EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000034025 (Gene tree)
Gene ID: 108308047
Gene Symbol: -
Alias: -
Full Name: pentatricopeptide repeat-containing protein 1%2C mitochondrial
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 23355 bases
Position: chrKV389508.1:4715228-4738582
Accession: 108308047
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000031981	PPR	PF01535.20	6.2e-17	1	2
ENSCCAP00000031981	PPR	PF01535.20	6.2e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000049736	-	3146	XM_017533682	ENSCCAP00000031981	701 (aa)	XP_017389171	A0A2K5RV64

Gene Model

Click here to download ENSCCAG00000034025's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000034025's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000034025	-	100	87.216	ENSG00000248919	ATP5MF-PTCD1	93	87.216	Homo_sapiens
ENSCCAG00000034025	-	100	87.216	ENSG00000106246	PTCD1	100	87.216	Homo_sapiens
ENSCCAG00000034025	-	81	46.724	ENSAPOG00000010679	ptcd1	85	47.865	Acanthochromis_polyacanthus
ENSCCAG00000034025	-	100	75.843	ENSAMEG00000006224	-	93	74.719	Ailuropoda_melanoleuca
ENSCCAG00000034025	-	92	46.472	ENSACIG00000017861	ptcd1	85	48.684	Amphilophus_citrinellus
ENSCCAG00000034025	-	84	48.414	ENSAOCG00000020741	-	81	48.739	Amphiprion_ocellaris
ENSCCAG00000034025	-	80	47.636	ENSAOCG00000022617	ptcd1	81	47.972	Amphiprion_ocellaris
ENSCCAG00000034025	-	84	48.247	ENSAPEG00000022632	ptcd1	81	48.571	Amphiprion_percula
ENSCCAG00000034025	-	84	50.000	ENSATEG00000007016	ptcd1	80	49.915	Anabas_testudineus
ENSCCAG00000034025	-	87	59.477	ENSAPLG00000006862	-	95	59.477	Anas_platyrhynchos
ENSCCAG00000034025	-	100	54.149	ENSACAG00000012871	-	93	53.727	Anolis_carolinensis
ENSCCAG00000034025	-	98	94.891	ENSANAG00000035790	-	100	94.891	Aotus_nancymaae
ENSCCAG00000034025	-	84	49.239	ENSACLG00000002824	ptcd1	80	48.826	Astatotilapia_calliptera
ENSCCAG00000034025	-	88	46.802	ENSAMXG00000037292	ptcd1	89	46.406	Astyanax_mexicanus
ENSCCAG00000034025	-	100	76.771	ENSBTAG00000020440	-	87	76.771	Bos_taurus
ENSCCAG00000034025	-	100	94.722	ENSCJAG00000015815	-	100	94.722	Callithrix_jacchus
ENSCCAG00000034025	-	100	76.164	ENSCAFG00000015055	-	93	75.035	Canis_familiaris
ENSCCAG00000034025	-	100	76.164	ENSCAFG00020014480	-	93	75.035	Canis_lupus_dingo
ENSCCAG00000034025	-	100	76.596	ENSCHIG00000027000	-	99	76.596	Capra_hircus
ENSCCAG00000034025	-	100	78.672	ENSTSYG00000029495	-	100	78.672	Carlito_syrichta
ENSCCAG00000034025	-	94	73.293	ENSCAPG00000014660	-	98	73.684	Cavia_aperea
ENSCCAG00000034025	-	100	72.663	ENSCPOG00000001780	-	100	72.663	Cavia_porcellus
ENSCCAG00000034025	-	100	87.376	ENSCATG00000040859	-	100	87.660	Cercocebus_atys
ENSCCAG00000034025	-	98	75.680	ENSCLAG00000006354	-	100	74.930	Chinchilla_lanigera
ENSCCAG00000034025	-	91	88.372	ENSCSAG00000017794	-	95	88.217	Chlorocebus_sabaeus
ENSCCAG00000034025	-	97	54.348	ENSCPBG00000020866	-	97	53.794	Chrysemys_picta_bellii
