EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000033056 (Gene tree)
Gene ID: 108311931
Gene Symbol: -
Alias: -
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 6654 bases
Position: chrKV389545.1:5583306-5589959
Accession: 108311931
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000030032	Exo_endo_phos	PF03372.23	4.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000047775	-	45	-	ENSCCAP00000030036	14 (aa)	-	A0A2K5RPI9
ENSCCAT00000047772	-	5173	XM_017539591	ENSCCAP00000030032	318 (aa)	XP_017395080	A0A2K5RPG8

Gene Model

Click here to download ENSCCAG00000033056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000033056's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000033056	-	100	85.849	ENSCCAG00000031931	-	100	85.849

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000033056	-	100	98.428	ENSG00000100823	APEX1	100	98.428	Homo_sapiens
ENSCCAG00000033056	-	88	69.892	ENSAPOG00000017002	apex1	91	69.892	Acanthochromis_polyacanthus
ENSCCAG00000033056	-	100	96.541	ENSAMEG00000005418	APEX1	100	96.541	Ailuropoda_melanoleuca
ENSCCAG00000033056	-	87	71.583	ENSACIG00000010653	apex1	94	71.685	Amphilophus_citrinellus
ENSCCAG00000033056	-	88	69.892	ENSAOCG00000009649	apex1	90	69.892	Amphiprion_ocellaris
ENSCCAG00000033056	-	88	69.892	ENSAPEG00000021453	apex1	90	69.892	Amphiprion_percula
ENSCCAG00000033056	-	99	67.405	ENSATEG00000002883	apex1	97	67.405	Anabas_testudineus
ENSCCAG00000033056	-	100	70.497	ENSACAG00000008099	APEX1	100	70.497	Anolis_carolinensis
ENSCCAG00000033056	-	100	99.371	ENSANAG00000030117	APEX1	100	99.371	Aotus_nancymaae
ENSCCAG00000033056	-	86	72.364	ENSACLG00000018441	apex1	99	67.089	Astatotilapia_calliptera
ENSCCAG00000033056	-	100	65.938	ENSAMXG00000034699	apex1	100	65.938	Astyanax_mexicanus
ENSCCAG00000033056	-	100	94.654	ENSBTAG00000002745	APEX1	100	94.654	Bos_taurus
ENSCCAG00000033056	-	80	44.922	WBGene00001372	exo-3	88	44.922	Caenorhabditis_elegans
ENSCCAG00000033056	-	100	100.000	ENSCJAG00000009726	APEX1	100	100.000	Callithrix_jacchus
ENSCCAG00000033056	-	100	96.541	ENSCAFG00000032033	APEX1	100	96.541	Canis_familiaris
ENSCCAG00000033056	-	54	93.605	ENSCAFG00020023002	-	96	93.605	Canis_lupus_dingo
ENSCCAG00000033056	-	100	96.541	ENSCAFG00020014377	-	100	96.541	Canis_lupus_dingo
ENSCCAG00000033056	-	100	94.654	ENSCHIG00000007298	-	100	94.654	Capra_hircus
ENSCCAG00000033056	-	98	75.641	ENSCHIG00000014537	-	99	75.641	Capra_hircus
ENSCCAG00000033056	-	100	95.597	ENSTSYG00000034813	APEX1	100	95.597	Carlito_syrichta
ENSCCAG00000033056	-	85	88.930	ENSCAPG00000016235	APEX1	91	97.881	Cavia_aperea
ENSCCAG00000033056	-	100	95.283	ENSCPOG00000030909	APEX1	100	95.283	Cavia_porcellus
