EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000033727 (Gene tree)
Gene ID: 108295125
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 64569 bases
Position: chrKV390047.1:745434-810002
Accession: 108295125
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000031490	RRM_1	PF00076.22	3.6e-09	1	1
ENSCCAP00000031510	RRM_1	PF00076.22	4.1e-09	1	1
ENSCCAP00000031475	RRM_1	PF00076.22	4.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000049228	SCAF4-201	4258	XM_017517169	ENSCCAP00000031475	1145 (aa)	XP_017372658	A0A2K5RTN3
ENSCCAT00000049243	SCAF4-202	3393	-	ENSCCAP00000031490	1130 (aa)	-	A0A2K5RTP6
ENSCCAT00000049263	SCAF4-203	3297	-	ENSCCAP00000031510	1098 (aa)	-	A0A2K5RTR5

Gene Model

Click here to download ENSCCAG00000033727's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000033727's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000033727	SCAF4	100	98.518	ENSG00000156304	SCAF4	100	98.518	Homo_sapiens
ENSCCAG00000033727	SCAF4	63	50.000	ENSAPOG00000019615	scaf4b	58	66.497	Acanthochromis_polyacanthus
ENSCCAG00000033727	SCAF4	73	93.253	ENSAMEG00000014987	SCAF4	96	93.855	Ailuropoda_melanoleuca
ENSCCAG00000033727	SCAF4	78	50.720	ENSAPEG00000021229	scaf4a	51	56.021	Amphiprion_percula
ENSCCAG00000033727	SCAF4	99	75.631	ENSAPLG00000002509	SCAF4	59	83.589	Anas_platyrhynchos
ENSCCAG00000033727	SCAF4	97	72.195	ENSACAG00000002569	SCAF4	52	84.146	Anolis_carolinensis
ENSCCAG00000033727	SCAF4	100	99.042	ENSANAG00000037494	SCAF4	100	99.042	Aotus_nancymaae
ENSCCAG00000033727	SCAF4	93	49.821	ENSAMXG00000008585	scaf4a	60	62.896	Astyanax_mexicanus
ENSCCAG00000033727	SCAF4	100	92.857	ENSBTAG00000018855	SCAF4	100	92.334	Bos_taurus
ENSCCAG00000033727	SCAF4	100	99.043	ENSCJAG00000008993	SCAF4	100	99.043	Callithrix_jacchus
ENSCCAG00000033727	SCAF4	99	94.459	ENSCAFG00000008863	SCAF4	99	94.459	Canis_familiaris
ENSCCAG00000033727	SCAF4	99	91.943	ENSCAFG00020026019	SCAF4	100	93.880	Canis_lupus_dingo
ENSCCAG00000033727	SCAF4	100	92.448	ENSCHIG00000008385	SCAF4	100	91.580	Capra_hircus
ENSCCAG00000033727	SCAF4	91	96.591	ENSTSYG00000011344	SCAF4	99	96.591	Carlito_syrichta
ENSCCAG00000033727	SCAF4	100	89.310	ENSCPOG00000012443	SCAF4	100	89.828	Cavia_porcellus
ENSCCAG00000033727	SCAF4	100	97.400	ENSCATG00000030379	SCAF4	100	97.400	Cercocebus_atys
ENSCCAG00000033727	SCAF4	99	90.799	ENSCLAG00000006298	SCAF4	100	91.233	Chinchilla_lanigera
ENSCCAG00000033727	SCAF4	100	97.741	ENSCSAG00000009438	SCAF4	100	97.741	Chlorocebus_sabaeus
