EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000033664 (Gene tree)
Gene ID: 108308538
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 101942 bases
Position: chrKV389511.1:7240961-7342902
Accession: 108308538
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000031272	Ago_hook	PF10427.9	2.6e-19	1	1
ENSCCAP00000031266	Ago_hook	PF10427.9	4.6e-19	1	1
ENSCCAP00000031282	Ago_hook	PF10427.9	5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000049022	TNRC6A-202	5724	-	ENSCCAP00000031272	1907 (aa)	-	A0A2K5RSZ0
ENSCCAT00000049016	TNRC6A-201	9696	XM_017534420	ENSCCAP00000031266	1956 (aa)	XP_017389909	A0A2K5RT46
ENSCCAT00000049032	TNRC6A-203	5790	-	ENSCCAP00000031282	1929 (aa)	-	A0A2K5RT00

Gene Model

Click here to download ENSCCAG00000033664's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000033664's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000033664	TNRC6A	98	37.500	ENSCCAG00000019912	TNRC6B	94	46.250
ENSCCAG00000033664	TNRC6A	97	49.926	ENSCCAG00000030524	TNRC6C	98	44.065

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000033664	TNRC6A	100	98.981	ENSG00000090905	TNRC6A	100	98.981	Homo_sapiens
ENSCCAG00000033664	TNRC6A	99	96.292	ENSAMEG00000009333	TNRC6A	100	96.503	Ailuropoda_melanoleuca
ENSCCAG00000033664	TNRC6A	99	81.742	ENSAPLG00000009978	TNRC6A	100	81.794	Anas_platyrhynchos
ENSCCAG00000033664	TNRC6A	100	54.400	ENSACAG00000011857	TNRC6A	100	56.433	Anolis_carolinensis
ENSCCAG00000033664	TNRC6A	100	99.591	ENSANAG00000025252	TNRC6A	100	99.591	Aotus_nancymaae
ENSCCAG00000033664	TNRC6A	92	56.041	ENSAMXG00000019919	tnrc6a	99	56.702	Astyanax_mexicanus
ENSCCAG00000033664	TNRC6A	100	95.340	ENSBTAG00000017999	TNRC6A	100	94.921	Bos_taurus
ENSCCAG00000033664	TNRC6A	100	99.237	ENSCJAG00000020677	TNRC6A	100	99.237	Callithrix_jacchus
ENSCCAG00000033664	TNRC6A	99	96.478	ENSCAFG00000017531	TNRC6A	100	96.478	Canis_familiaris
ENSCCAG00000033664	TNRC6A	99	95.118	ENSCAFG00020021160	TNRC6A	99	95.071	Canis_lupus_dingo
ENSCCAG00000033664	TNRC6A	100	94.921	ENSCHIG00000019448	TNRC6A	100	94.991	Capra_hircus
ENSCCAG00000033664	TNRC6A	100	96.886	ENSTSYG00000012711	TNRC6A	100	96.886	Carlito_syrichta
ENSCCAG00000033664	TNRC6A	99	96.122	ENSCPOG00000036684	TNRC6A	100	96.122	Cavia_porcellus
ENSCCAG00000033664	TNRC6A	99	98.739	ENSCATG00000019284	TNRC6A	99	98.739	Cercocebus_atys
ENSCCAG00000033664	TNRC6A	100	91.623	ENSCLAG00000010217	TNRC6A	100	91.571	Chinchilla_lanigera
ENSCCAG00000033664	TNRC6A	100	99.184	ENSCSAG00000006561	TNRC6A	100	99.184	Chlorocebus_sabaeus
ENSCCAG00000033664	TNRC6A	95	91.831	ENSCHOG00000009374	TNRC6A	95	91.831	Choloepus_hoffmanni
ENSCCAG00000033664	TNRC6A	90	82.159	ENSCPBG00000001881	TNRC6A	99	82.159	Chrysemys_picta_bellii
ENSCCAG00000033664	TNRC6A	100	99.031	ENSCANG00000041549	TNRC6A	100	99.031	Colobus_angolensis_palliatus
ENSCCAG00000033664	TNRC6A	100	94.610	ENSCGRG00001015021	Tnrc6a	100	94.401	Cricetulus_griseus_chok1gshd
ENSCCAG00000033664	TNRC6A	99	93.819	ENSCGRG00000013351	Tnrc6a	99	93.714	Cricetulus_griseus_crigri
ENSCCAG00000033664	TNRC6A	92	56.196	ENSDARG00000079688	tnrc6a	99	56.614	Danio_rerio
ENSCCAG00000033664	TNRC6A	99	93.633	ENSDNOG00000013989	TNRC6A	99	93.841	Dasypus_novemcinctus