ENSCCAG00000033056	-	100	98.113	ENSCATG00000015580	APEX1	100	98.113	Cercocebus_atys
ENSCCAG00000033056	-	100	95.283	ENSCLAG00000001002	APEX1	100	95.283	Chinchilla_lanigera
ENSCCAG00000033056	-	100	97.799	ENSCSAG00000016670	-	100	97.799	Chlorocebus_sabaeus
ENSCCAG00000033056	-	100	97.799	ENSCSAG00000016685	-	100	97.799	Chlorocebus_sabaeus
ENSCCAG00000033056	-	100	72.100	ENSCPBG00000009567	APEX1	100	72.100	Chrysemys_picta_bellii
ENSCCAG00000033056	-	93	53.465	ENSCING00000008137	-	84	58.113	Ciona_intestinalis
ENSCCAG00000033056	-	83	51.698	ENSCSAVG00000007144	-	100	52.510	Ciona_savignyi
ENSCCAG00000033056	-	100	98.113	ENSCANG00000030726	APEX1	100	98.113	Colobus_angolensis_palliatus
ENSCCAG00000033056	-	100	92.453	ENSCGRG00001017046	Apex1	100	92.453	Cricetulus_griseus_chok1gshd
ENSCCAG00000033056	-	100	92.453	ENSCGRG00000008984	Apex1	100	92.453	Cricetulus_griseus_crigri
ENSCCAG00000033056	-	99	65.094	ENSCSEG00000017499	apex1	99	65.094	Cynoglossus_semilaevis
ENSCCAG00000033056	-	99	66.772	ENSCVAG00000022075	apex1	99	66.772	Cyprinodon_variegatus
ENSCCAG00000033056	-	100	66.981	ENSDARG00000045843	apex1	100	66.667	Danio_rerio
ENSCCAG00000033056	-	100	90.252	ENSDNOG00000042234	APEX1	95	90.252	Dasypus_novemcinctus
ENSCCAG00000033056	-	100	95.283	ENSDORG00000001616	Apex1	100	95.283	Dipodomys_ordii
ENSCCAG00000033056	-	100	94.654	ENSETEG00000004855	-	100	94.654	Echinops_telfairi
ENSCCAG00000033056	-	75	65.272	ENSEBUG00000000622	-	92	65.272	Eptatretus_burgeri
ENSCCAG00000033056	-	100	97.170	ENSEASG00005017489	APEX1	74	97.170	Equus_asinus_asinus
ENSCCAG00000033056	-	100	97.170	ENSECAG00000022325	APEX1	82	97.170	Equus_caballus
ENSCCAG00000033056	-	91	93.750	ENSEEUG00000012569	APEX1	100	93.750	Erinaceus_europaeus
ENSCCAG00000033056	-	100	65.723	ENSELUG00000021706	apex1	100	65.723	Esox_lucius
ENSCCAG00000033056	-	100	97.170	ENSFCAG00000030869	APEX1	100	97.170	Felis_catus
ENSCCAG00000033056	-	100	94.340	ENSFDAG00000006120	APEX1	100	94.340	Fukomys_damarensis
ENSCCAG00000033056	-	99	68.354	ENSFHEG00000009031	apex1	83	68.354	Fundulus_heteroclitus
ENSCCAG00000033056	-	99	61.950	ENSGMOG00000007943	apex1	99	61.442	Gadus_morhua
ENSCCAG00000033056	-	88	72.401	ENSGAFG00000005311	apex1	99	67.405	Gambusia_affinis
ENSCCAG00000033056	-	99	65.823	ENSGACG00000019497	apex1	99	69.925	Gasterosteus_aculeatus
ENSCCAG00000033056	-	100	71.787	ENSGAGG00000014999	APEX1	100	71.787	Gopherus_agassizii
ENSCCAG00000033056	-	100	98.742	ENSGGOG00000002128	APEX1	100	98.742	Gorilla_gorilla
ENSCCAG00000033056	-	99	66.456	ENSHBUG00000005894	apex1	99	66.772	Haplochromis_burtoni
ENSCCAG00000033056	-	100	95.283	ENSHGLG00000002848	APEX1	100	95.283	Heterocephalus_glaber_female
