EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000033627 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 3408 bases
Position: chrKV389431.1:1628675-1632082
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000031136	LSM	PF01423.22	1.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000048886	-	384	-	ENSCCAP00000031136	127 (aa)	-	A0A2K5RSR9

Gene Model

Click here to download ENSCCAG00000033627's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000033627's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000033627	-	52	45.455	ENSCCAG00000036437	LSM6	83	45.455
ENSCCAG00000033627	-	68	87.209	ENSCCAG00000017356	-	100	87.209
ENSCCAG00000033627	-	52	45.455	ENSCCAG00000020665	-	83	45.455
ENSCCAG00000033627	-	59	89.333	ENSCCAG00000037378	-	100	88.372

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000033627	-	59	89.333	ENSG00000139343	SNRPF	100	88.372	Homo_sapiens
ENSCCAG00000033627	-	72	73.958	ENSAPOG00000003377	snrpf	84	74.766	Acanthochromis_polyacanthus
ENSCCAG00000033627	-	57	91.781	ENSAMEG00000002166	-	99	90.476	Ailuropoda_melanoleuca
ENSCCAG00000033627	-	60	77.632	ENSAMEG00000018718	-	100	77.907	Ailuropoda_melanoleuca
ENSCCAG00000033627	-	57	89.041	ENSACIG00000013216	snrpf	99	88.095	Amphilophus_citrinellus
ENSCCAG00000033627	-	57	89.041	ENSAOCG00000015108	snrpf	99	88.095	Amphiprion_ocellaris
ENSCCAG00000033627	-	57	89.041	ENSAPEG00000022022	snrpf	99	88.095	Amphiprion_percula
ENSCCAG00000033627	-	63	83.750	ENSATEG00000022625	snrpf	98	83.516	Anabas_testudineus
ENSCCAG00000033627	-	57	90.411	ENSACAG00000014073	SNRPF	97	89.286	Anolis_carolinensis
ENSCCAG00000033627	-	59	68.000	ENSANAG00000025860	-	100	70.930	Aotus_nancymaae
ENSCCAG00000033627	-	71	74.444	ENSANAG00000020297	-	90	75.248	Aotus_nancymaae
ENSCCAG00000033627	-	59	89.333	ENSANAG00000032845	SNRPF	100	88.372	Aotus_nancymaae
ENSCCAG00000033627	-	57	89.041	ENSACLG00000016066	snrpf	99	88.095	Astatotilapia_calliptera
ENSCCAG00000033627	-	59	84.000	ENSAMXG00000007421	snrpf	100	83.721	Astyanax_mexicanus
ENSCCAG00000033627	-	63	82.500	ENSBTAG00000050012	-	99	82.500	Bos_taurus
ENSCCAG00000033627	-	59	89.333	ENSBTAG00000016271	SNRPF	100	88.372	Bos_taurus
ENSCCAG00000033627	-	59	66.667	WBGene00004918	snr-5	88	66.667	Caenorhabditis_elegans
ENSCCAG00000033627	-	59	89.333	ENSCJAG00000002705	-	100	88.372	Callithrix_jacchus
ENSCCAG00000033627	-	57	84.932	ENSCAFG00000031151	-	100	83.721	Canis_familiaris
ENSCCAG00000033627	-	64	86.420	ENSCAFG00000006395	-	92	78.641	Canis_familiaris
