EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000034048 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 2977 bases
Position: chrKV389653.1:1405459-1408435
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000032064	SF3a60_bindingd	PF12108.8	2.5e-10	1	1
ENSCCAP00000032080	SF3a60_bindingd	PF12108.8	2.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000049820	-	1212	-	ENSCCAP00000032064	403 (aa)	-	A0A2K5RV95
ENSCCAT00000049836	-	1266	-	ENSCCAP00000032080	421 (aa)	-	A0A2K5RVC1

Gene Model

Click here to download ENSCCAG00000034048's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000034048's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000034048	-	100	68.191	ENSCCAG00000033732	SF3A3	100	71.372

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000034048	-	100	68.191	ENSG00000183431	SF3A3	100	71.372	Homo_sapiens
ENSCCAG00000034048	-	100	62.823	ENSAPOG00000015608	sf3a3	100	65.805	Acanthochromis_polyacanthus
ENSCCAG00000034048	-	100	68.191	ENSAMEG00000001262	SF3A3	100	71.372	Ailuropoda_melanoleuca
ENSCCAG00000034048	-	98	61.987	ENSACIG00000009061	sf3a3	98	61.952	Amphilophus_citrinellus
ENSCCAG00000034048	-	100	63.221	ENSAOCG00000013954	sf3a3	100	65.669	Amphiprion_ocellaris
ENSCCAG00000034048	-	100	63.221	ENSAPEG00000007297	sf3a3	100	65.669	Amphiprion_percula
ENSCCAG00000034048	-	100	62.076	ENSATEG00000008754	sf3a3	100	65.070	Anabas_testudineus
ENSCCAG00000034048	-	92	66.030	ENSAPLG00000014900	SF3A3	100	69.427	Anas_platyrhynchos
ENSCCAG00000034048	-	100	65.209	ENSACAG00000017058	SF3A3	100	68.787	Anolis_carolinensis
ENSCCAG00000034048	-	99	64.800	ENSANAG00000014878	SF3A3	100	68.000	Aotus_nancymaae
ENSCCAG00000034048	-	100	68.330	ENSANAG00000036903	-	100	68.330	Aotus_nancymaae
ENSCCAG00000034048	-	100	62.475	ENSACLG00000017977	sf3a3	100	65.469	Astatotilapia_calliptera
ENSCCAG00000034048	-	100	63.221	ENSAMXG00000016855	sf3a3	87	65.469	Astyanax_mexicanus
ENSCCAG00000034048	-	100	67.992	ENSBTAG00000007299	SF3A3	100	71.173	Bos_taurus
ENSCCAG00000034048	-	100	39.721	WBGene00011758	T13H5.4	100	38.767	Caenorhabditis_elegans
ENSCCAG00000034048	-	100	68.191	ENSCJAG00000002176	SF3A3	100	71.372	Callithrix_jacchus
ENSCCAG00000034048	-	100	68.191	ENSCAFG00000000683	-	100	71.372	Canis_familiaris
ENSCCAG00000034048	-	100	68.191	ENSCAFG00000003222	-	100	71.372	Canis_familiaris
ENSCCAG00000034048	-	100	68.191	ENSCAFG00020006186	SF3A3	100	71.372	Canis_lupus_dingo
ENSCCAG00000034048	-	100	67.992	ENSCHIG00000020638	SF3A3	100	71.173	Capra_hircus
ENSCCAG00000034048	-	100	62.227	ENSTSYG00000008417	SF3A3	100	65.408	Carlito_syrichta
ENSCCAG00000034048	-	84	59.409	ENSCAPG00000003466	SF3A3	98	59.409	Cavia_aperea
ENSCCAG00000034048	-	100	67.197	ENSCPOG00000008660	SF3A3	100	71.372	Cavia_porcellus
ENSCCAG00000034048	-	100	68.191	ENSCATG00000043496	SF3A3	100	71.372	Cercocebus_atys
ENSCCAG00000034048	-	98	66.129	ENSCATG00000041660	-	100	64.172	Cercocebus_atys