ENSCCAG00000034025	-	83	32.149	ENSCING00000007717	-	93	32.734	Ciona_intestinalis
ENSCCAG00000034025	-	100	86.525	ENSCANG00000023441	-	100	86.950	Colobus_angolensis_palliatus
ENSCCAG00000034025	-	99	72.688	ENSCGRG00001023686	Ptcd1	99	72.688	Cricetulus_griseus_chok1gshd
ENSCCAG00000034025	-	99	72.136	ENSCGRG00000015031	Ptcd1	99	72.136	Cricetulus_griseus_crigri
ENSCCAG00000034025	-	87	46.667	ENSCSEG00000002378	ptcd1	83	46.875	Cynoglossus_semilaevis
ENSCCAG00000034025	-	86	46.753	ENSCVAG00000003621	ptcd1	88	46.656	Cyprinodon_variegatus
ENSCCAG00000034025	-	84	47.761	ENSCVAG00000015826	ptcd1	81	47.667	Cyprinodon_variegatus
ENSCCAG00000034025	-	87	49.758	ENSDARG00000076176	ptcd1	87	50.409	Danio_rerio
ENSCCAG00000034025	-	100	72.958	ENSDNOG00000009957	-	100	73.315	Dasypus_novemcinctus
ENSCCAG00000034025	-	99	74.170	ENSDORG00000000740	Ptcd1	99	74.026	Dipodomys_ordii
ENSCCAG00000034025	-	93	39.859	ENSEBUG00000014515	ptcd1	99	41.256	Eptatretus_burgeri
ENSCCAG00000034025	-	100	78.541	ENSEASG00005002480	-	100	78.401	Equus_asinus_asinus
ENSCCAG00000034025	-	100	78.682	ENSECAG00000016617	-	100	78.541	Equus_caballus
ENSCCAG00000034025	-	84	48.000	ENSELUG00000016517	ptcd1	82	47.994	Esox_lucius
ENSCCAG00000034025	-	100	76.023	ENSFCAG00000015069	-	100	74.894	Felis_catus
ENSCCAG00000034025	-	94	56.340	ENSFALG00000013803	-	87	60.697	Ficedula_albicollis
ENSCCAG00000034025	-	100	73.729	ENSFDAG00000006393	-	100	73.729	Fukomys_damarensis
ENSCCAG00000034025	-	74	46.617	ENSFHEG00000012491	ptcd1	87	46.617	Fundulus_heteroclitus
ENSCCAG00000034025	-	86	46.787	ENSGMOG00000007639	ptcd1	95	46.787	Gadus_morhua
ENSCCAG00000034025	-	87	59.200	ENSGALG00000004711	-	87	59.520	Gallus_gallus
ENSCCAG00000034025	-	84	47.421	ENSGAFG00000013175	ptcd1	82	47.492	Gambusia_affinis
ENSCCAG00000034025	-	86	48.936	ENSGACG00000016607	ptcd1	92	49.191	Gasterosteus_aculeatus
ENSCCAG00000034025	-	92	53.372	ENSGAGG00000021832	-	84	58.741	Gopherus_agassizii
ENSCCAG00000034025	-	99	88.051	ENSGGOG00000015123	-	99	88.051	Gorilla_gorilla
ENSCCAG00000034025	-	84	49.158	ENSHBUG00000018275	ptcd1	80	49.073	Haplochromis_burtoni
ENSCCAG00000034025	-	100	74.753	ENSHGLG00000017621	-	100	74.048	Heterocephalus_glaber_female
ENSCCAG00000034025	-	100	74.753	ENSHGLG00100007218	-	100	74.048	Heterocephalus_glaber_male
ENSCCAG00000034025	-	84	47.708	ENSHCOG00000010784	ptcd1	82	47.952	Hippocampus_comes
ENSCCAG00000034025	-	100	74.474	ENSSTOG00000001682	-	100	74.474	Ictidomys_tridecemlineatus
ENSCCAG00000034025	-	100	72.380	ENSJJAG00000000319	Ptcd1	100	72.262	Jaculus_jaculus
ENSCCAG00000034025	-	83	48.142	ENSKMAG00000008708	ptcd1	80	48.054	Kryptolebias_marmoratus
ENSCCAG00000034025	-	84	47.049	ENSLBEG00000008061	ptcd1	80	48.142	Labrus_bergylta
ENSCCAG00000034025	-	88	58.147	ENSLACG00000011172	ptcd1	84	58.882	Latimeria_chalumnae
ENSCCAG00000034025	-	93	53.461	ENSLOCG00000004833	ptcd1	94	55.354	Lepisosteus_oculatus