ENSCCAG00000033627	-	58	86.486	ENSCAFG00020013161	-	79	86.486	Canis_lupus_dingo
ENSCCAG00000033627	-	57	84.932	ENSCAFG00020010823	-	100	83.721	Canis_lupus_dingo
ENSCCAG00000033627	-	59	82.895	ENSTSYG00000036502	-	100	82.759	Carlito_syrichta
ENSCCAG00000033627	-	59	78.667	ENSTSYG00000030635	-	100	79.070	Carlito_syrichta
ENSCCAG00000033627	-	90	68.421	ENSTSYG00000031636	-	92	68.421	Carlito_syrichta
ENSCCAG00000033627	-	57	91.781	ENSCAPG00000007242	SNRPF	99	90.476	Cavia_aperea
ENSCCAG00000033627	-	59	89.333	ENSCPOG00000013898	SNRPF	100	88.372	Cavia_porcellus
ENSCCAG00000033627	-	57	91.781	ENSCLAG00000007200	SNRPF	100	88.372	Chinchilla_lanigera
ENSCCAG00000033627	-	71	73.786	ENSCSAG00000003602	-	93	74.561	Chlorocebus_sabaeus
ENSCCAG00000033627	-	50	89.062	ENSCHOG00000009392	SNRPF	100	89.062	Choloepus_hoffmanni
ENSCCAG00000033627	-	68	77.907	ENSCPBG00000001985	-	100	77.907	Chrysemys_picta_bellii
ENSCCAG00000033627	-	85	70.536	ENSCPBG00000024287	-	86	70.536	Chrysemys_picta_bellii
ENSCCAG00000033627	-	59	82.667	ENSCPBG00000006227	-	100	81.395	Chrysemys_picta_bellii
ENSCCAG00000033627	-	68	81.395	ENSCPBG00000026463	-	100	81.395	Chrysemys_picta_bellii
ENSCCAG00000033627	-	66	78.571	ENSCSAVG00000007498	-	95	78.571	Ciona_savignyi
ENSCCAG00000033627	-	61	88.312	ENSCGRG00001017100	-	100	88.372	Cricetulus_griseus_chok1gshd
ENSCCAG00000033627	-	70	82.022	ENSCGRG00001008965	-	74	76.842	Cricetulus_griseus_chok1gshd
ENSCCAG00000033627	-	61	85.714	ENSCGRG00000018878	-	96	85.714	Cricetulus_griseus_crigri
ENSCCAG00000033627	-	61	88.312	ENSCGRG00000000336	-	100	88.372	Cricetulus_griseus_crigri
ENSCCAG00000033627	-	61	85.714	ENSCSEG00000004748	snrpf	100	86.047	Cynoglossus_semilaevis
ENSCCAG00000033627	-	57	89.041	ENSCVAG00000000397	snrpf	67	88.095	Cyprinodon_variegatus
ENSCCAG00000033627	-	59	84.416	ENSDARG00000105037	snrpf	100	84.091	Danio_rerio
ENSCCAG00000033627	-	60	88.158	ENSDNOG00000043775	-	56	87.356	Dasypus_novemcinctus
ENSCCAG00000033627	-	59	88.000	ENSDNOG00000048989	-	77	87.209	Dasypus_novemcinctus
ENSCCAG00000033627	-	60	72.368	ENSDNOG00000049373	-	79	71.429	Dasypus_novemcinctus
ENSCCAG00000033627	-	57	80.556	ENSDORG00000025351	-	100	80.556	Dipodomys_ordii
ENSCCAG00000033627	-	69	68.966	FBgn0000426	SmF	99	68.966	Drosophila_melanogaster
ENSCCAG00000033627	-	59	89.333	ENSETEG00000001558	-	100	88.372	Echinops_telfairi
ENSCCAG00000033627	-	65	67.470	ENSEBUG00000001793	-	89	67.470	Eptatretus_burgeri
ENSCCAG00000033627	-	74	72.816	ENSECAG00000019817	SNRPF	93	73.684	Equus_caballus