ENSCCAG00000033056	-	100	95.283	ENSHGLG00100017878	APEX1	100	95.283	Heterocephalus_glaber_male
ENSCCAG00000033056	-	99	66.352	ENSHCOG00000009961	apex1	89	70.968	Hippocampus_comes
ENSCCAG00000033056	-	100	68.025	ENSIPUG00000005799	apex1	100	67.712	Ictalurus_punctatus
ENSCCAG00000033056	-	100	94.340	ENSSTOG00000010096	APEX1	100	94.340	Ictidomys_tridecemlineatus
ENSCCAG00000033056	-	100	84.906	ENSJJAG00000003660	-	100	84.906	Jaculus_jaculus
ENSCCAG00000033056	-	100	80.818	ENSJJAG00000020465	-	96	84.899	Jaculus_jaculus
ENSCCAG00000033056	-	100	94.654	ENSJJAG00000012067	-	100	94.654	Jaculus_jaculus
ENSCCAG00000033056	-	99	66.772	ENSKMAG00000021171	apex1	99	66.772	Kryptolebias_marmoratus
ENSCCAG00000033056	-	88	68.817	ENSLBEG00000010248	apex1	99	64.537	Labrus_bergylta
ENSCCAG00000033056	-	100	67.913	ENSLACG00000008617	APEX1	100	67.296	Latimeria_chalumnae
ENSCCAG00000033056	-	100	67.391	ENSLOCG00000015516	apex1	99	66.355	Lepisosteus_oculatus
ENSCCAG00000033056	-	100	94.969	ENSLAFG00000021872	APEX1	100	94.969	Loxodonta_africana
ENSCCAG00000033056	-	100	97.484	ENSMFAG00000002565	APEX1	100	97.484	Macaca_fascicularis
ENSCCAG00000033056	-	100	97.799	ENSMMUG00000048039	APEX1	100	97.799	Macaca_mulatta
ENSCCAG00000033056	-	100	97.799	ENSMNEG00000036944	APEX1	100	97.799	Macaca_nemestrina
ENSCCAG00000033056	-	100	98.113	ENSMLEG00000042125	APEX1	100	98.113	Mandrillus_leucophaeus
ENSCCAG00000033056	-	99	67.089	ENSMAMG00000023526	apex1	99	67.089	Mastacembelus_armatus
ENSCCAG00000033056	-	86	72.364	ENSMZEG00005014187	apex1	99	67.089	Maylandia_zebra
ENSCCAG00000033056	-	100	93.082	ENSMAUG00000013994	Apex1	100	93.082	Mesocricetus_auratus
ENSCCAG00000033056	-	100	96.226	ENSMICG00000043554	APEX1	100	96.226	Microcebus_murinus
ENSCCAG00000033056	-	100	93.396	ENSMOCG00000013721	Apex1	100	93.396	Microtus_ochrogaster
ENSCCAG00000033056	-	88	67.857	ENSMMOG00000010031	apex1	87	67.857	Mola_mola
ENSCCAG00000033056	-	100	84.062	ENSMODG00000007125	APEX1	100	84.375	Monodelphis_domestica
ENSCCAG00000033056	-	88	64.516	ENSMALG00000011699	apex1	75	64.516	Monopterus_albus
ENSCCAG00000033056	-	99	94.953	MGP_CAROLIEiJ_G0019209	Apex1	99	94.953	Mus_caroli
ENSCCAG00000033056	-	100	95.597	ENSMUSG00000035960	Apex1	100	95.597	Mus_musculus
ENSCCAG00000033056	-	100	95.597	MGP_PahariEiJ_G0030232	Apex1	100	95.597	Mus_pahari
ENSCCAG00000033056	-	100	95.597	MGP_SPRETEiJ_G0020101	Apex1	100	95.597	Mus_spretus
ENSCCAG00000033056	-	100	95.000	ENSMLUG00000028957	APEX1	100	95.000	Myotis_lucifugus
ENSCCAG00000033056	-	100	70.440	ENSNGAG00000021748	-	99	70.440	Nannospalax_galili
ENSCCAG00000033056	-	100	93.711	ENSNGAG00000002725	-	100	93.711	Nannospalax_galili
ENSCCAG00000033056	-	86	72.000	ENSNBRG00000005334	apex1	91	66.772	Neolamprologus_brichardi