ENSCCAG00000034025	-	100	70.028	ENSLAFG00000002588	-	100	70.168	Loxodonta_africana
ENSCCAG00000034025	-	100	87.376	ENSMFAG00000041324	-	100	87.376	Macaca_fascicularis
ENSCCAG00000034025	-	100	87.234	ENSMMUG00000030408	-	100	87.234	Macaca_mulatta
ENSCCAG00000034025	-	100	87.376	ENSMNEG00000043786	-	100	87.376	Macaca_nemestrina
ENSCCAG00000034025	-	100	66.525	ENSMLEG00000031179	-	100	67.518	Mandrillus_leucophaeus
ENSCCAG00000034025	-	84	49.746	ENSMAMG00000007623	ptcd1	80	49.574	Mastacembelus_armatus
ENSCCAG00000034025	-	84	48.990	ENSMZEG00005012722	ptcd1	80	48.904	Maylandia_zebra
ENSCCAG00000034025	-	99	56.374	ENSMGAG00000004211	-	92	56.516	Meleagris_gallopavo
ENSCCAG00000034025	-	100	77.606	ENSMICG00000017428	-	100	77.606	Microcebus_murinus
ENSCCAG00000034025	-	89	45.325	ENSMMOG00000020243	ptcd1	88	47.039	Mola_mola
ENSCCAG00000034025	-	99	57.880	ENSMODG00000001350	-	99	57.880	Monodelphis_domestica
ENSCCAG00000034025	-	84	50.250	ENSMALG00000018442	ptcd1	80	50.084	Monopterus_albus
ENSCCAG00000034025	-	99	73.458	MGP_CAROLIEiJ_G0028011	Ptcd1	99	72.845	Mus_caroli
ENSCCAG00000034025	-	99	73.458	ENSMUSG00000029624	Ptcd1	99	72.989	Mus_musculus
ENSCCAG00000034025	-	99	73.055	MGP_PahariEiJ_G0024580	Ptcd1	99	72.845	Mus_pahari
ENSCCAG00000034025	-	99	73.745	MGP_SPRETEiJ_G0029012	Ptcd1	99	73.276	Mus_spretus
ENSCCAG00000034025	-	100	74.614	ENSMPUG00000016518	-	100	74.507	Mustela_putorius_furo
ENSCCAG00000034025	-	100	78.401	ENSMLUG00000010994	-	94	78.261	Myotis_lucifugus
ENSCCAG00000034025	-	89	47.327	ENSNBRG00000010079	ptcd1	87	47.452	Neolamprologus_brichardi
ENSCCAG00000034025	-	100	86.063	ENSNLEG00000011060	-	100	88.929	Nomascus_leucogenys
ENSCCAG00000034025	-	97	62.878	ENSMEUG00000006930	-	99	62.104	Notamacropus_eugenii
ENSCCAG00000034025	-	89	75.291	ENSOPRG00000013647	-	89	75.291	Ochotona_princeps
ENSCCAG00000034025	-	84	47.643	ENSONIG00000003168	ptcd1	95	47.555	Oreochromis_niloticus
ENSCCAG00000034025	-	80	57.439	ENSOANG00000007728	-	73	57.719	Ornithorhynchus_anatinus
ENSCCAG00000034025	-	99	73.588	ENSOCUG00000010584	-	98	73.588	Oryctolagus_cuniculus
ENSCCAG00000034025	-	86	48.366	ENSORLG00000009275	ptcd1	85	48.440	Oryzias_latipes
ENSCCAG00000034025	-	86	48.440	ENSORLG00020000988	ptcd1	85	48.515	Oryzias_latipes_hni
ENSCCAG00000034025	-	85	47.791	ENSORLG00015010557	ptcd1	85	47.862	Oryzias_latipes_hsok
ENSCCAG00000034025	-	87	47.419	ENSOMEG00000020627	ptcd1	86	48.000	Oryzias_melastigma
ENSCCAG00000034025	-	99	75.823	ENSOGAG00000010877	-	99	75.107	Otolemur_garnettii
ENSCCAG00000034025	-	100	72.380	ENSOARG00000018676	-	100	72.380	Ovis_aries
ENSCCAG00000034025	-	100	87.358	ENSPPAG00000036024	-	100	87.358	Pan_paniscus
ENSCCAG00000034025	-	100	76.771	ENSPPRG00000003478	-	100	75.779	Panthera_pardus
ENSCCAG00000034025	-	100	87.074	ENSPTRG00000019452	-	100	87.074	Pan_troglodytes
ENSCCAG00000034025	-	100	87.518	ENSPANG00000016730	-	100	87.518	Papio_anubis