ENSCCAG00000034048	-	100	56.549	ENSCATG00000043537	-	100	59.170	Cercocebus_atys
ENSCCAG00000034048	-	100	66.998	ENSCLAG00000010838	SF3A3	100	71.173	Chinchilla_lanigera
ENSCCAG00000034048	-	98	68.534	ENSCSAG00000001120	SF3A3	99	72.516	Chlorocebus_sabaeus
ENSCCAG00000034048	-	70	67.730	ENSCPBG00000007472	-	79	67.730	Chrysemys_picta_bellii
ENSCCAG00000034048	-	100	63.522	ENSCPBG00000018291	-	100	66.876	Chrysemys_picta_bellii
ENSCCAG00000034048	-	100	50.398	ENSCING00000002730	-	62	48.544	Ciona_intestinalis
ENSCCAG00000034048	-	100	50.100	ENSCSAVG00000005063	-	100	51.303	Ciona_savignyi
ENSCCAG00000034048	-	100	68.191	ENSCANG00000042083	SF3A3	100	71.372	Colobus_angolensis_palliatus
ENSCCAG00000034048	-	100	62.108	ENSCANG00000035535	-	100	61.969	Colobus_angolensis_palliatus
ENSCCAG00000034048	-	100	66.998	ENSCGRG00001011320	Sf3a3	100	71.173	Cricetulus_griseus_chok1gshd
ENSCCAG00000034048	-	100	66.998	ENSCGRG00000012156	Sf3a3	100	71.173	Cricetulus_griseus_crigri
ENSCCAG00000034048	-	98	64.237	ENSCSEG00000010401	sf3a3	100	64.072	Cynoglossus_semilaevis
ENSCCAG00000034048	-	92	61.146	ENSCVAG00000010239	sf3a3	95	63.753	Cyprinodon_variegatus
ENSCCAG00000034048	-	100	63.221	ENSDARG00000100114	sf3a3	100	65.805	Danio_rerio
ENSCCAG00000034048	-	98	68.467	ENSDNOG00000046628	SF3A3	100	71.367	Dasypus_novemcinctus
ENSCCAG00000034048	-	100	66.998	ENSDORG00000008798	Sf3a3	100	71.173	Dipodomys_ordii
ENSCCAG00000034048	-	100	48.527	FBgn0014366	noi	100	48.024	Drosophila_melanogaster
ENSCCAG00000034048	-	100	58.218	ENSEBUG00000015411	sf3a3	92	58.416	Eptatretus_burgeri
ENSCCAG00000034048	-	100	68.191	ENSEASG00005012906	SF3A3	100	72.690	Equus_asinus_asinus
ENSCCAG00000034048	-	100	68.191	ENSECAG00000017333	SF3A3	100	71.372	Equus_caballus
ENSCCAG00000034048	-	100	61.078	ENSELUG00000010024	sf3a3	100	64.072	Esox_lucius
ENSCCAG00000034048	-	100	68.191	ENSFCAG00000027772	SF3A3	100	71.372	Felis_catus
ENSCCAG00000034048	-	100	66.600	ENSFALG00000001003	SF3A3	100	69.781	Ficedula_albicollis
ENSCCAG00000034048	-	100	67.197	ENSFDAG00000020908	SF3A3	100	71.372	Fukomys_damarensis
ENSCCAG00000034048	-	100	61.630	ENSFHEG00000019107	sf3a3	100	64.612	Fundulus_heteroclitus
ENSCCAG00000034048	-	100	62.624	ENSGMOG00000015540	sf3a3	100	65.010	Gadus_morhua
ENSCCAG00000034048	-	100	66.799	ENSGALG00000001540	SF3A3	100	69.980	Gallus_gallus
ENSCCAG00000034048	-	100	61.477	ENSGAFG00000002320	sf3a3	100	64.471	Gambusia_affinis
ENSCCAG00000034048	-	100	62.475	ENSGACG00000007842	sf3a3	100	65.269	Gasterosteus_aculeatus
ENSCCAG00000034048	-	100	66.402	ENSGAGG00000014980	SF3A3	100	69.583	Gopherus_agassizii
ENSCCAG00000034048	-	100	68.191	ENSGGOG00000013928	SF3A3	100	71.372	Gorilla_gorilla
ENSCCAG00000034048	-	100	56.212	ENSGGOG00000022611	-	77	92.308	Gorilla_gorilla
ENSCCAG00000034048	-	100	62.475	ENSHBUG00000018158	sf3a3	100	65.469	Haplochromis_burtoni
ENSCCAG00000034048	-	100	70.528	ENSHGLG00000012502	SF3A3	100	71.571	Heterocephalus_glaber_female