ENSCCAG00000033627	-	57	91.781	ENSEEUG00000013509	SNRPF	99	90.476	Erinaceus_europaeus
ENSCCAG00000033627	-	85	67.593	ENSELUG00000007737	RUXF	99	80.233	Esox_lucius
ENSCCAG00000033627	-	59	84.000	ENSELUG00000003121	RUXF	100	83.721	Esox_lucius
ENSCCAG00000033627	-	59	69.333	ENSFCAG00000021942	-	100	70.930	Felis_catus
ENSCCAG00000033627	-	59	89.333	ENSFCAG00000029966	-	100	88.372	Felis_catus
ENSCCAG00000033627	-	72	63.000	ENSFCAG00000031148	-	92	63.000	Felis_catus
ENSCCAG00000033627	-	57	91.781	ENSFALG00000010799	SNRPF	98	90.476	Ficedula_albicollis
ENSCCAG00000033627	-	59	89.333	ENSFDAG00000002831	-	100	88.372	Fukomys_damarensis
ENSCCAG00000033627	-	74	73.404	ENSFHEG00000003240	snrpf	89	74.286	Fundulus_heteroclitus
ENSCCAG00000033627	-	57	89.041	ENSGMOG00000007741	snrpf	99	88.095	Gadus_morhua
ENSCCAG00000033627	-	59	89.333	ENSGALG00000011409	SNRPF	100	88.372	Gallus_gallus
ENSCCAG00000033627	-	57	89.041	ENSGAFG00000016187	snrpf	97	88.095	Gambusia_affinis
ENSCCAG00000033627	-	57	87.671	ENSGACG00000020055	snrpf	99	86.905	Gasterosteus_aculeatus
ENSCCAG00000033627	-	62	82.278	ENSGAGG00000022991	-	89	82.278	Gopherus_agassizii
ENSCCAG00000033627	-	54	78.261	ENSGAGG00000014132	-	95	72.152	Gopherus_agassizii
ENSCCAG00000033627	-	50	84.127	ENSGAGG00000020974	-	53	84.127	Gopherus_agassizii
ENSCCAG00000033627	-	58	85.135	ENSGAGG00000012945	-	78	80.460	Gopherus_agassizii
ENSCCAG00000033627	-	57	91.781	ENSGGOG00000001127	-	99	90.476	Gorilla_gorilla
ENSCCAG00000033627	-	66	72.619	ENSGGOG00000039936	-	95	72.619	Gorilla_gorilla
ENSCCAG00000033627	-	62	72.152	ENSGGOG00000039564	-	96	72.152	Gorilla_gorilla
ENSCCAG00000033627	-	59	89.333	ENSHGLG00000009108	SNRPF	100	88.372	Heterocephalus_glaber_female
ENSCCAG00000033627	-	59	88.000	ENSHGLG00000021172	-	100	87.209	Heterocephalus_glaber_female
ENSCCAG00000033627	-	59	88.000	ENSHGLG00100019596	-	100	87.209	Heterocephalus_glaber_male
ENSCCAG00000033627	-	57	91.781	ENSHGLG00100008103	-	99	90.476	Heterocephalus_glaber_male
ENSCCAG00000033627	-	50	78.571	ENSHCOG00000018663	snrpf	55	78.571	Hippocampus_comes
ENSCCAG00000033627	-	57	89.041	ENSIPUG00000018994	snrpf	99	88.095	Ictalurus_punctatus
ENSCCAG00000033627	-	59	89.333	ENSSTOG00000010434	-	100	88.372	Ictidomys_tridecemlineatus
ENSCCAG00000033627	-	68	76.744	ENSJJAG00000010502	-	100	76.744	Jaculus_jaculus
ENSCCAG00000033627	-	53	85.075	ENSJJAG00000004828	-	100	85.075	Jaculus_jaculus
ENSCCAG00000033627	-	68	75.581	ENSJJAG00000004558	-	100	75.581	Jaculus_jaculus
ENSCCAG00000033627	-	59	90.667	ENSJJAG00000011272	-	99	89.535	Jaculus_jaculus