ENSCCAG00000033056	-	100	98.113	ENSNLEG00000010839	APEX1	100	98.113	Nomascus_leucogenys
ENSCCAG00000033056	-	100	87.107	ENSMEUG00000014519	APEX1	100	85.893	Notamacropus_eugenii
ENSCCAG00000033056	-	100	94.340	ENSOPRG00000014029	APEX1	100	94.025	Ochotona_princeps
ENSCCAG00000033056	-	100	72.531	ENSODEG00000006583	-	100	72.531	Octodon_degus
ENSCCAG00000033056	-	97	75.728	ENSODEG00000004777	-	99	75.728	Octodon_degus
ENSCCAG00000033056	-	100	95.597	ENSODEG00000001703	-	100	95.597	Octodon_degus
ENSCCAG00000033056	-	87	72.302	ENSONIG00000012089	apex1	99	67.405	Oreochromis_niloticus
ENSCCAG00000033056	-	90	83.158	ENSOANG00000008836	APEX1	80	77.778	Ornithorhynchus_anatinus
ENSCCAG00000033056	-	100	96.226	ENSOCUG00000005022	APEX1	100	96.226	Oryctolagus_cuniculus
ENSCCAG00000033056	-	99	67.296	ENSORLG00000012378	apex1	99	66.981	Oryzias_latipes
ENSCCAG00000033056	-	99	67.296	ENSORLG00020021371	apex1	99	66.981	Oryzias_latipes_hni
ENSCCAG00000033056	-	99	67.296	ENSORLG00015020089	apex1	99	66.981	Oryzias_latipes_hsok
ENSCCAG00000033056	-	99	67.296	ENSOMEG00000018876	apex1	99	67.296	Oryzias_melastigma
ENSCCAG00000033056	-	98	84.615	ENSOGAG00000029355	-	100	84.615	Otolemur_garnettii
ENSCCAG00000033056	-	100	95.283	ENSOGAG00000013335	-	100	95.283	Otolemur_garnettii
ENSCCAG00000033056	-	97	90.260	ENSOARG00000001876	-	100	90.260	Ovis_aries
ENSCCAG00000033056	-	99	79.114	ENSOARG00000014424	-	100	79.114	Ovis_aries
ENSCCAG00000033056	-	100	93.711	ENSOARG00000019740	-	100	93.711	Ovis_aries
ENSCCAG00000033056	-	100	98.742	ENSPPAG00000038760	APEX1	100	98.742	Pan_paniscus
ENSCCAG00000033056	-	100	97.484	ENSPPRG00000011794	APEX1	100	97.484	Panthera_pardus
ENSCCAG00000033056	-	100	97.170	ENSPTIG00000014829	APEX1	100	97.170	Panthera_tigris_altaica
ENSCCAG00000033056	-	100	98.742	ENSPTRG00000006093	APEX1	100	98.742	Pan_troglodytes
ENSCCAG00000033056	-	100	98.113	ENSPANG00000022757	APEX1	100	98.113	Papio_anubis
ENSCCAG00000033056	-	87	69.314	ENSPKIG00000003504	apex1	100	64.798	Paramormyrops_kingsleyae
ENSCCAG00000033056	-	76	67.078	ENSPMGG00000016596	apex1	73	67.078	Periophthalmus_magnuspinnatus
ENSCCAG00000033056	-	100	94.969	ENSPEMG00000019097	Apex1	100	94.969	Peromyscus_maniculatus_bairdii
ENSCCAG00000033056	-	94	66.667	ENSPMAG00000007275	-	95	69.039	Petromyzon_marinus
ENSCCAG00000033056	-	100	84.326	ENSPCIG00000023274	APEX1	100	84.424	Phascolarctos_cinereus
ENSCCAG00000033056	-	88	72.760	ENSPFOG00000004178	apex1	90	72.760	Poecilia_formosa
ENSCCAG00000033056	-	88	72.401	ENSPLAG00000012779	apex1	90	72.401	Poecilia_latipinna
ENSCCAG00000033056	-	88	72.760	ENSPMEG00000019623	apex1	90	72.760	Poecilia_mexicana
ENSCCAG00000033056	-	88	72.043	ENSPREG00000014298	apex1	89	72.043	Poecilia_reticulata