ENSCCAG00000034048	-	100	70.528	ENSHGLG00100010546	SF3A3	100	71.571	Heterocephalus_glaber_male
ENSCCAG00000034048	-	100	60.279	ENSHCOG00000015109	sf3a3	100	63.273	Hippocampus_comes
ENSCCAG00000034048	-	100	62.823	ENSIPUG00000011603	sf3a3	100	65.408	Ictalurus_punctatus
ENSCCAG00000034048	-	100	67.197	ENSSTOG00000001691	SF3A3	100	71.372	Ictidomys_tridecemlineatus
ENSCCAG00000034048	-	100	66.998	ENSJJAG00000012404	Sf3a3	100	71.173	Jaculus_jaculus
ENSCCAG00000034048	-	100	61.477	ENSKMAG00000007632	sf3a3	100	64.471	Kryptolebias_marmoratus
ENSCCAG00000034048	-	100	57.937	ENSLBEG00000000816	sf3a3	100	60.558	Labrus_bergylta
ENSCCAG00000034048	-	100	64.016	ENSLOCG00000003273	sf3a3	100	66.998	Lepisosteus_oculatus
ENSCCAG00000034048	-	100	61.224	ENSLAFG00000008094	SF3A3	100	61.224	Loxodonta_africana
ENSCCAG00000034048	-	100	68.191	ENSMFAG00000043047	SF3A3	100	71.372	Macaca_fascicularis
ENSCCAG00000034048	-	98	58.186	ENSMFAG00000036706	-	100	61.957	Macaca_fascicularis
ENSCCAG00000034048	-	100	60.970	ENSMMUG00000038820	-	100	63.158	Macaca_mulatta
ENSCCAG00000034048	-	100	68.191	ENSMMUG00000023199	SF3A3	100	71.372	Macaca_mulatta
ENSCCAG00000034048	-	98	64.387	ENSMNEG00000028686	-	100	65.509	Macaca_nemestrina
ENSCCAG00000034048	-	100	68.191	ENSMNEG00000044291	SF3A3	100	71.372	Macaca_nemestrina
ENSCCAG00000034048	-	100	62.628	ENSMLEG00000036714	-	100	64.549	Mandrillus_leucophaeus
ENSCCAG00000034048	-	80	80.000	ENSMLEG00000028631	-	100	58.681	Mandrillus_leucophaeus
ENSCCAG00000034048	-	100	68.191	ENSMLEG00000030641	SF3A3	100	71.372	Mandrillus_leucophaeus
ENSCCAG00000034048	-	100	62.624	ENSMAMG00000001942	sf3a3	100	65.269	Mastacembelus_armatus
ENSCCAG00000034048	-	100	62.475	ENSMZEG00005016987	sf3a3	100	65.469	Maylandia_zebra
ENSCCAG00000034048	-	100	62.178	ENSMGAG00000002875	SF3A3	100	65.347	Meleagris_gallopavo
ENSCCAG00000034048	-	100	69.672	ENSMICG00000043548	-	100	71.311	Microcebus_murinus
ENSCCAG00000034048	-	100	74.948	ENSMICG00000001485	-	100	74.948	Microcebus_murinus
ENSCCAG00000034048	-	97	68.653	ENSMICG00000026541	-	100	71.965	Microcebus_murinus
ENSCCAG00000034048	-	100	63.817	ENSMOCG00000019939	-	100	67.992	Microtus_ochrogaster
ENSCCAG00000034048	-	94	63.214	ENSMOCG00000014565	-	58	68.641	Microtus_ochrogaster
ENSCCAG00000034048	-	100	62.275	ENSMMOG00000014307	sf3a3	100	65.269	Mola_mola
ENSCCAG00000034048	-	100	56.809	ENSMODG00000017729	-	69	81.579	Monodelphis_domestica
ENSCCAG00000034048	-	100	64.811	ENSMODG00000024045	-	100	66.799	Monodelphis_domestica
ENSCCAG00000034048	-	100	62.425	ENSMALG00000004836	sf3a3	100	65.070	Monopterus_albus
ENSCCAG00000034048	-	100	66.998	MGP_CAROLIEiJ_G0026449	Sf3a3	100	71.173	Mus_caroli
ENSCCAG00000034048	-	100	66.998	ENSMUSG00000028902	Sf3a3	100	71.173	Mus_musculus
ENSCCAG00000034048	-	100	66.183	MGP_PahariEiJ_G0028780	Sf3a3	100	70.539	Mus_pahari
ENSCCAG00000034048	-	100	66.998	MGP_SPRETEiJ_G0027428	Sf3a3	100	71.173	Mus_spretus
ENSCCAG00000034048	-	100	67.793	ENSMLUG00000000991	SF3A3	100	70.974	Myotis_lucifugus
