EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000033206 (Gene tree)
Gene ID: 108314980
Gene Symbol: HFM1
Alias: FLJ36760|FLJ39011|MER3|SEC63D1
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 116914 bases
Position: chrKV389592.1:1281859-1398772
Accession: 108314980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000030351	ResIII	PF04851.15	2.1e-11	1	1
ENSCCAP00000030351	DEAD	PF00270.29	1.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000048094	HFM1-201	4302	XM_017544128	ENSCCAP00000030351	1433 (aa)	XP_017399617	A0A2K5RQE6

Gene Model

Click here to download ENSCCAG00000033206's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000033206's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000033206	HFM1	58	31.824	ENSCCAG00000033962	SNRNP200	75	31.824
ENSCCAG00000033206	HFM1	52	35.075	ENSCCAG00000024230	ASCC3	62	35.075

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000033206	HFM1	100	93.798	ENSG00000162669	HFM1	100	93.798	Homo_sapiens
ENSCCAG00000033206	HFM1	60	64.177	ENSAPOG00000005304	hfm1	96	64.177	Acanthochromis_polyacanthus
ENSCCAG00000033206	HFM1	100	84.851	ENSAMEG00000000432	HFM1	100	84.851	Ailuropoda_melanoleuca
ENSCCAG00000033206	HFM1	70	59.883	ENSACIG00000021553	hfm1	91	59.883	Amphilophus_citrinellus
ENSCCAG00000033206	HFM1	60	65.146	ENSAOCG00000022839	hfm1	96	68.348	Amphiprion_ocellaris
ENSCCAG00000033206	HFM1	60	64.795	ENSAPEG00000014316	hfm1	96	68.394	Amphiprion_percula
ENSCCAG00000033206	HFM1	67	63.740	ENSATEG00000019181	hfm1	80	62.882	Anabas_testudineus
ENSCCAG00000033206	HFM1	100	59.753	ENSAPLG00000013639	HFM1	100	59.753	Anas_platyrhynchos
ENSCCAG00000033206	HFM1	100	94.425	ENSANAG00000029513	HFM1	100	94.425	Aotus_nancymaae
ENSCCAG00000033206	HFM1	65	63.197	ENSACLG00000009033	hfm1	98	64.033	Astatotilapia_calliptera
ENSCCAG00000033206	HFM1	91	51.780	ENSAMXG00000006108	hfm1	88	51.780	Astyanax_mexicanus
ENSCCAG00000033206	HFM1	100	83.403	ENSBTAG00000020856	HFM1	100	83.403	Bos_taurus
ENSCCAG00000033206	HFM1	100	96.999	ENSCJAG00000001843	HFM1	100	96.999	Callithrix_jacchus
ENSCCAG00000033206	HFM1	100	84.503	ENSCAFG00000020187	HFM1	100	84.503	Canis_familiaris
ENSCCAG00000033206	HFM1	100	84.920	ENSTSYG00000014250	HFM1	100	84.920	Carlito_syrichta
ENSCCAG00000033206	HFM1	99	77.561	ENSCPOG00000007421	HFM1	99	77.561	Cavia_porcellus
ENSCCAG00000033206	HFM1	100	93.101	ENSCATG00000030987	HFM1	100	93.101	Cercocebus_atys
ENSCCAG00000033206	HFM1	100	79.285	ENSCLAG00000005173	HFM1	99	79.285	Chinchilla_lanigera