ENSCCAG00000033664	TNRC6A	99	85.243	ENSETEG00000014658	TNRC6A	99	85.400	Echinops_telfairi
ENSCCAG00000033664	TNRC6A	100	96.480	ENSEASG00005017693	TNRC6A	100	96.774	Equus_asinus_asinus
ENSCCAG00000033664	TNRC6A	100	96.480	ENSECAG00000025056	TNRC6A	100	96.774	Equus_caballus
ENSCCAG00000033664	TNRC6A	99	89.191	ENSEEUG00000004530	TNRC6A	99	89.399	Erinaceus_europaeus
ENSCCAG00000033664	TNRC6A	100	95.406	ENSFCAG00000025236	TNRC6A	100	95.457	Felis_catus
ENSCCAG00000033664	TNRC6A	99	79.029	ENSFALG00000003757	TNRC6A	99	79.748	Ficedula_albicollis
ENSCCAG00000033664	TNRC6A	92	80.213	ENSGALG00000006068	TNRC6A	99	82.594	Gallus_gallus
ENSCCAG00000033664	TNRC6A	90	81.369	ENSGAGG00000023209	TNRC6A	99	81.656	Gopherus_agassizii
ENSCCAG00000033664	TNRC6A	99	98.767	ENSGGOG00000005137	TNRC6A	99	98.767	Gorilla_gorilla
ENSCCAG00000033664	TNRC6A	99	94.223	ENSHGLG00000012474	-	100	94.013	Heterocephalus_glaber_female
ENSCCAG00000033664	TNRC6A	100	72.475	ENSHGLG00000007368	-	99	72.057	Heterocephalus_glaber_female
ENSCCAG00000033664	TNRC6A	99	93.540	ENSHGLG00100012496	-	100	93.487	Heterocephalus_glaber_male
ENSCCAG00000033664	TNRC6A	99	96.283	ENSSTOG00000023394	TNRC6A	99	96.283	Ictidomys_tridecemlineatus
ENSCCAG00000033664	TNRC6A	99	69.179	ENSLACG00000006277	TNRC6A	100	70.212	Latimeria_chalumnae
ENSCCAG00000033664	TNRC6A	99	83.223	ENSLOCG00000005517	tnrc6a	93	83.223	Lepisosteus_oculatus
ENSCCAG00000033664	TNRC6A	98	94.474	ENSLAFG00000004209	TNRC6A	99	94.471	Loxodonta_africana
ENSCCAG00000033664	TNRC6A	99	97.711	ENSMFAG00000003824	TNRC6A	99	97.763	Macaca_fascicularis
ENSCCAG00000033664	TNRC6A	100	98.979	ENSMMUG00000020428	TNRC6A	100	98.979	Macaca_mulatta
ENSCCAG00000033664	TNRC6A	100	98.730	ENSMNEG00000034854	TNRC6A	100	98.730	Macaca_nemestrina
ENSCCAG00000033664	TNRC6A	100	95.933	ENSMLEG00000042737	TNRC6A	99	95.933	Mandrillus_leucophaeus
ENSCCAG00000033664	TNRC6A	99	80.031	ENSMGAG00000006455	TNRC6A	99	80.233	Meleagris_gallopavo
ENSCCAG00000033664	TNRC6A	100	94.244	ENSMAUG00000012750	Tnrc6a	100	94.139	Mesocricetus_auratus
ENSCCAG00000033664	TNRC6A	100	97.808	ENSMICG00000030685	TNRC6A	100	97.808	Microcebus_murinus
ENSCCAG00000033664	TNRC6A	100	94.974	ENSMOCG00000000152	Tnrc6a	100	94.764	Microtus_ochrogaster
ENSCCAG00000033664	TNRC6A	99	81.767	ENSMODG00000016348	TNRC6A	99	81.728	Monodelphis_domestica
ENSCCAG00000033664	TNRC6A	99	93.238	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	94.568	Mus_caroli
ENSCCAG00000033664	TNRC6A	100	93.822	ENSMUSG00000052707	Tnrc6a	99	94.925	Mus_musculus
ENSCCAG00000033664	TNRC6A	99	93.981	MGP_PahariEiJ_G0013635	Tnrc6a	100	95.211	Mus_pahari
ENSCCAG00000033664	TNRC6A	100	93.874	MGP_SPRETEiJ_G0031539	Tnrc6a	100	94.925	Mus_spretus
ENSCCAG00000033664	TNRC6A	97	84.148	ENSMPUG00000012324	TNRC6A	100	84.095	Mustela_putorius_furo
ENSCCAG00000033664	TNRC6A	99	92.703	ENSMLUG00000002701	TNRC6A	100	92.756	Myotis_lucifugus
ENSCCAG00000033664	TNRC6A	99	95.547	ENSNGAG00000020702	Tnrc6a	100	95.495	Nannospalax_galili
ENSCCAG00000033664	TNRC6A	99	96.210	ENSNLEG00000011851	TNRC6A	99	96.434	Nomascus_leucogenys
ENSCCAG00000033664	TNRC6A	77	89.037	ENSMEUG00000015959	-	77	89.037	Notamacropus_eugenii
ENSCCAG00000033664	TNRC6A	96	99.627	ENSOPRG00000005819	TNRC6A	96	99.627	Ochotona_princeps
