSTF2	100	92.069	ENSCGRG00001023023	Cstf2	100	92.069	Cricetulus_griseus_chok1gshd
ENSCCAG00000032975	CSTF2	100	88.966	ENSCGRG00000003897	Cstf2	100	88.966	Cricetulus_griseus_crigri
ENSCCAG00000032975	CSTF2	99	61.939	ENSCVAG00000005731	cstf2	96	62.100	Cyprinodon_variegatus
ENSCCAG00000032975	CSTF2	72	98.182	ENSDARG00000090788	cstf2	93	92.188	Danio_rerio
ENSCCAG00000032975	CSTF2	100	92.228	ENSDORG00000007195	Cstf2	100	92.228	Dipodomys_ordii
ENSCCAG00000032975	CSTF2	74	93.243	ENSETEG00000004931	CSTF2	68	93.243	Echinops_telfairi
ENSCCAG00000032975	CSTF2	100	96.315	ENSEASG00005001216	CSTF2	100	96.315	Equus_asinus_asinus
ENSCCAG00000032975	CSTF2	100	96.315	ENSECAG00000009325	CSTF2	100	96.315	Equus_caballus
ENSCCAG00000032975	CSTF2	100	96.147	ENSFCAG00000007000	CSTF2	100	96.147	Felis_catus
ENSCCAG00000032975	CSTF2	92	77.305	ENSFALG00000003859	CSTF2	100	77.482	Ficedula_albicollis
ENSCCAG00000032975	CSTF2	100	96.187	ENSFDAG00000002416	CSTF2	100	96.187	Fukomys_damarensis
ENSCCAG00000032975	CSTF2	87	81.148	ENSFHEG00000017065	cstf2	93	62.500	Fundulus_heteroclitus
ENSCCAG00000032975	CSTF2	83	77.966	ENSGMOG00000005145	cstf2	99	58.824	Gadus_morhua
ENSCCAG00000032975	CSTF2	100	78.498	ENSGALG00000006760	CSTF2	100	84.667	Gallus_gallus
ENSCCAG00000032975	CSTF2	99	59.928	ENSGAFG00000020027	cstf2	96	61.279	Gambusia_affinis
ENSCCAG00000032975	CSTF2	99	56.055	ENSGACG00000017326	cstf2	94	81.633	Gasterosteus_aculeatus
ENSCCAG00000032975	CSTF2	100	78.309	ENSGAGG00000006037	CSTF2	100	78.788	Gopherus_agassizii
ENSCCAG00000032975	CSTF2	100	99.275	ENSGGOG00000022267	CSTF2	100	99.275	Gorilla_gorilla
ENSCCAG00000032975	CSTF2	99	58.406	ENSHBUG00000016183	cstf2	93	61.939	Haplochromis_burtoni
ENSCCAG00000032975	CSTF2	100	96.187	ENSHGLG00000000659	-	100	96.187	Heterocephalus_glaber_female
ENSCCAG00000032975	CSTF2	100	81.802	ENSHGLG00000013455	-	100	81.802	Heterocephalus_glaber_female
ENSCCAG00000032975	CSTF2	100	81.976	ENSHGLG00100015391	-	100	81.976	Heterocephalus_glaber_male
ENSCCAG00000032975	CSTF2	100	96.187	ENSHGLG00100001130	-	100	96.187	Heterocephalus_glaber_male
ENSCCAG00000032975	CSTF2	99	62.433	ENSHCOG00000005157	cstf2	97	62.970	Hippocampus_comes
ENSCCAG00000032975	CSTF2	100	59.967	ENSIPUG00000017839	cstf2	99	60.891	Ictalurus_punctatus
ENSCCAG00000032975	CSTF2	100	95.147	ENSSTOG00000023445	CSTF2	100	95.147	Ictidomys_tridecemlineatus
ENSCCAG00000032975	CSTF2	100	93.761	ENSJJAG00000020507	Cstf2	100	93.761	Jaculus_jaculus
ENSCCAG00000032975	CSTF2	99	58.984	ENSKMAG00000001068	cstf2	96	61.957	Kryptolebias_marmoratus
ENSCCAG00000032975	CSTF2	63	94.915	ENSLBEG00000028720	cstf2	87	89.062	Labrus_bergylta
ENSCCAG00000032975	CSTF2	99	68.699	ENSLACG00000015927	CSTF2	99	67.647	Latimeria_chalumnae
ENSCCAG00000032975	CSTF2	98	77.778	ENSLOCG00000015300	cstf2	93	64.164	Lepisosteus_oculatus
ENSCCAG00000032975	CSTF2	100	91.625	ENSLAFG00000000474	CSTF2	100	91.625	Loxodonta_africana
ENSCCAG00000032975	CSTF2	100	99.094	ENSMFAG00000043888	CSTF2	100	99.094	Macaca_fascicularis
ENSCCAG00000032975	CSTF2	100	99.094	ENSMMUG00000013008	CSTF2	100	99.094	Macaca_mulatta
ENSCCAG00000032975	CSTF2	100	99.094	ENSMNEG00000041824	CSTF2	100	99.094	Macaca_nemestrina