ENSCCAG00000033206	HFM1	68	94.737	ENSCHOG00000011824	-	77	94.737	Choloepus_hoffmanni
ENSCCAG00000033206	HFM1	100	72.526	ENSCGRG00001016995	Hfm1	100	72.526	Cricetulus_griseus_chok1gshd
ENSCCAG00000033206	HFM1	100	76.372	ENSCGRG00000017181	Hfm1	100	76.372	Cricetulus_griseus_crigri
ENSCCAG00000033206	HFM1	71	59.043	ENSCSEG00000017659	hfm1	93	59.330	Cynoglossus_semilaevis
ENSCCAG00000033206	HFM1	50	68.112	ENSCVAG00000005075	hfm1	86	68.112	Cyprinodon_variegatus
ENSCCAG00000033206	HFM1	79	54.482	ENSDARG00000104288	hfm1	99	54.482	Danio_rerio
ENSCCAG00000033206	HFM1	100	79.919	ENSDNOG00000004776	HFM1	100	79.919	Dasypus_novemcinctus
ENSCCAG00000033206	HFM1	100	77.335	ENSDORG00000014661	Hfm1	100	77.335	Dipodomys_ordii
ENSCCAG00000033206	HFM1	71	84.501	ENSEASG00005015424	HFM1	97	84.501	Equus_asinus_asinus
ENSCCAG00000033206	HFM1	100	82.896	ENSECAG00000024039	HFM1	100	82.896	Equus_caballus
ENSCCAG00000033206	HFM1	63	66.630	ENSELUG00000018944	hfm1	97	66.630	Esox_lucius
ENSCCAG00000033206	HFM1	100	84.444	ENSFCAG00000029116	HFM1	100	84.444	Felis_catus
ENSCCAG00000033206	HFM1	100	60.082	ENSFALG00000001781	HFM1	100	60.496	Ficedula_albicollis
ENSCCAG00000033206	HFM1	100	77.972	ENSFDAG00000020816	HFM1	100	77.972	Fukomys_damarensis
ENSCCAG00000033206	HFM1	66	59.625	ENSGMOG00000017436	hfm1	100	59.625	Gadus_morhua
ENSCCAG00000033206	HFM1	71	61.224	ENSGAFG00000018093	hfm1	92	66.464	Gambusia_affinis
ENSCCAG00000033206	HFM1	67	61.163	ENSGACG00000015686	hfm1	99	61.163	Gasterosteus_aculeatus
ENSCCAG00000033206	HFM1	100	93.659	ENSGGOG00000038524	HFM1	100	93.659	Gorilla_gorilla
ENSCCAG00000033206	HFM1	65	64.270	ENSHBUG00000007309	hfm1	96	59.581	Haplochromis_burtoni
ENSCCAG00000033206	HFM1	57	63.313	ENSHCOG00000019632	hfm1	97	63.313	Hippocampus_comes
ENSCCAG00000033206	HFM1	66	64.030	ENSIPUG00000017020	hfm1	92	65.357	Ictalurus_punctatus
ENSCCAG00000033206	HFM1	100	77.175	ENSJJAG00000017198	Hfm1	100	77.175	Jaculus_jaculus
ENSCCAG00000033206	HFM1	62	63.041	ENSKMAG00000002282	hfm1	90	63.041	Kryptolebias_marmoratus
ENSCCAG00000033206	HFM1	71	60.079	ENSLBEG00000006759	hfm1	98	64.512	Labrus_bergylta
ENSCCAG00000033206	HFM1	70	66.604	ENSLACG00000010698	HFM1	99	66.698	Latimeria_chalumnae
ENSCCAG00000033206	HFM1	71	64.231	ENSLOCG00000004931	hfm1	95	64.231	Lepisosteus_oculatus
ENSCCAG00000033206	HFM1	52	89.233	ENSLAFG00000015903	-	99	89.233	Loxodonta_africana
ENSCCAG00000033206	HFM1	100	89.729	ENSMFAG00000003649	HFM1	100	89.729	Macaca_fascicularis
ENSCCAG00000033206	HFM1	100	92.683	ENSMMUG00000006819	HFM1	100	92.683	Macaca_mulatta