ENSCCAG00000034048	-	100	62.227	ENSNGAG00000018032	Sf3a3	100	66.068	Nannospalax_galili
ENSCCAG00000034048	-	100	66.596	ENSNLEG00000011720	SF3A3	100	69.979	Nomascus_leucogenys
ENSCCAG00000034048	-	100	67.396	ENSOPRG00000012785	SF3A3	100	71.571	Ochotona_princeps
ENSCCAG00000034048	-	100	58.537	ENSODEG00000000937	-	100	61.585	Octodon_degus
ENSCCAG00000034048	-	100	63.895	ENSODEG00000018393	-	92	64.220	Octodon_degus
ENSCCAG00000034048	-	100	69.293	ENSODEG00000006854	-	100	71.515	Octodon_degus
ENSCCAG00000034048	-	100	63.022	ENSODEG00000007470	-	100	67.197	Octodon_degus
ENSCCAG00000034048	-	84	60.970	ENSONIG00000010296	sf3a3	99	64.434	Oreochromis_niloticus
ENSCCAG00000034048	-	92	65.672	ENSOANG00000002473	SF3A3	100	69.083	Ornithorhynchus_anatinus
ENSCCAG00000034048	-	100	67.396	ENSOCUG00000005407	SF3A3	100	71.571	Oryctolagus_cuniculus
ENSCCAG00000034048	-	100	61.277	ENSORLG00000008175	sf3a3	100	64.271	Oryzias_latipes
ENSCCAG00000034048	-	100	61.078	ENSORLG00020013708	sf3a3	100	64.072	Oryzias_latipes_hni
ENSCCAG00000034048	-	100	61.829	ENSORLG00015004104	sf3a3	100	64.811	Oryzias_latipes_hsok
ENSCCAG00000034048	-	100	61.477	ENSOMEG00000020177	sf3a3	100	64.471	Oryzias_melastigma
ENSCCAG00000034048	-	100	67.992	ENSOARG00000019950	SF3A3	100	71.173	Ovis_aries
ENSCCAG00000034048	-	100	58.996	ENSPPAG00000039955	-	77	92.308	Pan_paniscus
ENSCCAG00000034048	-	100	68.191	ENSPPAG00000034066	SF3A3	100	71.400	Pan_paniscus
ENSCCAG00000034048	-	100	68.191	ENSPPRG00000001258	SF3A3	100	71.372	Panthera_pardus
ENSCCAG00000034048	-	100	68.191	ENSPTIG00000007515	SF3A3	100	71.372	Panthera_tigris_altaica
ENSCCAG00000034048	-	100	56.965	ENSPTRG00000046013	-	78	88.462	Pan_troglodytes
ENSCCAG00000034048	-	100	68.191	ENSPTRG00000000559	SF3A3	100	71.372	Pan_troglodytes
ENSCCAG00000034048	-	100	63.093	ENSPANG00000029393	-	100	63.374	Papio_anubis
ENSCCAG00000034048	-	100	59.645	ENSPANG00000031214	-	100	58.785	Papio_anubis
ENSCCAG00000034048	-	100	68.191	ENSPANG00000021859	SF3A3	100	71.372	Papio_anubis
ENSCCAG00000034048	-	100	63.419	ENSPKIG00000004719	sf3a3	100	66.402	Paramormyrops_kingsleyae
ENSCCAG00000034048	-	100	67.921	ENSPSIG00000004273	SF3A3	100	67.921	Pelodiscus_sinensis
ENSCCAG00000034048	-	99	61.441	ENSPMGG00000003610	sf3a3	97	64.831	Periophthalmus_magnuspinnatus
ENSCCAG00000034048	-	100	66.998	ENSPEMG00000020805	Sf3a3	100	71.173	Peromyscus_maniculatus_bairdii
ENSCCAG00000034048	-	60	59.041	ENSPMAG00000001044	sf3a3	97	59.041	Petromyzon_marinus
ENSCCAG00000034048	-	100	67.396	ENSPCIG00000025719	SF3A3	100	70.577	Phascolarctos_cinereus
ENSCCAG00000034048	-	100	61.677	ENSPFOG00000005284	sf3a3	100	64.671	Poecilia_formosa
ENSCCAG00000034048	-	98	61.688	ENSPLAG00000003979	sf3a3	88	65.393	Poecilia_latipinna
ENSCCAG00000034048	-	80	54.359	ENSPMEG00000021132	sf3a3	87	58.718	Poecilia_mexicana
ENSCCAG00000034048	-	100	61.277	ENSPREG00000013802	sf3a3	100	64.271	Poecilia_reticulata