ENSCCAG00000032975	CSTF2	100	99.094	ENSMLEG00000036870	CSTF2	100	99.094	Mandrillus_leucophaeus
ENSCCAG00000032975	CSTF2	97	57.982	ENSMAMG00000020364	cstf2	96	59.781	Mastacembelus_armatus
ENSCCAG00000032975	CSTF2	99	58.478	ENSMZEG00005007200	cstf2	96	62.007	Maylandia_zebra
ENSCCAG00000032975	CSTF2	93	68.885	ENSMGAG00000004139	CSTF2	100	84.064	Meleagris_gallopavo
ENSCCAG00000032975	CSTF2	100	92.414	ENSMAUG00000000965	Cstf2	100	92.414	Mesocricetus_auratus
ENSCCAG00000032975	CSTF2	100	96.315	ENSMICG00000014121	CSTF2	100	96.315	Microcebus_murinus
ENSCCAG00000032975	CSTF2	100	91.034	ENSMOCG00000008081	Cstf2	100	91.034	Microtus_ochrogaster
ENSCCAG00000032975	CSTF2	84	92.308	ENSMMOG00000000538	cstf2	97	55.615	Mola_mola
ENSCCAG00000032975	CSTF2	100	80.233	ENSMODG00000011785	CSTF2	100	81.864	Monodelphis_domestica
ENSCCAG00000032975	CSTF2	100	92.414	MGP_CAROLIEiJ_G0033383	Cstf2	100	92.414	Mus_caroli
ENSCCAG00000032975	CSTF2	100	92.414	ENSMUSG00000031256	Cstf2	100	92.414	Mus_musculus
ENSCCAG00000032975	CSTF2	100	92.401	MGP_PahariEiJ_G0031923	Cstf2	100	92.573	Mus_pahari
ENSCCAG00000032975	CSTF2	100	92.414	MGP_SPRETEiJ_G0034548	Cstf2	100	92.414	Mus_spretus
ENSCCAG00000032975	CSTF2	100	90.317	ENSMPUG00000002339	CSTF2	100	90.317	Mustela_putorius_furo
ENSCCAG00000032975	CSTF2	100	88.712	ENSMLUG00000004598	CSTF2	98	88.712	Myotis_lucifugus
ENSCCAG00000032975	CSTF2	100	94.301	ENSNGAG00000021985	Cstf2	100	94.473	Nannospalax_galili
ENSCCAG00000032975	CSTF2	92	60.097	ENSNBRG00000021694	cstf2	100	57.914	Neolamprologus_brichardi
ENSCCAG00000032975	CSTF2	100	99.094	ENSNLEG00000007510	CSTF2	100	99.094	Nomascus_leucogenys
ENSCCAG00000032975	CSTF2	100	77.643	ENSMEUG00000007875	-	100	78.856	Notamacropus_eugenii
ENSCCAG00000032975	CSTF2	100	81.456	ENSMEUG00000011186	-	100	83.362	Notamacropus_eugenii
ENSCCAG00000032975	CSTF2	91	79.278	ENSMEUG00000014025	-	100	80.798	Notamacropus_eugenii
ENSCCAG00000032975	CSTF2	90	80.995	ENSOPRG00000003106	CSTF2	87	80.995	Ochotona_princeps
ENSCCAG00000032975	CSTF2	100	94.801	ENSODEG00000002059	CSTF2	100	94.801	Octodon_degus
ENSCCAG00000032975	CSTF2	93	79.600	ENSONIG00000002631	cstf2	87	75.812	Oreochromis_niloticus
ENSCCAG00000032975	CSTF2	87	98.214	ENSOANG00000004208	CSTF2	87	90.000	Ornithorhynchus_anatinus
ENSCCAG00000032975	CSTF2	100	94.801	ENSOCUG00000010468	CSTF2	100	94.801	Oryctolagus_cuniculus
ENSCCAG00000032975	CSTF2	86	80.498	ENSORLG00000001380	cstf2	97	59.002	Oryzias_latipes
ENSCCAG00000032975	CSTF2	86	80.913	ENSORLG00020021917	cstf2	97	59.358	Oryzias_latipes_hni
ENSCCAG00000032975	CSTF2	86	80.498	ENSORLG00015011996	cstf2	97	59.002	Oryzias_latipes_hsok
ENSCCAG00000032975	CSTF2	99	58.362	ENSOMEG00000015507	cstf2	97	60.142	Oryzias_melastigma
ENSCCAG00000032975	CSTF2	100	90.779	ENSOGAG00000011192	CSTF2	100	89.825	Otolemur_garnettii
ENSCCAG00000032975	CSTF2	100	95.118	ENSOARG00000001022	CSTF2	100	95.118	Ovis_aries
ENSCCAG00000032975	CSTF2	100	99.275	ENSPPAG00000031804	CSTF2	100	99.275	Pan_paniscus
ENSCCAG00000032975	CSTF2	100	96.315	ENSPPRG00000022492	CSTF2	100	96.315	Panthera_pardus
ENSCCAG00000032975	CSTF2	100	95.980	ENSPTIG00000009922	CSTF2	100	95.980	Panthera_tigris_altaica