ENSCCAG00000033056	-	100	98.113	ENSPPYG00000005565	APEX1	100	98.113	Pongo_abelii
ENSCCAG00000033056	-	100	93.082	ENSPCAG00000010376	APEX1	100	93.082	Procavia_capensis
ENSCCAG00000033056	-	100	96.226	ENSPCOG00000021564	APEX1	100	96.226	Propithecus_coquereli
ENSCCAG00000033056	-	100	95.938	ENSPVAG00000010736	APEX1	100	95.938	Pteropus_vampyrus
ENSCCAG00000033056	-	86	72.364	ENSPNYG00000023940	apex1	99	67.089	Pundamilia_nyererei
ENSCCAG00000033056	-	93	65.878	ENSPNAG00000020897	apex1	96	65.763	Pygocentrus_nattereri
ENSCCAG00000033056	-	100	94.654	ENSRNOG00000009663	Apex1	100	94.654	Rattus_norvegicus
ENSCCAG00000033056	-	100	98.113	ENSRBIG00000038325	APEX1	99	98.113	Rhinopithecus_bieti
ENSCCAG00000033056	-	100	83.962	ENSSBOG00000031372	-	100	83.810	Saimiri_boliviensis_boliviensis
ENSCCAG00000033056	-	100	99.686	ENSSBOG00000018921	-	100	99.686	Saimiri_boliviensis_boliviensis
ENSCCAG00000033056	-	100	84.259	ENSSHAG00000013524	APEX1	100	84.259	Sarcophilus_harrisii
ENSCCAG00000033056	-	100	63.208	ENSSFOG00015001948	apex1	100	62.579	Scleropages_formosus
ENSCCAG00000033056	-	87	70.144	ENSSMAG00000013348	apex1	99	66.246	Scophthalmus_maximus
ENSCCAG00000033056	-	99	65.823	ENSSDUG00000016377	apex1	99	65.823	Seriola_dumerili
ENSCCAG00000033056	-	99	66.456	ENSSLDG00000023005	apex1	99	66.456	Seriola_lalandi_dorsalis
ENSCCAG00000033056	-	89	73.239	ENSSPUG00000000531	APEX1	96	73.239	Sphenodon_punctatus
ENSCCAG00000033056	-	99	65.506	ENSSPAG00000000458	apex1	99	65.506	Stegastes_partitus
ENSCCAG00000033056	-	96	56.452	ENSSSCG00000039705	-	92	59.859	Sus_scrofa
ENSCCAG00000033056	-	100	95.283	ENSSSCG00000040060	-	100	95.283	Sus_scrofa
ENSCCAG00000033056	-	74	61.017	ENSTGUG00000014378	APEX1	100	61.017	Taeniopygia_guttata
ENSCCAG00000033056	-	87	68.345	ENSTRUG00000004268	apex1	95	64.241	Takifugu_rubripes
ENSCCAG00000033056	-	99	64.241	ENSTNIG00000005778	apex1	99	64.241	Tetraodon_nigroviridis
ENSCCAG00000033056	-	100	92.138	ENSTBEG00000006405	APEX1	100	92.138	Tupaia_belangeri
ENSCCAG00000033056	-	74	95.763	ENSTTRG00000007860	APEX1	100	95.763	Tursiops_truncatus
ENSCCAG00000033056	-	100	96.226	ENSUAMG00000010457	APEX1	100	96.226	Ursus_americanus
ENSCCAG00000033056	-	100	96.226	ENSUMAG00000009178	APEX1	100	96.226	Ursus_maritimus
ENSCCAG00000033056	-	74	91.102	ENSVPAG00000005083	APEX1	100	91.102	Vicugna_pacos
ENSCCAG00000033056	-	100	95.912	ENSVVUG00000009010	APEX1	100	95.912	Vulpes_vulpes
ENSCCAG00000033056	-	100	66.771	ENSXETG00000024773	apex1	100	66.771	Xenopus_tropicalis
ENSCCAG00000033056	-	88	72.401	ENSXCOG00000015233	apex1	99	67.722	Xiphophorus_couchianus
ENSCCAG00000033056	-	100	67.296	ENSXMAG00000006195	apex1	99	67.722	Xiphophorus_maculatus