ENSCCAG00000034025	-	96	48.480	ENSPKIG00000014215	ptcd1	96	48.830	Paramormyrops_kingsleyae
ENSCCAG00000034025	-	85	58.043	ENSPSIG00000011184	-	100	58.638	Pelodiscus_sinensis
ENSCCAG00000034025	-	73	41.635	ENSPMAG00000009667	ptcd1	100	41.635	Petromyzon_marinus
ENSCCAG00000034025	-	99	57.951	ENSPCIG00000024778	-	99	58.086	Phascolarctos_cinereus
ENSCCAG00000034025	-	84	48.409	ENSPFOG00000004458	ptcd1	82	48.485	Poecilia_formosa
ENSCCAG00000034025	-	84	48.409	ENSPLAG00000011051	ptcd1	82	48.485	Poecilia_latipinna
ENSCCAG00000034025	-	84	48.241	ENSPMEG00000020547	ptcd1	82	48.485	Poecilia_mexicana
ENSCCAG00000034025	-	83	47.059	ENSPREG00000000059	ptcd1	82	46.901	Poecilia_reticulata
ENSCCAG00000034025	-	95	87.838	ENSPPYG00000017377	-	100	87.838	Pongo_abelii
ENSCCAG00000034025	-	82	76.056	ENSPCAG00000001852	-	88	76.056	Procavia_capensis
ENSCCAG00000034025	-	99	79.143	ENSPCOG00000018596	-	99	79.000	Propithecus_coquereli
ENSCCAG00000034025	-	67	86.000	ENSPVAG00000007529	-	72	86.000	Pteropus_vampyrus
ENSCCAG00000034025	-	84	48.653	ENSPNYG00000019993	ptcd1	80	48.567	Pundamilia_nyererei
ENSCCAG00000034025	-	89	50.475	ENSPNAG00000014931	ptcd1	90	49.131	Pygocentrus_nattereri
ENSCCAG00000034025	-	99	73.027	ENSRNOG00000000987	Ptcd1	99	72.911	Rattus_norvegicus
ENSCCAG00000034025	-	100	86.809	ENSRBIG00000043393	-	100	87.234	Rhinopithecus_bieti
ENSCCAG00000034025	-	100	86.525	ENSRROG00000036420	-	100	86.950	Rhinopithecus_roxellana
ENSCCAG00000034025	-	100	94.294	ENSSBOG00000024114	-	100	94.294	Saimiri_boliviensis_boliviensis
ENSCCAG00000034025	-	99	56.815	ENSSHAG00000011376	-	97	61.905	Sarcophilus_harrisii
ENSCCAG00000034025	-	87	52.623	ENSSFOG00015007909	ptcd1	83	52.941	Scleropages_formosus
ENSCCAG00000034025	-	84	46.880	ENSSMAG00000000218	ptcd1	93	46.205	Scophthalmus_maximus
ENSCCAG00000034025	-	87	47.488	ENSSDUG00000015671	ptcd1	86	47.471	Seriola_dumerili
ENSCCAG00000034025	-	87	47.974	ENSSLDG00000014261	ptcd1	86	47.961	Seriola_lalandi_dorsalis
ENSCCAG00000034025	-	97	53.434	ENSSPUG00000003540	-	83	58.937	Sphenodon_punctatus
ENSCCAG00000034025	-	84	49.834	ENSSPAG00000011049	ptcd1	80	49.749	Stegastes_partitus
ENSCCAG00000034025	-	92	78.793	ENSSSCG00000007622	-	97	78.638	Sus_scrofa
ENSCCAG00000034025	-	88	60.130	ENSTGUG00000007563	-	99	61.020	Taeniopygia_guttata
ENSCCAG00000034025	-	89	47.377	ENSTRUG00000013471	ptcd1	82	47.720	Takifugu_rubripes
ENSCCAG00000034025	-	88	47.923	ENSTNIG00000008271	ptcd1	83	49.073	Tetraodon_nigroviridis
ENSCCAG00000034025	-	100	76.271	ENSTBEG00000011021	-	100	75.176	Tupaia_belangeri
ENSCCAG00000034025	-	100	75.461	ENSTTRG00000003006	-	100	75.461	Tursiops_truncatus
ENSCCAG00000034025	-	100	75.983	ENSUAMG00000008049	-	100	75.000	Ursus_americanus
ENSCCAG00000034025	-	99	75.779	ENSVVUG00000008836	-	100	74.788	Vulpes_vulpes
ENSCCAG00000034025	-	92	50.847	ENSXETG00000009891	ptcd1	87	52.467	Xenopus_tropicalis
ENSCCAG00000034025	-	86	47.525	ENSXMAG00000015540	ptcd1	82	48.217	Xiphophorus_maculatus