ENSCCAG00000033206	HFM1	58	65.821	ENSMAMG00000004623	hfm1	97	65.821	Mastacembelus_armatus
ENSCCAG00000033206	HFM1	65	63.197	ENSMZEG00005004679	hfm1	98	64.033	Maylandia_zebra
ENSCCAG00000033206	HFM1	55	76.913	ENSMGAG00000008437	HFM1	98	76.913	Meleagris_gallopavo
ENSCCAG00000033206	HFM1	100	76.667	ENSMAUG00000018858	Hfm1	100	76.667	Mesocricetus_auratus
ENSCCAG00000033206	HFM1	100	86.449	ENSMICG00000037935	HFM1	100	86.449	Microcebus_murinus
ENSCCAG00000033206	HFM1	100	74.757	ENSMOCG00000014812	Hfm1	100	74.757	Microtus_ochrogaster
ENSCCAG00000033206	HFM1	62	63.117	ENSMMOG00000006148	hfm1	96	63.647	Mola_mola
ENSCCAG00000033206	HFM1	65	63.394	ENSMALG00000002401	hfm1	96	64.720	Monopterus_albus
ENSCCAG00000033206	HFM1	96	70.349	MGP_CAROLIEiJ_G0027496	Hfm1	100	70.349	Mus_caroli
ENSCCAG00000033206	HFM1	100	75.591	ENSMUSG00000043410	Hfm1	100	75.591	Mus_musculus
ENSCCAG00000033206	HFM1	100	75.382	MGP_PahariEiJ_G0017268	Hfm1	100	75.382	Mus_pahari
ENSCCAG00000033206	HFM1	100	75.313	MGP_SPRETEiJ_G0028495	Hfm1	100	75.313	Mus_spretus
ENSCCAG00000033206	HFM1	100	81.010	ENSMPUG00000004594	HFM1	100	81.010	Mustela_putorius_furo
ENSCCAG00000033206	HFM1	100	81.818	ENSMLUG00000010200	HFM1	100	81.818	Myotis_lucifugus
ENSCCAG00000033206	HFM1	65	60.450	ENSNBRG00000002910	hfm1	97	64.970	Neolamprologus_brichardi
ENSCCAG00000033206	HFM1	100	89.074	ENSNLEG00000010285	HFM1	100	89.074	Nomascus_leucogenys
ENSCCAG00000033206	HFM1	84	66.954	ENSMEUG00000015788	HFM1	84	66.954	Notamacropus_eugenii
ENSCCAG00000033206	HFM1	84	77.433	ENSOPRG00000013916	HFM1	84	77.433	Ochotona_princeps
ENSCCAG00000033206	HFM1	72	61.138	ENSONIG00000010590	hfm1	100	61.010	Oreochromis_niloticus
ENSCCAG00000033206	HFM1	57	65.437	ENSORLG00000026844	hfm1	99	65.437	Oryzias_latipes
ENSCCAG00000033206	HFM1	84	49.674	ENSORLG00020002951	hfm1	97	49.556	Oryzias_latipes_hni
ENSCCAG00000033206	HFM1	74	58.148	ENSOMEG00000016474	hfm1	92	52.126	Oryzias_melastigma
ENSCCAG00000033206	HFM1	85	86.808	ENSOGAG00000032369	HFM1	100	86.808	Otolemur_garnettii
ENSCCAG00000033206	HFM1	100	83.622	ENSOARG00000015812	HFM1	100	83.622	Ovis_aries
ENSCCAG00000033206	HFM1	92	94.260	ENSPPAG00000024582	HFM1	100	94.260	Pan_paniscus
ENSCCAG00000033206	HFM1	100	84.444	ENSPPRG00000003270	HFM1	100	84.444	Panthera_pardus
ENSCCAG00000033206	HFM1	100	84.375	ENSPTIG00000018881	HFM1	100	84.375	Panthera_tigris_altaica
ENSCCAG00000033206	HFM1	100	93.659	ENSPTRG00000000948	HFM1	100	93.659	Pan_troglodytes
ENSCCAG00000033206	HFM1	100	92.962	ENSPANG00000009838	HFM1	100	92.962	Papio_anubis