ENSCCAG00000034048	-	100	65.606	ENSPPYG00000001519	SF3A3	100	68.787	Pongo_abelii
ENSCCAG00000034048	-	100	62.624	ENSPCAG00000010734	SF3A3	100	65.805	Procavia_capensis
ENSCCAG00000034048	-	100	66.667	ENSPCOG00000020389	-	100	69.959	Propithecus_coquereli
ENSCCAG00000034048	-	99	60.408	ENSPCOG00000017131	-	99	59.836	Propithecus_coquereli
ENSCCAG00000034048	-	77	89.412	ENSPVAG00000010158	SF3A3	83	79.630	Pteropus_vampyrus
ENSCCAG00000034048	-	100	62.475	ENSPNYG00000000786	sf3a3	100	65.469	Pundamilia_nyererei
ENSCCAG00000034048	-	100	63.074	ENSPNAG00000010298	sf3a3	100	65.669	Pygocentrus_nattereri
ENSCCAG00000034048	-	100	66.998	ENSRNOG00000007629	Sf3a3	100	71.173	Rattus_norvegicus
ENSCCAG00000034048	-	100	60.475	ENSRBIG00000043833	-	100	60.475	Rhinopithecus_bieti
ENSCCAG00000034048	-	100	68.191	ENSRBIG00000043567	SF3A3	100	71.372	Rhinopithecus_bieti
ENSCCAG00000034048	-	100	62.745	ENSRBIG00000041123	-	100	65.101	Rhinopithecus_bieti
ENSCCAG00000034048	-	98	63.218	ENSRROG00000032346	-	100	63.801	Rhinopithecus_roxellana
ENSCCAG00000034048	-	100	68.191	ENSRROG00000033888	SF3A3	100	71.372	Rhinopithecus_roxellana
ENSCCAG00000034048	-	100	64.059	ENSSBOG00000032688	SF3A3	100	67.442	Saimiri_boliviensis_boliviensis
ENSCCAG00000034048	-	100	71.982	ENSSBOG00000026932	-	100	71.854	Saimiri_boliviensis_boliviensis
ENSCCAG00000034048	-	89	66.154	ENSSHAG00000014530	SF3A3	100	69.670	Sarcophilus_harrisii
ENSCCAG00000034048	-	100	63.419	ENSSFOG00015005975	sf3a3	100	66.402	Scleropages_formosus
ENSCCAG00000034048	-	100	62.475	ENSSMAG00000020213	sf3a3	100	65.469	Scophthalmus_maximus
ENSCCAG00000034048	-	100	59.481	ENSSDUG00000011590	sf3a3	100	62.475	Seriola_dumerili
ENSCCAG00000034048	-	100	62.675	ENSSLDG00000020635	sf3a3	100	65.669	Seriola_lalandi_dorsalis
ENSCCAG00000034048	-	100	65.606	ENSSPUG00000004010	SF3A3	100	69.781	Sphenodon_punctatus
ENSCCAG00000034048	-	100	62.275	ENSSPAG00000018653	sf3a3	100	65.269	Stegastes_partitus
ENSCCAG00000034048	-	100	68.191	ENSSSCG00000003643	SF3A3	100	71.372	Sus_scrofa
ENSCCAG00000034048	-	84	64.073	ENSTGUG00000001466	SF3A3	99	67.735	Taeniopygia_guttata
ENSCCAG00000034048	-	100	61.630	ENSTRUG00000009089	sf3a3	100	64.271	Takifugu_rubripes
ENSCCAG00000034048	-	100	60.636	ENSTNIG00000009800	sf3a3	100	63.618	Tetraodon_nigroviridis
ENSCCAG00000034048	-	100	60.636	ENSTBEG00000007614	SF3A3	100	63.817	Tupaia_belangeri
ENSCCAG00000034048	-	100	67.992	ENSTTRG00000013519	SF3A3	100	71.173	Tursiops_truncatus
ENSCCAG00000034048	-	100	68.191	ENSUAMG00000006134	SF3A3	100	71.372	Ursus_americanus
ENSCCAG00000034048	-	100	68.191	ENSUMAG00000021250	SF3A3	100	71.372	Ursus_maritimus
ENSCCAG00000034048	-	64	72.491	ENSVPAG00000004778	SF3A3	58	73.208	Vicugna_pacos
ENSCCAG00000034048	-	100	65.010	ENSVVUG00000022908	SF3A3	100	68.191	Vulpes_vulpes
ENSCCAG00000034048	-	100	66.004	ENSXETG00000022923	sf3a3	100	66.004	Xenopus_tropicalis
ENSCCAG00000034048	-	100	61.477	ENSXMAG00000017165	sf3a3	100	64.471	Xiphophorus_maculatus