ENSCCAG00000032975	CSTF2	100	99.275	ENSPTRG00000022090	CSTF2	100	99.275	Pan_troglodytes
ENSCCAG00000032975	CSTF2	100	99.094	ENSPANG00000002303	CSTF2	100	99.094	Papio_anubis
ENSCCAG00000032975	CSTF2	99	62.857	ENSPKIG00000005033	cstf2	97	60.727	Paramormyrops_kingsleyae
ENSCCAG00000032975	CSTF2	99	58.392	ENSPMGG00000006534	cstf2	97	58.854	Periophthalmus_magnuspinnatus
ENSCCAG00000032975	CSTF2	100	91.379	ENSPEMG00000019415	Cstf2	100	91.379	Peromyscus_maniculatus_bairdii
ENSCCAG00000032975	CSTF2	100	81.291	ENSPCIG00000002989	CSTF2	100	82.266	Phascolarctos_cinereus
ENSCCAG00000032975	CSTF2	99	56.993	ENSPLAG00000011176	cstf2	96	59.549	Poecilia_latipinna
ENSCCAG00000032975	CSTF2	99	56.993	ENSPMEG00000017743	cstf2	96	59.201	Poecilia_mexicana
ENSCCAG00000032975	CSTF2	58	71.429	ENSPREG00000011481	cstf2	97	59.792	Poecilia_reticulata
ENSCCAG00000032975	CSTF2	100	98.995	ENSPPYG00000020541	CSTF2	100	98.995	Pongo_abelii
ENSCCAG00000032975	CSTF2	100	97.645	ENSPCOG00000027744	CSTF2	100	97.645	Propithecus_coquereli
ENSCCAG00000032975	CSTF2	97	80.610	ENSPVAG00000008342	CSTF2	100	80.610	Pteropus_vampyrus
ENSCCAG00000032975	CSTF2	59	91.781	ENSPNYG00000010852	cstf2	94	91.781	Pundamilia_nyererei
ENSCCAG00000032975	CSTF2	99	61.214	ENSPNAG00000018887	cstf2	97	62.144	Pygocentrus_nattereri
ENSCCAG00000032975	CSTF2	100	91.897	ENSRNOG00000048025	Cstf2	100	91.897	Rattus_norvegicus
ENSCCAG00000032975	CSTF2	100	97.283	ENSRBIG00000030745	CSTF2	100	97.283	Rhinopithecus_bieti
ENSCCAG00000032975	CSTF2	100	99.094	ENSRROG00000045042	CSTF2	100	99.094	Rhinopithecus_roxellana
ENSCCAG00000032975	CSTF2	100	99.819	ENSSBOG00000021649	CSTF2	100	99.819	Saimiri_boliviensis_boliviensis
ENSCCAG00000032975	CSTF2	98	100.000	ENSSHAG00000003681	CSTF2	92	83.160	Sarcophilus_harrisii
ENSCCAG00000032975	CSTF2	99	63.787	ENSSFOG00015006348	cstf2	98	63.727	Scleropages_formosus
ENSCCAG00000032975	CSTF2	99	57.143	ENSSMAG00000013463	cstf2	97	59.337	Scophthalmus_maximus
ENSCCAG00000032975	CSTF2	100	64.955	ENSSPUG00000005288	-	99	80.085	Sphenodon_punctatus
ENSCCAG00000032975	CSTF2	100	95.142	ENSSSCG00000012486	CSTF2	100	96.296	Sus_scrofa
ENSCCAG00000032975	CSTF2	100	78.912	ENSTGUG00000002253	CSTF2	100	79.082	Taeniopygia_guttata
ENSCCAG00000032975	CSTF2	99	59.201	ENSTNIG00000016860	cstf2	99	59.337	Tetraodon_nigroviridis
ENSCCAG00000032975	CSTF2	55	100.000	ENSTBEG00000010029	-	69	100.000	Tupaia_belangeri
ENSCCAG00000032975	CSTF2	100	96.360	ENSTTRG00000013556	CSTF2	100	96.360	Tursiops_truncatus
ENSCCAG00000032975	CSTF2	100	95.515	ENSUAMG00000026605	CSTF2	100	95.515	Ursus_americanus
ENSCCAG00000032975	CSTF2	100	89.189	ENSUMAG00000012417	CSTF2	100	96.886	Ursus_maritimus
ENSCCAG00000032975	CSTF2	73	95.627	ENSVPAG00000006466	CSTF2	72	95.627	Vicugna_pacos
ENSCCAG00000032975	CSTF2	100	95.667	ENSVVUG00000004717	CSTF2	100	95.667	Vulpes_vulpes
ENSCCAG00000032975	CSTF2	82	92.188	ENSXETG00000009642	cstf2	100	65.812	Xenopus_tropicalis
ENSCCAG00000032975	CSTF2	88	76.829	ENSXCOG00000016436	cstf2	84	96.970	Xiphophorus_couchianus
ENSCCAG00000032975	CSTF2	58	71.171	ENSXMAG00000013524	cstf2	97	57.426	Xiphophorus_maculatus