ENSCCAG00000033627	-	57	89.041	ENSKMAG00000013566	snrpf	98	88.095	Kryptolebias_marmoratus
ENSCCAG00000033627	-	59	85.333	ENSLBEG00000008800	snrpf	100	84.884	Labrus_bergylta
ENSCCAG00000033627	-	57	91.781	ENSLACG00000002456	-	72	90.476	Latimeria_chalumnae
ENSCCAG00000033627	-	59	86.667	ENSLOCG00000015744	snrpf	100	86.047	Lepisosteus_oculatus
ENSCCAG00000033627	-	57	91.781	ENSLAFG00000017426	SNRPF	98	90.476	Loxodonta_africana
ENSCCAG00000033627	-	57	87.671	ENSMAMG00000016593	snrpf	99	86.905	Mastacembelus_armatus
ENSCCAG00000033627	-	57	89.041	ENSMZEG00005014701	snrpf	99	88.095	Maylandia_zebra
ENSCCAG00000033627	-	57	91.781	ENSMGAG00000011453	-	76	90.476	Meleagris_gallopavo
ENSCCAG00000033627	-	59	84.000	ENSMAUG00000008799	-	100	83.721	Mesocricetus_auratus
ENSCCAG00000033627	-	67	68.235	ENSMAUG00000010289	-	99	68.235	Mesocricetus_auratus
ENSCCAG00000033627	-	50	92.063	ENSMAUG00000019737	-	100	90.541	Mesocricetus_auratus
ENSCCAG00000033627	-	50	92.063	ENSMAUG00000016909	-	100	90.541	Mesocricetus_auratus
ENSCCAG00000033627	-	59	89.333	ENSMICG00000012153	-	100	88.372	Microcebus_murinus
ENSCCAG00000033627	-	60	84.211	ENSMICG00000030494	-	82	79.412	Microcebus_murinus
ENSCCAG00000033627	-	54	77.941	ENSMOCG00000020220	-	100	78.481	Microtus_ochrogaster
ENSCCAG00000033627	-	59	89.333	ENSMOCG00000020437	Snrpf	100	88.372	Microtus_ochrogaster
ENSCCAG00000033627	-	59	77.333	ENSMOCG00000022166	-	98	73.626	Microtus_ochrogaster
ENSCCAG00000033627	-	57	87.671	ENSMMOG00000007127	snrpf	99	86.905	Mola_mola
ENSCCAG00000033627	-	60	88.158	ENSMODG00000008091	SNRPF	76	87.356	Monodelphis_domestica
ENSCCAG00000033627	-	57	89.041	ENSMALG00000012328	snrpf	99	88.095	Monopterus_albus
ENSCCAG00000033627	-	59	89.333	MGP_CAROLIEiJ_G0015735	-	100	88.372	Mus_caroli
ENSCCAG00000033627	-	59	89.333	ENSMUSG00000020018	Snrpf	100	88.372	Mus_musculus
ENSCCAG00000033627	-	59	89.333	MGP_PahariEiJ_G0031350	Snrpf	100	88.372	Mus_pahari
ENSCCAG00000033627	-	59	89.333	MGP_SPRETEiJ_G0016553	Snrpf	100	88.372	Mus_spretus
ENSCCAG00000033627	-	77	73.267	ENSMPUG00000007176	-	99	74.107	Mustela_putorius_furo
ENSCCAG00000033627	-	63	85.000	ENSMLUG00000026149	-	86	84.615	Myotis_lucifugus
ENSCCAG00000033627	-	78	63.636	ENSMLUG00000026269	-	93	63.636	Myotis_lucifugus
ENSCCAG00000033627	-	63	85.000	ENSMLUG00000029201	-	86	84.615	Myotis_lucifugus
ENSCCAG00000033627	-	63	85.000	ENSMLUG00000027932	-	86	84.615	Myotis_lucifugus
ENSCCAG00000033627	-	57	91.781	ENSMLUG00000013577	-	99	90.476	Myotis_lucifugus