ENSCCAG00000033727	SCAF4	100	98.255	ENSCANG00000029847	SCAF4	100	98.255	Colobus_angolensis_palliatus
ENSCCAG00000033727	SCAF4	95	91.450	ENSCGRG00001020821	Scaf4	100	82.670	Cricetulus_griseus_chok1gshd
ENSCCAG00000033727	SCAF4	99	82.919	ENSCGRG00000014360	Scaf4	99	86.248	Cricetulus_griseus_crigri
ENSCCAG00000033727	SCAF4	79	52.335	ENSCSEG00000019549	scaf4a	53	55.000	Cynoglossus_semilaevis
ENSCCAG00000033727	SCAF4	58	55.822	ENSCSEG00000012808	-	61	60.500	Cynoglossus_semilaevis
ENSCCAG00000033727	SCAF4	78	52.799	ENSDARG00000077093	scaf4a	56	61.075	Danio_rerio
ENSCCAG00000033727	SCAF4	100	90.314	ENSDNOG00000019014	SCAF4	94	90.052	Dasypus_novemcinctus
ENSCCAG00000033727	SCAF4	92	97.436	ENSETEG00000000583	SCAF4	94	97.436	Echinops_telfairi
ENSCCAG00000033727	SCAF4	100	95.466	ENSEASG00005007756	SCAF4	100	95.466	Equus_asinus_asinus
ENSCCAG00000033727	SCAF4	100	95.557	ENSECAG00000014248	SCAF4	100	95.557	Equus_caballus
ENSCCAG00000033727	SCAF4	59	53.041	ENSELUG00000002779	SCAF8	61	68.116	Esox_lucius
ENSCCAG00000033727	SCAF4	100	92.789	ENSFCAG00000002228	SCAF4	100	92.615	Felis_catus
ENSCCAG00000033727	SCAF4	99	89.646	ENSFDAG00000017780	SCAF4	100	89.560	Fukomys_damarensis
ENSCCAG00000033727	SCAF4	57	61.154	ENSFHEG00000017866	scaf4a	50	60.000	Fundulus_heteroclitus
ENSCCAG00000033727	SCAF4	50	57.519	ENSFHEG00000007634	scaf4b	55	71.519	Fundulus_heteroclitus
ENSCCAG00000033727	SCAF4	100	76.603	ENSGALG00000033965	SCAF4	59	83.817	Gallus_gallus
ENSCCAG00000033727	SCAF4	83	47.680	ENSGACG00000020580	scaf4a	53	70.122	Gasterosteus_aculeatus
ENSCCAG00000033727	SCAF4	91	95.317	ENSGGOG00000015557	SCAF4	100	98.628	Gorilla_gorilla
ENSCCAG00000033727	SCAF4	100	90.948	ENSHGLG00000010582	SCAF4	100	91.466	Heterocephalus_glaber_female
ENSCCAG00000033727	SCAF4	99	90.838	ENSHGLG00100009441	SCAF4	100	91.361	Heterocephalus_glaber_male
ENSCCAG00000033727	SCAF4	69	49.770	ENSIPUG00000011285	scaf4	63	63.308	Ictalurus_punctatus
ENSCCAG00000033727	SCAF4	94	94.962	ENSSTOG00000004450	SCAF4	100	87.355	Ictidomys_tridecemlineatus
ENSCCAG00000033727	SCAF4	99	89.534	ENSJJAG00000019447	Scaf4	99	89.886	Jaculus_jaculus
ENSCCAG00000033727	SCAF4	98	60.281	ENSLACG00000013913	SCAF4	59	70.978	Latimeria_chalumnae
ENSCCAG00000033727	SCAF4	96	57.504	ENSLOCG00000009162	scaf4a	59	67.756	Lepisosteus_oculatus
ENSCCAG00000033727	SCAF4	99	93.300	ENSLAFG00000010710	SCAF4	100	92.025	Loxodonta_africana