ENSCCAG00000033206	HFM1	64	65.351	ENSPKIG00000003810	hfm1	95	67.030	Paramormyrops_kingsleyae
ENSCCAG00000033206	HFM1	58	65.296	ENSPMGG00000011059	hfm1	100	65.296	Periophthalmus_magnuspinnatus
ENSCCAG00000033206	HFM1	100	78.303	ENSPEMG00000022852	Hfm1	100	78.303	Peromyscus_maniculatus_bairdii
ENSCCAG00000033206	HFM1	100	66.510	ENSPCIG00000014233	HFM1	100	66.510	Phascolarctos_cinereus
ENSCCAG00000033206	HFM1	70	61.611	ENSPFOG00000017194	hfm1	99	61.611	Poecilia_formosa
ENSCCAG00000033206	HFM1	72	62.095	ENSPLAG00000000571	hfm1	92	63.010	Poecilia_latipinna
ENSCCAG00000033206	HFM1	71	62.645	ENSPMEG00000019475	hfm1	92	62.645	Poecilia_mexicana
ENSCCAG00000033206	HFM1	70	62.660	ENSPREG00000007803	hfm1	92	66.180	Poecilia_reticulata
ENSCCAG00000033206	HFM1	100	93.449	ENSPPYG00000001163	HFM1	100	93.449	Pongo_abelii
ENSCCAG00000033206	HFM1	74	79.730	ENSPCAG00000004289	-	74	79.730	Procavia_capensis
ENSCCAG00000033206	HFM1	100	76.200	ENSPVAG00000009713	HFM1	100	76.200	Pteropus_vampyrus
ENSCCAG00000033206	HFM1	65	62.983	ENSPNYG00000001795	hfm1	98	63.915	Pundamilia_nyererei
ENSCCAG00000033206	HFM1	59	66.903	ENSPNAG00000010865	hfm1	84	66.903	Pygocentrus_nattereri
ENSCCAG00000033206	HFM1	100	74.896	ENSRNOG00000023299	Hfm1	100	74.896	Rattus_norvegicus
ENSCCAG00000033206	HFM1	100	92.822	ENSRROG00000045569	HFM1	100	92.822	Rhinopithecus_roxellana
ENSCCAG00000033206	HFM1	100	94.068	ENSSBOG00000027456	HFM1	100	94.068	Saimiri_boliviensis_boliviensis
ENSCCAG00000033206	HFM1	59	71.412	ENSSHAG00000014616	-	98	71.412	Sarcophilus_harrisii
ENSCCAG00000033206	HFM1	86	55.889	ENSSFOG00015020129	hfm1	96	55.889	Scleropages_formosus
ENSCCAG00000033206	HFM1	62	64.022	ENSSMAG00000006907	hfm1	87	64.022	Scophthalmus_maximus
ENSCCAG00000033206	HFM1	60	63.743	ENSSDUG00000011424	hfm1	96	63.743	Seriola_dumerili
ENSCCAG00000033206	HFM1	60	63.879	ENSSLDG00000016386	hfm1	96	63.879	Seriola_lalandi_dorsalis
ENSCCAG00000033206	HFM1	66	60.379	ENSSPAG00000001023	hfm1	96	64.678	Stegastes_partitus
ENSCCAG00000033206	HFM1	100	80.067	ENSSSCG00000006912	HFM1	100	80.067	Sus_scrofa
ENSCCAG00000033206	HFM1	67	74.817	ENSTGUG00000006172	HFM1	100	74.817	Taeniopygia_guttata
ENSCCAG00000033206	HFM1	100	80.139	ENSTTRG00000013933	HFM1	100	80.139	Tursiops_truncatus
ENSCCAG00000033206	HFM1	93	82.588	ENSVPAG00000011331	HFM1	93	82.588	Vicugna_pacos
ENSCCAG00000033206	HFM1	71	82.091	ENSVVUG00000020760	HFM1	99	82.091	Vulpes_vulpes
ENSCCAG00000033206	HFM1	58	66.189	ENSXMAG00000004178	hfm1	92	66.189	Xiphophorus_maculatus