ENSCCAG00000033627	-	59	89.333	ENSNGAG00000024292	-	100	88.372	Nannospalax_galili
ENSCCAG00000033627	-	50	82.540	ENSNGAG00000005851	-	74	82.540	Nannospalax_galili
ENSCCAG00000033627	-	57	89.041	ENSNBRG00000011682	snrpf	86	88.095	Neolamprologus_brichardi
ENSCCAG00000033627	-	57	64.384	ENSMEUG00000000671	SNRPF	99	66.667	Notamacropus_eugenii
ENSCCAG00000033627	-	57	91.781	ENSODEG00000010328	-	99	90.476	Octodon_degus
ENSCCAG00000033627	-	61	88.312	ENSOCUG00000010925	SNRPF	78	87.500	Oryctolagus_cuniculus
ENSCCAG00000033627	-	57	86.301	ENSORLG00020008216	snrpf	99	85.714	Oryzias_latipes_hni
ENSCCAG00000033627	-	57	86.301	ENSORLG00015007418	snrpf	99	85.714	Oryzias_latipes_hsok
ENSCCAG00000033627	-	57	87.671	ENSOMEG00000003018	snrpf	99	86.905	Oryzias_melastigma
ENSCCAG00000033627	-	59	88.000	ENSOGAG00000030323	-	100	86.047	Otolemur_garnettii
ENSCCAG00000033627	-	60	88.158	ENSOARG00000011853	-	76	87.356	Ovis_aries
ENSCCAG00000033627	-	66	72.619	ENSPPAG00000037544	-	95	72.619	Pan_paniscus
ENSCCAG00000033627	-	62	70.886	ENSPPAG00000037479	-	96	70.886	Pan_paniscus
ENSCCAG00000033627	-	59	89.333	ENSPPRG00000005875	-	100	88.372	Panthera_pardus
ENSCCAG00000033627	-	66	66.667	ENSPPRG00000007449	-	86	66.667	Panthera_pardus
ENSCCAG00000033627	-	59	89.333	ENSPTIG00000007520	SNRPF	100	88.372	Panthera_tigris_altaica
ENSCCAG00000033627	-	66	69.048	ENSPTIG00000005117	-	100	69.048	Panthera_tigris_altaica
ENSCCAG00000033627	-	62	70.886	ENSPTRG00000047717	-	96	70.886	Pan_troglodytes
ENSCCAG00000033627	-	66	72.619	ENSPTRG00000043814	-	95	72.619	Pan_troglodytes
ENSCCAG00000033627	-	57	89.041	ENSPKIG00000014784	snrpf	92	88.095	Paramormyrops_kingsleyae
ENSCCAG00000033627	-	57	91.781	ENSPSIG00000016462	SNRPF	98	90.476	Pelodiscus_sinensis
ENSCCAG00000033627	-	57	87.671	ENSPMGG00000023548	snrpf	99	86.905	Periophthalmus_magnuspinnatus
ENSCCAG00000033627	-	58	90.541	ENSPEMG00000023326	Snrpf	100	88.372	Peromyscus_maniculatus_bairdii
ENSCCAG00000033627	-	57	89.041	ENSPLAG00000023932	snrpf	99	88.095	Poecilia_latipinna
ENSCCAG00000033627	-	57	89.041	ENSPMEG00000003377	snrpf	99	88.095	Poecilia_mexicana
ENSCCAG00000033627	-	57	89.041	ENSPREG00000022635	snrpf	97	88.095	Poecilia_reticulata
ENSCCAG00000033627	-	59	89.333	ENSPPYG00000004847	-	100	88.372	Pongo_abelii
ENSCCAG00000033627	-	59	89.333	ENSPCOG00000023833	-	100	88.372	Propithecus_coquereli
ENSCCAG00000033627	-	59	89.333	ENSPVAG00000009036	SNRPF	100	88.372	Pteropus_vampyrus
ENSCCAG00000033627	-	57	89.041	ENSPNYG00000021712	snrpf	99	88.095	Pundamilia_nyererei