ENSCCAG00000033727	SCAF4	100	97.576	ENSMFAG00000037668	SCAF4	100	97.576	Macaca_fascicularis
ENSCCAG00000033727	SCAF4	100	97.489	ENSMMUG00000001712	SCAF4	100	97.489	Macaca_mulatta
ENSCCAG00000033727	SCAF4	100	97.405	ENSMNEG00000032966	SCAF4	100	97.405	Macaca_nemestrina
ENSCCAG00000033727	SCAF4	99	97.550	ENSMLEG00000039674	SCAF4	100	97.550	Mandrillus_leucophaeus
ENSCCAG00000033727	SCAF4	99	76.414	ENSMGAG00000014515	SCAF4	59	83.746	Meleagris_gallopavo
ENSCCAG00000033727	SCAF4	99	88.536	ENSMAUG00000013307	Scaf4	100	88.801	Mesocricetus_auratus
ENSCCAG00000033727	SCAF4	100	97.031	ENSMICG00000005256	SCAF4	100	97.031	Microcebus_murinus
ENSCCAG00000033727	SCAF4	95	91.908	ENSMOCG00000012087	Scaf4	95	91.818	Microtus_ochrogaster
ENSCCAG00000033727	SCAF4	100	84.930	ENSMODG00000021040	SCAF4	100	83.972	Monodelphis_domestica
ENSCCAG00000033727	SCAF4	100	83.837	MGP_CAROLIEiJ_G0020944	Scaf4	95	89.859	Mus_caroli
ENSCCAG00000033727	SCAF4	100	83.210	ENSMUSG00000022983	Scaf4	95	89.548	Mus_musculus
ENSCCAG00000033727	SCAF4	95	88.889	MGP_PahariEiJ_G0016649	Scaf4	100	86.667	Mus_pahari
ENSCCAG00000033727	SCAF4	100	83.662	MGP_SPRETEiJ_G0021850	Scaf4	100	85.851	Mus_spretus
ENSCCAG00000033727	SCAF4	100	91.941	ENSMPUG00000001078	SCAF4	100	92.201	Mustela_putorius_furo
ENSCCAG00000033727	SCAF4	99	77.352	ENSMLUG00000011472	SCAF4	99	77.554	Myotis_lucifugus
ENSCCAG00000033727	SCAF4	99	91.045	ENSNGAG00000005214	Scaf4	99	91.156	Nannospalax_galili
ENSCCAG00000033727	SCAF4	100	98.345	ENSNLEG00000003569	SCAF4	100	98.345	Nomascus_leucogenys
ENSCCAG00000033727	SCAF4	83	94.410	ENSOPRG00000007016	SCAF4	77	89.130	Ochotona_princeps
ENSCCAG00000033727	SCAF4	98	91.636	ENSODEG00000002718	SCAF4	100	88.879	Octodon_degus
ENSCCAG00000033727	SCAF4	71	58.673	ENSONIG00000004687	scaf4a	51	73.780	Oreochromis_niloticus
ENSCCAG00000033727	SCAF4	100	88.841	ENSOCUG00000008336	SCAF4	100	89.100	Oryctolagus_cuniculus
ENSCCAG00000033727	SCAF4	50	61.883	ENSORLG00000003420	scaf4b	67	58.650	Oryzias_latipes
ENSCCAG00000033727	SCAF4	99	89.224	ENSOGAG00000014653	SCAF4	94	95.328	Otolemur_garnettii
ENSCCAG00000033727	SCAF4	99	91.871	ENSOARG00000013894	SCAF4	99	90.783	Ovis_aries
ENSCCAG00000033727	SCAF4	100	98.518	ENSPPAG00000028535	SCAF4	100	98.518	Pan_paniscus
ENSCCAG00000033727	SCAF4	99	93.152	ENSPPRG00000000635	SCAF4	100	92.976	Panthera_pardus
ENSCCAG00000033727	SCAF4	99	91.101	ENSPTIG00000021578	SCAF4	99	89.956	Panthera_tigris_altaica
ENSCCAG00000033727	SCAF4	100	98.518	ENSPTRG00000013848	SCAF4	100	98.518	Pan_troglodytes