ENSCCAG00000033664	TNRC6A	99	89.735	ENSODEG00000012802	TNRC6A	99	89.418	Octodon_degus
ENSCCAG00000033664	TNRC6A	88	83.082	ENSOANG00000007672	TNRC6A	99	83.081	Ornithorhynchus_anatinus
ENSCCAG00000033664	TNRC6A	99	93.127	ENSOCUG00000004325	TNRC6A	100	93.127	Oryctolagus_cuniculus
ENSCCAG00000033664	TNRC6A	99	97.068	ENSOGAG00000006666	TNRC6A	100	97.068	Otolemur_garnettii
ENSCCAG00000033664	TNRC6A	99	94.151	ENSOARG00000017950	TNRC6A	100	93.740	Ovis_aries
ENSCCAG00000033664	TNRC6A	99	98.779	ENSPPAG00000028379	TNRC6A	100	98.779	Pan_paniscus
ENSCCAG00000033664	TNRC6A	100	95.406	ENSPPRG00000005861	TNRC6A	100	95.457	Panthera_pardus
ENSCCAG00000033664	TNRC6A	99	94.238	ENSPTIG00000006346	TNRC6A	99	94.289	Panthera_tigris_altaica
ENSCCAG00000033664	TNRC6A	99	98.233	ENSPTRG00000007898	TNRC6A	99	98.233	Pan_troglodytes
ENSCCAG00000033664	TNRC6A	100	96.692	ENSPANG00000018523	TNRC6A	100	96.692	Papio_anubis
ENSCCAG00000033664	TNRC6A	88	75.862	ENSPKIG00000012859	tnrc6a	96	79.459	Paramormyrops_kingsleyae
ENSCCAG00000033664	TNRC6A	77	77.568	ENSPSIG00000003965	TNRC6A	100	77.568	Pelodiscus_sinensis
ENSCCAG00000033664	TNRC6A	100	94.503	ENSPEMG00000016318	Tnrc6a	100	94.706	Peromyscus_maniculatus_bairdii
ENSCCAG00000033664	TNRC6A	99	83.403	ENSPCIG00000012106	TNRC6A	100	83.577	Phascolarctos_cinereus
ENSCCAG00000033664	TNRC6A	99	98.267	ENSPPYG00000007202	TNRC6A	100	98.267	Pongo_abelii
ENSCCAG00000033664	TNRC6A	95	100.000	ENSPCAG00000008260	TNRC6A	94	100.000	Procavia_capensis
ENSCCAG00000033664	TNRC6A	100	95.512	ENSPCOG00000010134	TNRC6A	100	95.512	Propithecus_coquereli
ENSCCAG00000033664	TNRC6A	89	70.962	ENSPVAG00000012066	TNRC6A	99	70.733	Pteropus_vampyrus
ENSCCAG00000033664	TNRC6A	100	94.053	ENSRNOG00000024737	Tnrc6a	100	93.949	Rattus_norvegicus
ENSCCAG00000033664	TNRC6A	99	99.172	ENSRBIG00000014222	TNRC6A	100	99.172	Rhinopithecus_bieti
ENSCCAG00000033664	TNRC6A	100	99.030	ENSRROG00000032360	TNRC6A	100	99.030	Rhinopithecus_roxellana
ENSCCAG00000033664	TNRC6A	99	98.428	ENSSBOG00000036197	TNRC6A	100	99.824	Saimiri_boliviensis_boliviensis
ENSCCAG00000033664	TNRC6A	90	83.476	ENSSHAG00000008811	TNRC6A	99	83.932	Sarcophilus_harrisii
ENSCCAG00000033664	TNRC6A	88	65.569	ENSSFOG00015008920	tnrc6a	98	78.004	Scleropages_formosus
ENSCCAG00000033664	TNRC6A	73	83.333	ENSSARG00000002479	TNRC6A	89	82.790	Sorex_araneus
ENSCCAG00000033664	TNRC6A	91	78.219	ENSSPUG00000010525	TNRC6A	100	78.723	Sphenodon_punctatus
ENSCCAG00000033664	TNRC6A	100	96.033	ENSSSCG00000038870	TNRC6A	100	97.542	Sus_scrofa
ENSCCAG00000033664	TNRC6A	99	79.479	ENSTGUG00000006142	TNRC6A	100	80.052	Taeniopygia_guttata
ENSCCAG00000033664	TNRC6A	99	94.093	ENSTBEG00000014965	TNRC6A	100	94.569	Tupaia_belangeri
ENSCCAG00000033664	TNRC6A	94	97.950	ENSTTRG00000002008	TNRC6A	93	97.950	Tursiops_truncatus
ENSCCAG00000033664	TNRC6A	79	95.678	ENSUAMG00000006656	-	93	95.678	Ursus_americanus
ENSCCAG00000033664	TNRC6A	99	96.115	ENSUMAG00000008274	TNRC6A	100	97.349	Ursus_maritimus
ENSCCAG00000033664	TNRC6A	57	85.271	ENSVPAG00000010764	-	57	85.271	Vicugna_pacos
ENSCCAG00000033664	TNRC6A	99	96.500	ENSVVUG00000005380	TNRC6A	100	96.482	Vulpes_vulpes
ENSCCAG00000033664	TNRC6A	96	65.169	ENSXETG00000030437	TNRC6A	99	65.767	Xenopus_tropicalis