ENSCCAG00000033627	-	57	87.671	ENSPNAG00000019117	snrpf	99	86.905	Pygocentrus_nattereri
ENSCCAG00000033627	-	59	89.333	ENSRNOG00000005556	Snrpf	100	88.372	Rattus_norvegicus
ENSCCAG00000033627	-	59	86.667	ENSRBIG00000030414	-	100	86.047	Rhinopithecus_bieti
ENSCCAG00000033627	-	59	86.667	ENSRROG00000021975	-	100	86.047	Rhinopithecus_roxellana
ENSCCAG00000033627	-	55	56.338	YPR182W	SMX3	83	56.338	Saccharomyces_cerevisiae
ENSCCAG00000033627	-	59	73.077	ENSSBOG00000027638	-	100	74.157	Saimiri_boliviensis_boliviensis
ENSCCAG00000033627	-	59	78.667	ENSSBOG00000032297	-	100	77.907	Saimiri_boliviensis_boliviensis
ENSCCAG00000033627	-	59	89.333	ENSSBOG00000036179	-	100	88.372	Saimiri_boliviensis_boliviensis
ENSCCAG00000033627	-	59	89.333	ENSSBOG00000012868	-	100	87.209	Saimiri_boliviensis_boliviensis
ENSCCAG00000033627	-	60	88.158	ENSSHAG00000012294	SNRPF	78	87.356	Sarcophilus_harrisii
ENSCCAG00000033627	-	50	88.889	ENSSFOG00015021523	snrpf	94	88.889	Scleropages_formosus
ENSCCAG00000033627	-	59	85.333	ENSSMAG00000005533	snrpf	99	84.884	Scophthalmus_maximus
ENSCCAG00000033627	-	51	86.154	ENSSDUG00000016283	snrpf	77	86.154	Seriola_dumerili
ENSCCAG00000033627	-	59	88.000	ENSSLDG00000005119	snrpf	100	87.209	Seriola_lalandi_dorsalis
ENSCCAG00000033627	-	62	68.354	ENSSLDG00000003885	-	96	68.354	Seriola_lalandi_dorsalis
ENSCCAG00000033627	-	57	91.781	ENSSPUG00000014590	-	99	90.476	Sphenodon_punctatus
ENSCCAG00000033627	-	57	89.041	ENSSPAG00000003283	snrpf	95	88.095	Stegastes_partitus
ENSCCAG00000033627	-	59	89.333	ENSSSCG00000000895	SNRPF	100	88.372	Sus_scrofa
ENSCCAG00000033627	-	59	85.333	ENSTNIG00000012672	snrpf	100	84.884	Tetraodon_nigroviridis
ENSCCAG00000033627	-	59	62.667	ENSTTRG00000006070	SNRPF	100	65.116	Tursiops_truncatus
ENSCCAG00000033627	-	68	76.744	ENSUAMG00000001101	-	100	76.744	Ursus_americanus
ENSCCAG00000033627	-	59	89.333	ENSUAMG00000008176	-	100	88.372	Ursus_americanus
ENSCCAG00000033627	-	59	80.000	ENSUMAG00000006177	-	100	75.581	Ursus_maritimus
ENSCCAG00000033627	-	59	89.333	ENSUMAG00000003528	-	100	88.372	Ursus_maritimus
ENSCCAG00000033627	-	59	89.333	ENSVPAG00000008712	-	100	88.372	Vicugna_pacos
ENSCCAG00000033627	-	61	87.179	ENSVVUG00000023821	-	100	87.179	Vulpes_vulpes
ENSCCAG00000033627	-	57	66.667	ENSXETG00000021630	snrpf	99	68.605	Xenopus_tropicalis
ENSCCAG00000033627	-	57	89.041	ENSXCOG00000013860	snrpf	97	88.095	Xiphophorus_couchianus
ENSCCAG00000033627	-	57	89.041	ENSXMAG00000015448	snrpf	99	88.095	Xiphophorus_maculatus