ENSCCAG00000033727	SCAF4	100	97.576	ENSPANG00000017332	SCAF4	100	97.576	Papio_anubis
ENSCCAG00000033727	SCAF4	64	64.333	ENSPKIG00000022408	scaf4a	90	66.766	Paramormyrops_kingsleyae
ENSCCAG00000033727	SCAF4	99	76.930	ENSPSIG00000014242	SCAF4	57	84.496	Pelodiscus_sinensis
ENSCCAG00000033727	SCAF4	61	87.356	ENSPCIG00000028183	SCAF4	91	82.115	Phascolarctos_cinereus
ENSCCAG00000033727	SCAF4	100	98.519	ENSPPYG00000011355	SCAF4	100	98.519	Pongo_abelii
ENSCCAG00000033727	SCAF4	100	95.135	ENSPCOG00000018710	SCAF4	100	94.440	Propithecus_coquereli
ENSCCAG00000033727	SCAF4	100	93.188	ENSPVAG00000005220	SCAF4	100	93.013	Pteropus_vampyrus
ENSCCAG00000033727	SCAF4	76	57.658	ENSPNAG00000016892	scaf4a	60	63.718	Pygocentrus_nattereri
ENSCCAG00000033727	SCAF4	98	88.000	ENSRNOG00000002104	Scaf4	95	85.897	Rattus_norvegicus
ENSCCAG00000033727	SCAF4	99	95.610	ENSRBIG00000040007	SCAF4	99	95.610	Rhinopithecus_bieti
ENSCCAG00000033727	SCAF4	100	98.342	ENSRROG00000029488	SCAF4	100	98.342	Rhinopithecus_roxellana
ENSCCAG00000033727	SCAF4	100	84.468	ENSSHAG00000001581	SCAF4	100	83.246	Sarcophilus_harrisii
ENSCCAG00000033727	SCAF4	67	53.359	ENSSFOG00015006338	scaf4a	54	57.963	Scleropages_formosus
ENSCCAG00000033727	SCAF4	67	56.569	ENSSMAG00000003738	scaf4b	54	71.519	Scophthalmus_maximus
ENSCCAG00000033727	SCAF4	75	47.059	ENSSDUG00000012380	scaf4b	54	70.886	Seriola_dumerili
ENSCCAG00000033727	SCAF4	75	47.059	ENSSLDG00000023152	-	54	70.886	Seriola_lalandi_dorsalis
ENSCCAG00000033727	SCAF4	82	52.857	ENSSLDG00000021671	scaf4a	53	61.164	Seriola_lalandi_dorsalis
ENSCCAG00000033727	SCAF4	100	89.601	ENSSARG00000009994	SCAF4	100	88.995	Sorex_araneus
ENSCCAG00000033727	SCAF4	100	90.078	ENSSSCG00000021023	SCAF4	100	90.164	Sus_scrofa
ENSCCAG00000033727	SCAF4	74	72.462	ENSTGUG00000013464	SCAF4	57	86.047	Taeniopygia_guttata
ENSCCAG00000033727	SCAF4	50	59.498	ENSTRUG00000009536	-	65	57.604	Takifugu_rubripes
ENSCCAG00000033727	SCAF4	66	54.717	ENSTNIG00000009945	scaf4a	61	56.930	Tetraodon_nigroviridis
ENSCCAG00000033727	SCAF4	99	92.511	ENSTTRG00000010963	SCAF4	100	92.159	Tursiops_truncatus
ENSCCAG00000033727	SCAF4	100	91.179	ENSUAMG00000008860	SCAF4	100	91.004	Ursus_americanus
ENSCCAG00000033727	SCAF4	99	90.981	ENSUMAG00000016962	SCAF4	100	91.600	Ursus_maritimus
ENSCCAG00000033727	SCAF4	99	94.523	ENSVVUG00000002953	SCAF4	100	94.523	Vulpes_vulpes
ENSCCAG00000033727	SCAF4	99	55.639	ENSXETG00000007351	scaf4	63	66.714	Xenopus_tropicalis